Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq414 159 3e-34 >seq414 Length=5667865 Score = 159 bits (176), Expect = 3e-34 Identities = 593/918 (65%), Gaps = 25/918 (3%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 ||||||||||| |||||| | || |||||||| || || || | || || Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| ||||||| |||||| || |||||| || | | || | | || ||| Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAGTTGTACAACTTCTTATACCCCAAGGTGACCAGC 275181 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 ||| || || ||||| ||||| || |||||||| | || |||| ||||| | | Sbjct 275180 AATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAGC 275121 Query 4437 CTCACAGGTAGCGCGTATGTCAAA--AACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 || ||||| ||| || |||| |||||| ||| ||| | || || || | | | Sbjct 275120 CTGCAAGGTAACGC--ATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAA 275063 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAA-ACAATAAACACGCA 4553 | | | || |||| | |||| | | ||| | | | | | ||| || || Sbjct 275062 GCCCATGCACCTTTTCTTCACTAAGTTTCCCT-CGAAGCAGACTATAGATTAAGCAAGCG 275004 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 ||||||||||| | |||||| || | ||| ||||| || || || || || || ||| Sbjct 275003 AAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGGC 274944 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || || || || ||||| | ||| ||||||||| || || || || ||||||||| Sbjct 274943 ATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCCT 274884 Query 4674 TCTACGGCGGCAAACGCTACTAA----TCGGGACCCGAACGAGCTGGCTTTGTCTTTAAT 4729 || || ||||| || | || || ||| || || || | | | || Sbjct 274883 TCGACACAAGCAAAGGCGAGTAGCCTCTCTGGA----AAAGA-CT--CAGAACCCTCGAT 274831 Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 ||| | ||||| || || || || | || ||||||| || | || || || Sbjct 274830 CCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAA 274771 Query 4790 TAATTTACTTTT---TTCA-AATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 | || || || |||| ||| ||||| | || || || | ||||| ||||||| Sbjct 274770 GAGCTTGCTCTTCTCTTCAGAATC---CTTGA-TGTATGTTTCCAAAAGTAGACTATACA 274715 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 | || || || |||||||| || |||||||| || || ||||| || || || | | Sbjct 274714 TCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAA 274655 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 | || || || || ||||| | | | || ||| || || || || || | Sbjct 274654 CCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCG 274595 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025 | || || || | |||||| || || | || ||||||| |||| ||||||| Sbjct 274594 CGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGT 274535 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085 | | | ||||| | ||||||||||||||| | |||||||| || || || || || | Sbjct 274534 GACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCT 274475 Query 5086 TGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTCGTTAG 5145 ||||||| ||| || ||||| |||||||| || | ||| || | | ||| | Sbjct 274474 TGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGTTGG 274415 Query 5146 GTGTAAGAAGCGGTTCTT 5163 | | |||||||||||||| Sbjct 274414 GGGCAAGAAGCGGTTCTT 274397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046903982494