Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq414 280 2e-70 seq507 129 8e-25 >seq414 Length=5667865 Score = 280 bits (310), Expect = 2e-70 Identities = 591/872 (68%), Gaps = 12/872 (1%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| |||||||| || || |||| || ||||| || || || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAA-AT 47968 ||||| ||||||| |||||| || || || | || ||| | || || ||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAGTTGTACAACTTCTTATACCCCAAGG-TGACCAG 275182 Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028 || | |||| || || || ||||| ||| |||||| || | |||||||| | ||| Sbjct 275181 CAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAG 275122 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 | |||| || || || ||||||| ||| ||| | || |||||| | | | Sbjct 275121 CCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAAG 275062 Query 48089 CG-ATGTTACCGTTTCCTCACTTGGTGGATACAACAAAT--GTTTAAACATTAAACATGC 48145 | ||| ||| |||| ||||| || | | | || | || | ||||| || || Sbjct 275061 CCCATGC-ACCTTTTCTTCACTAAGTT--TCCCTCGAAGCAGACTATAGATTAAGCAAGC 275005 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||||||||||| ||||||||||| | ||| | ||| || || || || | ||| || Sbjct 275004 GAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAGG 274945 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| | || | |||||| | ||| ||||| || ||| ||| || || |||||||| Sbjct 274944 CATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGCC 274885 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--ATCCAC 48323 ||| || ||||| ||| || |||||| | || | || | | ||||| Sbjct 274884 TTCGACACAAGCAAAGGCGAGTAGCCTCTCT--GGAAAAGACTCAGAACCCTCGATCCAG 274827 Query 48324 CGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 || | ||||||| |||||||| | ||||| || | ||||| || ||| ||||| Sbjct 274826 CGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGAGC 274767 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | || || | ||| || | ||| || || | | ||||||||||| || ||| Sbjct 274766 TTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTCTGAG 274707 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 ||||||||||||||||| ||||| || || ||||| || || || | | ||| ||| Sbjct 274706 TGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGACC 274647 Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563 ||| | |||| |||||| |||||| || |||||||| || || || || Sbjct 274646 TCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGAAG 274587 Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATA 48623 |||| |||||||| || |||| || |||| || || || ||||||| | || | Sbjct 274586 GCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGAGA 274527 Query 48624 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATA 48683 |||| ||||| ||| |||||||| || |||||||| || |||||||| || || ||||| Sbjct 274526 TCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACATC 274467 Query 48684 TTCCATATATCACTGTATTGGATTGGGAAAAT 48715 | ||| || ||| ||| || |||||||| || Sbjct 274466 TCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 219 bits (242), Expect = 6e-52 Identities = 596/907 (66%), Gaps = 8/907 (1%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || ||||| || || ||||||| ||||| || || || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| | || || || || |||||| || | || || | || ||| | | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 | |||||| || ||||| ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 48030 TTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATC 48089 | || | || || || |||||| ||| ||| || |||||| | | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGC 3473539 Query 48090 GATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAA 48147 |||||||| ||||| | | | || | | || | | || || || | Sbjct 3473538 CCGTGCACCGTTTCTTCACTAAGCTTCACTTTAAGCA--GACTATAGAGCAAGCAAGCGA 3473481 Query 48148 AATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCA 48207 | |||||||| | ||| ||||| | ||| | || || || || || | ||||||| Sbjct 3473480 AGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCA 3473421 Query 48208 TTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTT 48267 | || || | ||||| | ||| |||||||| ||| ||| || || ||||| |||| Sbjct 3473420 TCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTT 3473361 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--ATCCACCG 48325 | ||| ||||| || || |||||| || ||| | || | | ||||| || Sbjct 3473360 CCACGCAGGCAAAAGCCAGTAGCCTCTCTGCG-AAC-GACTCAGAACCATCGATCCAACG 3473303 Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 | |||||| |||||||||| |||||||| | ||||| |||||| ||||| Sbjct 3473302 AAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGCCT 3473243 Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445 | | ||||| | ||| || | |||||| || | || |||||||||||| || ||||| Sbjct 3473242 GCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAGTG 3473183 Query 48446 AATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 || ||||||||||| ||||| || |||||||| | || || | | ||| ||||| Sbjct 3473182 GATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACCTC 3473123 Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565 | | || | |||| | ||| || || || || || || || ||||| || Sbjct 3473122 CTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAAGC 3473063 Query 48566 TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATC 48625 || | |||||| || |||| ||||||| || ||||| | ||||| | || ||| Sbjct 3473062 TAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGATC 3473003 Query 48626 TTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATT 48685 || || | ||| || || || || ||||| || || || |||||||| || ||||| | Sbjct 3473002 TTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCTC 3472943 Query 48686 CCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGAT 48745 ||| || | | ||| || |||||||| || || | || || ||| ||||||| Sbjct 3472942 CCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGGAG 3472883 Query 48746 AGGTTCC 48752 |||||| Sbjct 3472882 GGGTTCC 3472876 >seq507 Length=3453940 Score = 129 bits (142), Expect = 8e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 ||||| ||||| || | ||| ||||| ||||| |||||||||| | ||| | |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 78459 TATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||||| | || ||| ||||| || || | ||| || || || ||||| || | ||||| Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 |||||| |||||||||||||| || || || || | | ||| || ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||| || |||||||| |||| || ||| ||||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 129 bits (142), Expect = 8e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 ||||| ||||| || | ||| ||||| ||||| |||||||||| | ||| | |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 78459 TATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||||| | || ||| ||||| || || | ||| || || || ||||| || | ||||| Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 |||||| |||||||||||||| || || || || | | ||| || ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||| || |||||||| |||| || ||| ||||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664302019520