Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq156113 84.2 2e-11 >seq156113 Length=3066 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || |||||||| || || || ||||| || ||| | ||| ||| | | Sbjct 886 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACCTTGGAAGTCGAGAGCTCC 945 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | |||| ||||| ||||| || || ||||| | || ||||| Sbjct 946 GATACTATCG-ACAATGTAAAGGCCAAAATCCAAGACAAGGAAGGGATTCCTCCGGATCA 1004 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| || || || ||||| ||||||| |||| | || |||||||| Sbjct 1005 GCAGCGGTTGATTTTCGCTGGTAAGCAATTGGAAGATGGGCGAACCCTAGCGGATTATAA 1064 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || || ||||| || | ||| ||||| |||| ||| | || || Sbjct 1065 CATCCAGAAGGAGTCGACGTTGCATCTGGTGCTGAGGTTGAGGGGTGG 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424306171672360