Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq414 248 1e-60 >seq414 Length=5667865 Score = 248 bits (274), Expect = 1e-60 Identities = 587/874 (67%), Gaps = 16/874 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||||||||| || || |||| || ||||| || || || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 46399 TCCATAAAATCAAACGGATTA-GTAACATTATAAAtttttttAAATCCTAATTCTGAA-A 46456 ||||| ||||||| |||||| || | || || | || ||| | || || ||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAG-TTGTACAACTTCTTATACCCCAAGG-TGACCA 275183 Query 46457 TCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGA 46516 || | |||| || || || ||||| || |||||| || | |||||||| | | Sbjct 275182 GCAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAA 275123 Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576 | || |||| || || || ||||||| ||||||| | || ||||||| | | Sbjct 275122 GCCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAA 275063 Query 46577 TCG-ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAAT--GTTTAAACATTAAACATG 46633 | ||| || |||| ||||| || | | || || | || | ||||| || | Sbjct 275062 GCCCATGCACCT-TTTCTTCACTAAGTT--TCCCTCGAAGCAGACTATAGATTAAGCAAG 275006 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 | ||||||||||| || |||||||| | ||| | ||| || || || || | |||| Sbjct 275005 CGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACCAG 274946 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| | || | ||||| | ||| |||||||| ||| ||| || || ||||||| Sbjct 274945 GCATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAGAAAAATATGC 274886 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA---TGAATCC 46810 |||| ||| || || |||| || |||||| | || | | ||| | | |||| Sbjct 274885 CTTCGACACAAGCAAAGGCGAGTAGCCTCTCT--GGAAAAGAC-TCAGAACCCTCGATCC 274829 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | | | ||||||| ||||| || | ||||| || | ||||| || ||| |||| Sbjct 274828 AGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAAGA 274769 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 | | | || || ||| ||| || | ||||| || | | ||||||||||| |||| Sbjct 274768 GCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTCTG 274709 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 | ||||| |||||||| || ||||| || || ||||| || || || | || ||| | Sbjct 274708 AGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTGGA 274649 Query 46991 CCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 |||| | |||| ||| || |||||| || |||||||| || || || | Sbjct 274648 CCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAAGA 274589 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | || | |||||||| || |||| || || || | || || ||||||| | || Sbjct 274588 AGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACGGA 274529 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 ||||| ||||| ||| |||||||| || ||||| || || |||||||| || || |||| Sbjct 274528 GATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTACA 274469 Query 47171 TATTCCATATATCACGATATTGGATCGGAAAAAT 47204 | | ||| || ||| | || || || || || || Sbjct 274468 TCTCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 188 bits (208), Expect = 1e-42 Identities = 567/874 (65%), Gaps = 16/874 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||||| || || ||||||| ||||| || || || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| | || || || || |||| || | || || | || ||| | | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 | |||||| || ||||| ||||| || ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 || ||| | || || || |||||| ||||||| || ||||||| | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGC 3473539 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGCATCAAAT------GTTTAAACATTAAACAT 46632 || ||||| ||||| | || ||| | | || | | || || Sbjct 3473538 CCGTGCACCGTTTCTTCACT------AAGCTTCACTTTAAGCAGACTATAGAGCAAGCAA 3473485 Query 46633 GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCA 46692 || || |||||||| | || ||||| | ||| | || || || || || | ||| Sbjct 3473484 GCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCG 3473425 Query 46693 GGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATG 46752 ||||| || || | |||||| | ||| ||||| || ||| ||| || || ||||| Sbjct 3473424 GGCATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATA 3473365 Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA--ACTGGCATCATTATGAATCC 46810 ||||| || || || || | || |||||| || | ||| || | || |||| Sbjct 3473364 CCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACT--CAGAACCATCGATCC 3473307 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | | | |||||| ||||| |||| |||||||| | ||||| |||||| |||| Sbjct 3473306 AACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGA 3473247 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 | | | ||||| ||| ||| || | || || || | || |||||||||||| || | Sbjct 3473246 GCCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAG 3473187 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 | || ||||||||||| || ||||| || |||||||| | || || | || ||| | Sbjct 3473186 AGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGA 3473127 Query 46991 CCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 |||| | || | ||| | ||| || ||| || || || || || |||| Sbjct 3473126 CCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAA 3473067 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | || | | |||||| || |||| ||||| || | ||||| | ||||| | || Sbjct 3473066 AAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGA 3473007 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 ||||| || | ||| || || || || |||||||| || || |||||||| || |||| Sbjct 3473006 GATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACA 3472947 Query 47171 TATTCCATATATCACGATATTGGATCGGAAAAAT 47204 | | ||| || | | | || || || || || || Sbjct 3472946 TCTCCCAGATTTGAGGGTACTGAATTGGGAACAT 3472913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929783749760