Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq197427 331 1e-85
seq155647 174 2e-38
seq194317 127 2e-24
seq116321 122 9e-23
seq160375 118 1e-21
seq176217 113 5e-20
seq156113 113 5e-20
seq194543 111 2e-19
seq181690 107 2e-18
seq188063 96.9 4e-15
seq93507 96.9 4e-15
seq190796 84.2 2e-11
seq183834 84.2 2e-11
>seq197427
Length=19924
Score = 331 bits (366), Expect = 1e-85
Identities = 526/748 (70%), Gaps = 20/748 (3%)
Strand=Plus/Minus
Query 116627 TACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAG 116686
||||| | || ||| |||||||| || || || || || |||||||| | || ||
Sbjct 14523 TACCCACAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCCTTCTGGACGGCTGAAGAA 14464
Query 116687 GTGGACCTGTCCAAGGACACGAGCGACTGGGAGCG---CTTGAACGACAACGAGCGCCAT 116743
|| || || ||| ||| || |||||||| | ||| |||| ||||||| ||
Sbjct 14463 GTCGATCTCTCCTCCGACCTCCGCCACTGGGAGGAAACCCTGACCGACGACGAGCGACAC 14404
Query 116744 TTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTG 116803
||||||| ||||| || ||||| ||||||||| ||||| |||||| ||||| |||
Sbjct 14403 TTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCTGACGGTATCGTCTTGGAGAACCTG 14344
Query 116804 GTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAG 116863
| || | ||| ||||||| ||||| || ||||| | ||| |||||||| ||
Sbjct 14343 GCCGGCAGGTTCATGAAGGAGGTCCAGGTAGCTGAGGCCAGAGCCTTTTACGGCTTCCAA 14284
Query 116864 ATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCAT---CGACACGTACGTG 116920
|||||||| |||||| | ||||| |||||||| | |||| | ||| ||||| |
Sbjct 14283 ATCGCCATCGAGAACATCCACTCCGAAATGTAC---AGCCTCTTGCTCGAGTCGTACATC 14227
Query 116921 CGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAA 116980
||| | |||||| ||| | || |||| ||||||||||| || ||||| ||
Sbjct 14226 AAGGATTCTAACGAGAAGGACCGGCTTTTCCACGCGATCGAGACGATCCCTTGCGTGGAA 14167
Query 116981 GAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGC 117040
|||||||| ||||||| || ||||||| ||| | ||| | |||| ||||||
Sbjct 14166 AAGAAGGCCAAGTGGGCCCTCAAGTGGATCGACGGTGGCGAG---TCTTTCGCCGAGCGA 14110
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
| || ||||| || |||||| || | ||||| || || || ||| ||| || ||
Sbjct 14109 ATCGTTGCCTTTGCTTGCGTCGAAGGGATTTTCTTCTCCGGGAGCTTCTGCGCGATCTTC 14050
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
|||||||| || ||||| | ||||| || |||| ||| ||||||| | ||||| ||
Sbjct 14049 TGGCTCAAAAAGCGCGGGTTGATGCCTGGGTTGACCTTCTCCAACGAGTTGATCTCAAGA 13990
Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTG---CAGCGA 117217
||||| || |||| ||||| |||||||| ||||||| | || ||| || |||
Sbjct 13989 GACGAAGGCTTGCACTGCGATTTTGCCTGCTTGCTGTACGAG---TTGCTGACTCAGAAG 13933
Query 117218 CCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTC 117277
| ||||| || ||| ||||||| || || |||| ||||| | |||||| | ||
Sbjct 13932 CTGAGCGAGGAGCGAGTCAGGGGAATTGTGGCCGATGCGGTGGAGATCGAGAGGGAGTTT 13873
Query 117278 CTCACCGAAGCGCTGCCG-GTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATA 117336
|| ||| ||||||||| |||| |||| |||| | ||| |||| |||| |||||
Sbjct 13872 GTCTGCGACGCGCTGCCGTGTGC-TCTGGTGGGCATGAATGGCGATTTGATGAGCCAATA 13814
Query 117337 CATCGAGTTCGTCGCCGACAGGCTGCTG 117364
|| || |||||||| || |||||| ||
Sbjct 13813 TATTGAATTCGTCGCTGATAGGCTGTTG 13786
>seq155647
Length=3035
Score = 174 bits (192), Expect = 2e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||||||||| || ||||| ||||| || ||||| || ||||| || |||| || ||| |
Sbjct 2006 AAAAATGCAGATCTTCGTCAAAACCCTAACGGGTAAGACCATAACTCTCGAGGTTGAATC 2065
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | |||| | | | | |||||| || || | ||||| || |||||||| ||||
Sbjct 2066 CTCGGACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGA 2125
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||||||| ||||||| ||| ||||||||||| || |||| || ||||| ||||||
Sbjct 2126 CCAGCAACGCCTCATCTTCGCTGGCAAACAGCTCGAGGACGGTCGGACCCTAGCCGACTA 2185
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||||||| | ||||| || || ||| ||||| | || || ||
Sbjct 2186 CAACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTGCGCCTCAGAGGTGG 2236
>seq194317
Length=10706
Score = 127 bits (140), Expect = 2e-24
Identities = 170/235 (72%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| | || || |||||||| ||| | || || ||| ||
Sbjct 1535 AAGATGCAGATCTTCGTCAAAACCTTAACCGGGAAAACCATAACCCTAGAGGTTGAATCC 1476
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | |||| | ||| || | |||||||| ||||| || | |||
Sbjct 1475 TCTGACACCATCGACAATGTCAAAGCAAAGATCCAGGACAAAGAAGGCATACCACCAGAC 1416
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || || |||| ||| ||||| |||||||| |||| | || || |||||||
Sbjct 1415 CAACAGCGCCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGAAGAACTCTAGCCGACTAC 1356
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCT 40921
|||||||||||||| ||||||| || || || | ||| | | ||||| ||||
Sbjct 1355 AACATCCAGAAGGAATCCACGCTCCACCTCGTCCTCCGCCTTCGCGGCGG-GGCT 1302
>seq116321
Length=1411
Score = 122 bits (134), Expect = 9e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| || || || || ||| | || ||||| |
Sbjct 636 ATGCAGATCTTTGTGAAAACCCTCACCGGAAAGACTATTACCTTGGAGGTCGAGAGTTCA 695
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || |||| ||||||||||| ||||| | |||||
Sbjct 696 GACACCATCGATAACG-TGAAGGCTAAGATTCAAGACAAAGAGGGGATCCCACCAGACCA 754
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || |||||||| || || | || |||||| |||||||||
Sbjct 755 GCAGAGGCTCATCTTCGCCGGAAAACAGCTCGAGGATGGCCGTACCCTCGCCGACTACAA 814
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| | || || ||| | |||
Sbjct 815 TATCCAGAAGGAGTCAACTCTCCATTTGGTG 845
Score = 113 bits (124), Expect = 5e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || ||||| ||| | || ||||| | ||
Sbjct 1092 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACCATTACCTTGGAGGTCGAGAGCTCC 1151
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| ||||| ||||| |||| ||
Sbjct 1152 GACACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGATCA 1210
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || || | || ||| | || |||||
Sbjct 1211 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACCTTGGCTGATTACAA 1270
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || || | ||| | || ||||||| |||
Sbjct 1271 CATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTCTGAGGGGTGGC 1319
>seq160375
Length=3367
Score = 118 bits (130), Expect = 1e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| ||||| ||||| ||||||||| | || || ||| | ||
Sbjct 1380 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAAAGCTCC 1321
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| ||||||| ||||| ||||| ||||| | |||||
Sbjct 1320 GACACCATTGATAACG-TGAAGGCTAAAATTCAAGACAAGGAGGGAATCCCACCAGACCA 1262
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || || | ||| || || || |||| |||| || ||| | || |||||
Sbjct 1261 GCAGAGGCTTATTTTCGCTGGAAAGCAATTGGAGGACGGCCGTACCTTGGCTGATTACAA 1202
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| || ||
Sbjct 1201 CATCCAGAAGGAGTCCACCCTTCA 1178
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| ||||| ||||||||||||||| | || || || | ||
Sbjct 240 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAAACCATCACCTTGGAGGTTGAGAGCTCC 181
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || |||| | |||| || || | || || ||||| ||||| |||| ||
Sbjct 180 GACACAATTGACAACG-TGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCGGATCA 122
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || || | || ||| | || |||||
Sbjct 121 GCAGAGGCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACCTTGGCTGATTACAA 62
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||| ||| |||| |||||||| ||
Sbjct 61 CATTCAGAAAGAGTCCACCCTGCATCTTGT 32
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||||||||||||| | || || || | ||
Sbjct 696 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAAACCATCACCTTGGAGGTTGAGAGCTCC 637
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| ||||| ||||| |||| ||
Sbjct 636 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGATCA 578
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || || | || ||| | || || ||
Sbjct 577 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACCTTGGCTGATTATAA 518
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| |||| || || | ||| | || ||||||| ||
Sbjct 517 CATCCAGAAGGAATCCACCCTACACTTGGTGCTCCGTCTGAGGGGTGG 470
Score = 105 bits (116), Expect = 7e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| ||||||||| | || || || | ||
Sbjct 1152 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 1093
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| ||||||| ||||| ||||| ||||| | |||||
Sbjct 1092 GACACTATTGATAACG-TGAAGGCGAAAATTCAAGACAAGGAGGGTATCCCACCAGACCA 1034
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || || | || ||| | ||||||||
Sbjct 1033 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACCTTGGCTGACTACAA 974
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
|||||||||||| |||| || || | ||| | |||
Sbjct 973 CATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGC 937
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| || ||||| | || || || | ||
Sbjct 924 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACAATCACTTTGGAGGTTGAGAGCTCC 865
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| ||||| ||||| |||||||
Sbjct 864 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGACCA 806
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || || || || || | || ||| | ||||||||
Sbjct 805 GCAGAGGCTCATCTTCGCCGGAAAGCAACTTGAGGATGGCCGTACCTTGGCTGACTACAA 746
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| |||||||| |||| || || | ||| | || ||||||| ||
Sbjct 745 CATTCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTCTGAGGGGTGG 698
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || || |||||| | || || || |
Sbjct 468 ATGCAGATTTTCGTGAAGACCTTGACTGGAAAGACAATCACCTTGGAGGTGGAGAGTTCT 409
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| | |||| || || | || || ||||| ||||| |||| ||
Sbjct 408 GACACCATTGACAACG-TGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCGGATCA 350
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | ||||||| ||| || || ||||| || || | || ||| | ||||||||
Sbjct 349 GCAGAGGCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCTTGGCTGACTACAA 290
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| |||| || || | ||| | || | ||||| |||
Sbjct 289 TATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTCTCAGGGGTGGC 241
>seq176217
Length=4970
Score = 113 bits (124), Expect = 5e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||||||||| ||||| ||||| || || |||||||| | || || ||| ||
Sbjct 2518 ATGCAAATATTCGTGAAAACTCTCACCGGGAAGACCATCACTTTGGAGGTGGAAAGTTCC 2459
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| | |||| ||| || | || || || || || ||| |||||||
Sbjct 2458 GATACAATTGATAACGTT-AAGGCAAAGATCCAAGATAAGGAAGGGATTCCCCCGGACCA 2400
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| || || ||||| ||||| || | | | ||||| || |||||
Sbjct 2399 GCAGAGGCTGATCTTTGCTGGGAAACAACTGGAGGATGGGAGGACCCTAGCGGATTACAA 2340
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||| |||||| | || ||||| | ||| | || ||||||| |||
Sbjct 2339 CATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGAGGGGAGGC 2291
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||||||||| || || || || || ||||||||||| | || |||||| | |
Sbjct 2746 ATGCAAATATTCGTGAAGACCCTGACAGGAAAAACCATCACTTTAGAGGTCGAAAGCTCT 2687
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| || |||| |||| | || || | ||||| || || || ||| | |||||
Sbjct 2686 GACACAATTGATAACG-TCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2628
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | || || | || ||||| || || || |||| || ||||| ||| |||||
Sbjct 2627 GCAAAGGCTTATTTTTGCCGGCAAGCAACTCGAGGACGGCCGTACCCTTGCCGATTACAA 2568
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||| ||||| |||| || ||| | ||| | || | || || |||
Sbjct 2567 TATCCAAAAGGAATCCACCCTCCATTTGGTGCTCCGTCTCAGAGGTGGC 2519
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || ||||||||||| | || |||||| | |
Sbjct 2974 ATGCAGATCTTCGTGAAAACCCTGACAGGAAAAACCATCACTTTGGAGGTCGAAAGCTCT 2915
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||| | || || | ||||| || || || ||| | |||||
Sbjct 2914 GACACTATTGATAACG-TCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2856
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | || |||| || ||||| || || || || | || ||||| ||| |||||
Sbjct 2855 GCAAAGGCTTATCTTTGCCGGCAAGCAACTCGAGGATGGCCGTACCCTTGCCGATTACAA 2796
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||| |||||| | || || ||
Sbjct 2795 CATCCAAAAGGAGTCAACCCTTCA 2772
>seq156113
Length=3066
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || |||||||| |||||| | || ||||| | ||
Sbjct 886 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACCTTGGAAGTCGAGAGCTCC 945
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| ||||| | ||||| || || || || |||| |||
Sbjct 946 GATACTATCGACAATGTAAAGGCCAAAATCCAAGACAAGGAAGGGATTCCTCCGGATCAG 1005
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | ||| || || || |||| || | ||| ||||| || || |||
Sbjct 1006 CAGCGGTTGATTTTCGCTGGTAAGCAATTGGAAGATGGGCGAACCCTAGCGGATTATAAC 1065
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | ||| ||||||| ||| || | |||||||| ||
Sbjct 1066 ATCCAGAAGGAGTCGACGTTGCATCTGGTGCTGAGGTTGAGGGGTGG 1112
>seq194543
Length=10949
Score = 111 bits (122), Expect = 2e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || ||||| || ||||| |||| |||||| | ||
Sbjct 3254 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAAAGCTCC 3313
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| ||||| | ||||| || || ||||| | || ||
Sbjct 3314 GACACTATCGACAACG-TCAAGGCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 3372
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | || |||| ||| || || || ||||| || | ||| || | ||| || ||
Sbjct 3373 GCAGAGGCTAATCTTCGCTGGAAAGCAACTGGAAGATGGGCGGACTTTAGCCGATTATAA 3432
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || || |||||
Sbjct 3433 CATCCAGAAGGAATCCACTCTTCACCTAGT 3462
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| || || |||||||| || ||| | || ||||| | |
Sbjct 3482 ATGCAAATCTTCGTCAAAACCCTTACTGGCAAAACAATTACCTTGGAAGTCGAGAGCTCT 3541
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||||| ||||| | || ||||| || || || | || |||
Sbjct 3542 GATACTATCGATAATGTCAAGGCCAAAATCCAAGATAAAGAAGGGATTCCTCCAGATCAG 3601
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | || || || ||| |||| || | ||| ||||| || || ||
Sbjct 3602 CAGCGTTTGATTTTTGCCGGTAAGCAGTTGGAAGATGGGCGGACCCTAGCAGATTATAAT 3661
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | ||| ||||||| ||| || | |||||||| ||
Sbjct 3662 ATCCAGAAGGAGTCGACGTTGCATCTGGTGCTGAGGTTGAGGGGTGG 3708
>seq181690
Length=5866
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || ||||| ||||| || || ||||| ||| | || || || |
Sbjct 3189 ATGCAAATATTTGTGAAAACCCTCACAGGGAAGACCATAACCCTTGAAGTGGAGAGTTCG 3130
Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | || |||| | |||| ||| |||| || || ||||| ||||| | |||||
Sbjct 3129 GATACCATTGACAACG-TTAAGGCAAAGATTCAAGATAAGGAGGGGATCCCACCAGACCA 3071
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | || |||| || || |||||||| || |||| |||||||| || |||||
Sbjct 3070 GCAAAGGCTTATCTTTGCTGGAAAACAGCTTGAAGACGGACGCACCCTTGCGGATTACAA 3011
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| || ||||| | || || || | || |||| || ||||||||
Sbjct 3010 TATTCAAAAGGAATCGACCCTTCACTTGGTTCTGCGTTTAAGGGGCGG 2963
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || ||||| ||||| || || ||||| ||| | || || || |
Sbjct 3417 ATGCAAATATTTGTGAAAACCCTCACAGGGAAGACCATAACCCTTGAGGTGGAGAGTTCG 3358
Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | || |||| | |||| ||| |||| || || ||||| |||||| | |||||
Sbjct 3357 GATACCATTGACAACG-TTAAGGCAAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCA 3299
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| | || |||| || || |||||| |||| || | | | ||||| || |||||
Sbjct 3298 GCAAAGGCTTATCTTTGCAGGGAAACAGTTGGAGGATGGGAGGACCCTAGCTGATTACAA 3239
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| |||||| | || || ||| | || | || | || |||||
Sbjct 3238 TATCCAAAAGGAGTCGACCCTTCATTTGGTTCTTCGTCTCAGAGGCGG 3191
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || || || |||||||| | || || || | |
Sbjct 2733 ATGCAGATTTTCGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTGGAGAACTCT 2674
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| ||| |||| ||||||||||| || || | || ||
Sbjct 2673 GACACTATTGATAACG-TGAAGTCAAAGATTCAAGACAAAGAGGGTATTCCGCCAGATCA 2615
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| || || || |||||||| |||| || |||||| ||||| ||
Sbjct 2614 GCAGAGATTGATCTTTGCAGGAAAGCAGCTGGAGGACGGCCGTACCCTCGCTGACTATAA 2555
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||| ||||| |||| || |||
Sbjct 2554 CATCCAAAAGGAATCCACCCTTCAT 2530
>seq188063
Length=7454
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || ||||| |||||||| | || | || | |
Sbjct 736 ATGCAGATTTTCGTGAAAACCCTAACCGGCAAGACCATCACGCTTGAGGAGAAAAGCTCT 677
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||| | || || | ||||| || || || || | |||||
Sbjct 676 GATACCATCGATAACG-TCAAAGCTAAGATCCAAGACAAGGAAGGGATTCCACCAGACCA 618
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| ||||||||| ||| || || || || || |||| || ||||| ||| |||||
Sbjct 617 GCAAAGACTCATCTTCGCCGGAAAGCAACTCGAGGACGGTCGTACCCTTGCCGATTACAA 558
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||| ||||| |||| || |||
Sbjct 557 CATCCAAAAGGAATCCACCCTCCAT 533
>seq93507
Length=917
Score = 96.9 bits (106), Expect = 4e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || ||||| |||||||| | || | || | ||
Sbjct 831 ATGCAGATTTTTGTGAAAACCCTAACCGGCAAGACCATCACGCTTGAGGAGAAAAGCTCC 772
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| |||| | || || | ||||| || || || || | |||||
Sbjct 771 GATACCATCGATAACG-TCAACGCTAAGATCCAAGACAAGGAAGGGATTCCACCAGACCA 713
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||| ||||||||| ||| || || || || || |||| || ||||| ||| |||||
Sbjct 712 GCAAAGACTCATCTTCGCCGGAAAGCAACTTGAGGACGGCCGTACCCTTGCCGATTACAA 653
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||| ||||| |||| || |||
Sbjct 652 CATCCAAAAGGAATCCACCCTCCAT 628
>seq190796
Length=8466
Score = 84.2 bits (92), Expect = 2e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151
|||||||||||||| || || | || || ||||| ||| |||| ||| || || ||
Sbjct 3181 GCCATATTTTGGCTTAAAAAGAGGGGACTGATGCCAGGCTTGACATTCTCAAATGAACTT 3122
Query 117152 ATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200
|| || || |||||||||||||| ||||||||||| || | |||| ||
Sbjct 3121 ATTTCTAGAGACGAGGGTCTGCACTGCGACTTTGCTTGCCTACTGTACA 3073
>seq183834
Length=6310
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/206 (69%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAG 40770
|| || ||||| || |||||| | || | |||| | |||| | | | ||| |||||
Sbjct 664 CTAACTGGCAAGACGATCACCCTTGAGGGGGAAGGCTCCGAAACCATCGGCACG-TCAAG 722
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
| ||| || | |||| || || || ||| | ||||||||| | || ||| ||| ||
Sbjct 723 GCAAAGATCCAAGACAGGGAAGGGATTCCCCCCGACCAGCAAAGGCTTGTCTTCGCCGGA 782
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| ||| |||| || ||||||||||||||||| | || ||
Sbjct 783 AAGCAGCTCGAGGACGGACGCCCCCTTGCGGATTACAACATCCAGAAGGAATCGACCCTT 842
Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916
|| | || |||| | ||||| ||
Sbjct 843 CACTTGGTTCTGCGTCTAAGGGGTGG 868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513929844631280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |