Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq187654 100 7e-16 >seq187654 Length=7318 Score = 100 bits (110), Expect = 7e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 111702 CAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATT 111761 ||||| ||||| | ||||| | | |||||||||||||||||||| |||||||| || Sbjct 4455 CAGTTCTATGTCGCCAACGGGGAGTTATCATGCCAAATGTATCAGCGCTCTGCTGACATG 4396 Query 111762 GGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 ||||||||||| || ||||| |||||| ||| || || | || ||| | || |||||| Sbjct 4395 GGTCTTGGTGTCCCATTTAACATTGCATCTTATGCCCTCTTGACATGCATGATTGCTCAT 4336 Query 111822 TTT 111824 || Sbjct 4335 GTT 4333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300010366458746