Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq415 118 7e-22 seq482 116 3e-21 seq3 111 1e-19 seq255 95.1 8e-15 seq1 95.1 8e-15 >seq415 Length=3446356 Score = 118 bits (130), Expect = 7e-22 Identities = 155/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||| | | Sbjct 2240987 AATGCAGATATTCGTGAAAACCCTCACTGGGAAAACCATCACTCTCGAGGTTGAGAGCTC 2240928 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | || | ||||| |||||||| ||| | || ||||| | Sbjct 2240927 AGACACCATTGACAATGTCAAGGC-CAAAATCCAAGACAAAGAGGGTATCCCTCCAGACC 2240869 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | | || || |||||||| || || ||||||| ||||| | | || || | Sbjct 2240868 AGCAAAGGCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACCCTTGCGGACTATA 2240809 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || || |||||||| | ||| | ||| Sbjct 2240808 ACATTCAGAAGGAGTCCACCCTCCATCTTGTT 2240777 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||||||||| || || || ||||| ||||| || || | Sbjct 2241442 ATGCAGATTTTCGTGAAAACCCTCACAGGCAAGACTATCACCCTCGAGGTGGAGAGTTCC 2241383 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| |||| | || | | ||||| || || | || |||||||| Sbjct 2241382 GACACTATCGACAATGTTAAGGCCAAGA-TCCAGGACAAGGAGGGGATTCCTCCAGATCA 2241324 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||||||||||||||| || || | || || | | ||| ||||| Sbjct 2241323 GCAAAGGCTTATCTTTGCCGGCAAACAACTCGAGGATGGTCGTACCCTTGCCGACTACAA 2241264 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || ||||| || || || || || ||| Sbjct 2241263 CATCCAGAAAGAATCGACCTTGCACTTGGTT 2241233 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| ||||| ||||| ||||| |||||||| | || || || | | Sbjct 2240303 AATGCAGATTTTCGTGAAAACGCTCACCGGAAAGACGATCACCTTGGAGGTGGAGAGCTC 2240244 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || ||| | || ||| | || | || | || ||||| || ||| | || ||||||| Sbjct 2240243 TGATACTATCGACAATGTGAAGGCCAAGA-TTCAGGACAAGGAGGGTATCCCCCCAGATC 2240185 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || || || || || || |||||||| | | || || | ||||||| Sbjct 2240184 AGCAGAGGCTTATCTTCGCAGGGAAGCAGCTGGAAGATGGGAGGACCTTGGCTGATTACA 2240125 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || ||||||||||| Sbjct 2240124 ACATTCAGAAAGAGTCCAC 2240106 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| ||||| ||||| || ||||| | || ||||| | || Sbjct 2240758 ATGCAGATTTTTGTGAAAACTCTCACCGGAAAGACAATCACCTTGGAGGTTGAAAGCTCG 2240699 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || |||||| ||||| || || | || |||||||| Sbjct 2240698 GATACAATAGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 2240639 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || || || ||||| || || || || ||||| | ||||| | | ||||||||| Sbjct 2240638 CAACGGTTGATCTTTGCAGGTAAGCAGCTTGAAGATGGGCGCACCCTCGCAGATTACAAC 2240579 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 2240578 ATTCAGAAGGAATCTAC 2240562 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || ||||| ||||| || || || || | || Sbjct 2240530 ATGCAGATCTTTGTCAAGACTCTCACAGGGAAAACCATCACCCTTGAGGTCGAAAGCTCG 2240471 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || | || || || || || | || || ||||| Sbjct 2240470 GATACGATCGACAATGTGAAGGCGAAGA-TTCAGGATAAGGAGGGAATCCCCCCGGATCA 2240412 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||||||||| || || || |||| ||||| || | || ||||| Sbjct 2240411 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGGCGCACCTTGGCGGACTACAA 2240352 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| ||| ||| | || ||||| Sbjct 2240351 CATCCAAAAGGAGAGCACTCTCCACTTAGT 2240322 >seq482 Length=739299 Score = 116 bits (128), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || ||||||||||| || ||||| || || || || || ||| Sbjct 128155 AAGATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACGATTACGCTGGAGGTGGAGTCC 128096 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| |||| ||| | || | || ||| ||||| ||||| | || || || Sbjct 128095 TCGGACACCATTGACAATGTCAAGGC-CAAGATTCAGGACAAGGAAGGGATCCCTCCGGA 128037 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||||| ||||| || ||||| || || || ||||| | ||| ||| | | ||||| Sbjct 128036 TCAGCAGCGGTTAATCTTCGCCGGGAAGCAGCTTGAAGATGGACGTACTCTTGCTGATTA 127977 Query 23787 CAACATACAAAAAGAGTCCACATTACAT 23814 ||| || || || || || ||| | ||| Sbjct 127976 CAATATTCAGAAGGAATCTACACTGCAT 127949 >seq3 Length=5347415 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| |||||||| ||||| ||||| || || | Sbjct 3173046 ATGCAGATCTTCGTGAAAACCCTCACAGGAAAAACAATCACCCTCGAGGTGGAAAGTTCC 3172987 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | || || ||||| ||||| | || || ||||| Sbjct 3172986 GACACCATTGACAATGTTAAAGC-CAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCA 3172928 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || ||||||||||| ||||| || || | || || | | ||| ||||| Sbjct 3172927 GCAAAGGCTGATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTTGCCGACTACAA 3172868 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || ||||| || || || || || || Sbjct 3172867 CATCCAGAAAGAATCGACCTTGCACTTGGT 3172838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || ||||| || ||||| ||||| | || || || | | Sbjct 3172363 AATGCAGATCTTCGTGAAGACTCTCACTGGGAAAACAATCACCTTGGAGGTGGAGAGCTC 3172304 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | | || ||| ||| |||||||| || | || || || || Sbjct 3172303 GGACACCATAGACAACGTGAAGGCAAAGATTCAGGACAAAGAGGGGATCCCCCCGGACCA 3172244 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || ||||| || || |||||||| | | ||||| | |||||||| Sbjct 3172243 GCAGAGGCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGCAGGACTTTGGCTGATTACAA 3172184 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 3172183 CATCCAGAAGGAGTCCAC 3172166 >seq255 Length=3424836 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| ||||| ||||| || ||||||||||| || || | | Sbjct 2253652 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACTCTCGAGGTGGAGAGCTCC 2253593 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||| || ||||| || || | || ||||| || Sbjct 2253592 GACACCATCGACAATGTCAAGGC-AAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 2253534 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || || || ||||| | || || || | ||||| || Sbjct 2253533 GCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACCTTGGCGGATTATAA 2253474 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || || ||||||||| Sbjct 2253473 CATCCAGAAGGAGTCCACA 2253455 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || |||||||| || ||||| |||||| | || || || | | Sbjct 2253196 ATGCAGATTTTTGTGAAGACCCTCACCGGGAAAACCATCACTTTGGAGGTCGAAAGCTCC 2253137 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | ||| | |||||| ||||| || || | || || ||||| Sbjct 2253136 GACACCATCGACAATGTGAAAGC-AAAAATCCAGGACAAGGAGGGAATCCCCCCGGATCA 2253078 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || || ||||| || | ||||| | | || ||||| Sbjct 2253077 GCAGAGGCTTATCTTTGCCGGGAAGCAGCTGGAGGATGGGCGCACCCTCGCTGACTACAA 2253018 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || ||| ||| | || || || | ||| || | |||||| Sbjct 2253017 TATCCAGAAGGAGAGCACGCTCCACTTGGTGCTCAGGCTGAGGGGAGGA 2252969 >seq1 Length=8502017 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||||||||| || || ||||| || || ||||| | || Sbjct 7226158 ATGCAGATCTTTGTGAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTTGAAAGCTCG 7226217 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | ||| || || |||||||| || | || ||||| || Sbjct 7226218 GACACTATCGATAACGTCAAAGCGAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 7226277 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || |||||||| || || || || |||| ||||| | | || |||||| Sbjct 7226278 CAGCGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCTGACTACAAC 7226337 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 7226338 ATCCAGAAGGAG 7226349 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| ||||| || ||||| || || || || | | Sbjct 7226613 AATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACCCTGGAGGTGGAGAGCTC 7226672 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || ||||| ||||| || || | || |||||||| Sbjct 7226673 AGACACCATCGACAACGTGAAGGCGAAAATCCAGGACAAGGAGGGGATTCCTCCAGATCA 7226732 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || || || || || | | | || | | |||||||| Sbjct 7226733 GCAGAGGTTGATCTTTGCTGGGAAGCAGCTTGAGGATGGAAGGACCCTTGCTGATTACAA 7226792 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 7226793 CATCCAGAAGGAATCCAC 7226810 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || ||||| |||||||| || || || | | Sbjct 7226386 ATGCAGATCTTTGTGAAGACCCTCACCGGGAAAACCATCACTCTAGAGGTCGAGAGCTCA 7226445 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||||| || || || || | || |||||||| Sbjct 7226446 GACACCATCGACAACGTGAAGGCGAAAATCCAGGATAAGGAGGGCATCCCCCCAGATCAG 7226505 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || || ||||| || || || || |||| ||||| | | ||||||||| Sbjct 7226506 CAGAGATTGATCTTCGCCGGGAAGCAGCTCGAGGACGGGCGCACCCTGGCAGATTACAAC 7226565 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || ||| ||| | || || || | ||| || | || ||| Sbjct 7226566 ATCCAGAAGGAGAGCACCCTCCACTTGGTCCTCAGGCTGAGGGGTGGA 7226613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007466103144