Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq194543 167 5e-36
seq176217 138 3e-27
seq156113 114 3e-20
seq116321 114 3e-20
seq160375 102 2e-16
seq195141 100 7e-16
seq181690 100 7e-16
seq182420 91.5 3e-13
seq162333 89.7 1e-12
seq196719 86.0 1e-11
seq178300 84.2 5e-11
>seq194543
Length=10949
Score = 167 bits (184), Expect = 5e-36
Identities = 177/232 (76%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || ||||| || | || ||||| |||| |||| ||||| || || || || |
Sbjct 3256 CATG-CCGCCGCGTAGACGGAGGACGAGGTGAAGCGTGGACTCTTTCTGTATGTTGTAAT 3198
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||||||||| || ||||| || | |||||||| || ||||| |||||||| |||
Sbjct 3197 CGGCGAGCGTACGGCCGTCCTCGAGCTGTTTTCCAGCAAAGATTAGACGCTGCTGATCCG 3138
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||||||||| ||||||||||| || ||||||||||| || |||| |||| ||
Sbjct 3137 GAGGGATTCCTTCCTTATCCTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGAGCTTT 3078
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || ||||| ||||| ||||| || || || || || ||||| ||||||||
Sbjct 3077 CGACCTCGAGGGTGATTGTCTTACCAGTTAGGGTTTTCACGAAGATCTGCAT 3026
Score = 154 bits (170), Expect = 3e-32
Identities = 173/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || || || |||| ||| ||| || ||||| ||||| |||||
Sbjct 3480 CCGCCACGGAGACGGAGGACTAGGTGAAGAGTGGATTCCTTCTGGATGTTATAATCGGCT 3421
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
| || || || ||||| | ||| ||||| |||||||| || | ||| ||| |||||
Sbjct 3420 AAAGTCCGCCCATCTTCCAGTTGCTTTCCAGCGAAGATTAGCCTCTGCTGA---TCTGGA 3364
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||| || |||||||||||||| || ||||| || |||| ||| |||
Sbjct 3363 GGGATACCTTCCTTGTCCTGGATTTTCGCCTTGACGTTGTCGATAGTGTCGGAGCTTTCG 3304
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| || ||||| || |||||||| ||||||||
Sbjct 3303 ACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3254
Score = 107 bits (118), Expect = 5e-18
Identities = 158/221 (71%), Gaps = 12/221 (5%)
Strand=Plus/Minus
Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318
|| || || ||||| | ||| || || ||||||||||| || || || || || ||
Sbjct 3696 CTCAGCACCAGATGCAACGTCGACTCCTTCTGGATATTATAATCTGCTAGGGTCCGCCCA 3637
Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375
||||| || || || || || || |||| |||||| ||| ||||| || ||||||
Sbjct 3636 TCTTCCAACTGCTTACCGGCAAAAATCAAACGCTGCTGA---TCTGGAGGAATCCCTTCT 3580
Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432
||||| |||||||| || || || || || |||| ||| |||| || ||||| |
Sbjct 3579 TTATCTTGGATTTTGGCCTTGACATTATCGATAGTATCAGAGCTC---TCGACTTCCAAG 3523
Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || || || |||||||| || |||||
Sbjct 3522 GTAATTGTTTTGCCAGTAAGGGTTTTGACGAAGATTTGCAT 3482
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||||||||| || || || || || || ||||| || || || || || ||
Sbjct 3900 TCCTTCTGGATATTATAATCAGCTAGAGTCCGCCCATCTTCCAACTGCTTCCCAGCAAAA 3841
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||||||| | || || || || |||||||| || || || ||||| ||
Sbjct 3840 ATCAATCTCTGTTGATCAGGCGGAATCCCCTCCTTATCCTGTATCTTAGCCTTCACATTG 3781
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | ||| ||| || || || || || || |||||||| |||| |||||||
Sbjct 3780 TCAATTGTATCAGAACTC---TCCACCTCCAGAGTAATTGTCTTCCCAGTCAAAGTCTTG 3724
Query 288460 ACGAATATCTGCAT 288473
|| |||||||||||
Sbjct 3723 ACAAATATCTGCAT 3710
>seq176217
Length=4970
Score = 138 bits (152), Expect = 3e-27
Identities = 170/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | ||||| ||| ||| |||||||| |||||||||||
Sbjct 1836 CCACCTCGGAGGCGAAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTATAGTCGGCA 1895
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || ||||||||||||| | ||| ||| |||
Sbjct 1896 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGATCCGGTGGA 1955
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423
|| || || ||||| ||||| ||||| || || || || || | |||| ||| ||
Sbjct 1956 ATCCCCTCCTTATCTTGGATCTTCGCCTTGACATTATCAATTGTATCGGAACTC---TCA 2012
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || | || || ||||||||||||| ||||| || || |||||||||
Sbjct 2013 ACCTCCAAGGTTATAGTCTTCCCGGTCAATGTCTTCACAAAAATCTGCATT 2063
Score = 107 bits (118), Expect = 5e-18
Identities = 169/238 (71%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | ||| | || || | ||| | ||| ||| ||||||||||| || |
Sbjct 2516 CATG-CCACCTCTGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATATTGTAAT 2574
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|||| || || || ||||| || | ||| || || || || || || | || || |
Sbjct 2575 CGGCAAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGCCTTTGCTG---GT 2631
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
||||| |||||||| || |||||||| || ||||| ||||| || || | || ||
Sbjct 2632 CTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATTGTGTCAGAGC 2691
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||| || || | ||||| || || || ||||| ||||| |||||||| |||||
Sbjct 2692 T---TTCGACCTCTAAAGTGATGGTTTTTCCTGTCAGGGTCTTCACGAATATTTGCAT 2746
Score = 104 bits (114), Expect = 5e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || || || || || | || || || | |||||| || || |||
Sbjct 2328 TCCTTTTGGATGTTGTAATCCGCTAGGGTCCTCCCATCCTCCAGTTGTTTCCCAGCAAAG 2387
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||| || || ||| || ||||| ||||| ||||| || || || |||
Sbjct 2388 ATCAGCCTCTGCTGG---TCCGGGGGAATCCCTTCCTTATCTTGGATCTTTGCCTTAACG 2444
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| ||| || || | ||||| ||||||||||| ||||| ||
Sbjct 2445 TTATCAATTGTATCGGAACTTTCCACCTCCAAAGTGATGGTCTTCCCGGTGAGAGTTTTC 2504
Query 288460 ACGAATATCTGCAT 288473
|||||||| |||||
Sbjct 2505 ACGAATATTTGCAT 2518
Score = 86.0 bits (94), Expect = 1e-11
Identities = 161/234 (69%), Gaps = 12/234 (5%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||||||| || | || || | |||| || ||| || || || || ||||||||
Sbjct 2063 TCCACCGCGTAGACGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGC 2122
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || | || || || |||||||| ||||| ||||||| | ||| || |||||
Sbjct 2123 TAAAGTCCTCCCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGG---TCTGG 2179
Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGA 288419
||| || || || || ||||| ||||| ||||| || || || | || |||
Sbjct 2180 CGGGATCCCCTCCTTGTCTTGGATCTTCGCCTTCACATTATCGATGGTGTCCGAACTC-- 2237
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || | || || ||||| || |||| ||||||||||| || |||||
Sbjct 2238 -TCAACCTCCAAGGTTATAGTCTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 2290
>seq156113
Length=3066
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || || || | || || || ||||| ||||| || ||
Sbjct 1340 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCC 1281
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| ||||| || || ||||| |||| | ||| ||| | ||
Sbjct 1280 AGAGTCCGCCCATCTTCCAATTGCTTCCCAGCGAAAATCAACCTCTGCTGATCAGGCGGA 1221
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || |||||||| || || || || || || || || | ||| |||| ||
Sbjct 1220 ATCCCCTCCTTATCCTGTATCTTAGCCTTTACATTGTCAATCGTATCAGAGCTC---TCC 1164
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || |||||||| |||| ||||||||| |||||||||||
Sbjct 1163 ACCTCCAGAGTAATTGTCTTCCCAGTCAAAGTCTTGACAAATATCTGCAT 1114
>seq116321
Length=1411
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | || || | ||||| || || || || ||||| || |||||
Sbjct 1090 CCACCCCTGAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCC 1031
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || ||||| || | ||||||||| |||||||| || | ||| || ||||
Sbjct 1030 AAGGTCCGACCGTCCTCGAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGG 971
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || || |||||||| || || || ||||| || || | ||| |||| ||
Sbjct 970 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCTGAGCTC---TCC 914
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| ||||| ||||||| ||||||||||| ||||||||
Sbjct 913 ACCTCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 864
Score = 102 bits (112), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | ||| | || || || |||||||| |||||||||
Sbjct 862 CCACCACGGAGACGAAGCACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCG 803
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | |||||||| |||||||| || | ||| || ||||
Sbjct 802 AGGGTACGGCCATCCTCGAGCTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGG 743
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424
|| || ||||| || || || || || |||||||| || || | | || | ||| |
Sbjct 742 ATCCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTATCGATGG--TGTCTGAACTCTCGA 685
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || | || || ||||| ||||| || || || || || ||||||||
Sbjct 684 CCTCCAAGGTAATAGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 636
Score = 100 bits (110), Expect = 7e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| || ||||| || || || || | || || || ||||| | || ||||| |||||
Sbjct 1283 TTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCTTCAAGCTGCTTTCCGGCGAA 1224
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | ||| ||| |||||| || || || |||||||| || || || |||||
Sbjct 1223 GATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1164
Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || | ||| ||| || || || | || || ||||| |||||||| |||||
Sbjct 1163 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAGGTAATGGTCTTTCCGGTCAGGGTCTT 1107
Query 288459 GACGAATATCTGCAT 288473
|||||| ||||||||
Sbjct 1106 GACGAAGATCTGCAT 1092
>seq160375
Length=3367
Score = 102 bits (112), Expect = 2e-16
Identities = 165/235 (70%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | ||| | || || | || | ||| ||| || |||||||| ||||
Sbjct 238 CATG-CCACCCCTGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGT 296
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| || | || || || || || | || ||||| |||||||| || | ||| |||
Sbjct 297 CAGCCAAGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCG 356
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418
|||||| || || ||||||||||| || || |||||||| || || | || |||
Sbjct 357 GTGGGATCCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTC- 415
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || | ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 416 --TCCACCTCCAAGGTGATTGTCTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 468
Score = 96.9 bits (106), Expect = 8e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | ||| ||||| || || || || || ||
Sbjct 14 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTGTAATCAGCC 73
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | || || || |||||||| || | ||| ||| ||||
Sbjct 74 AAGGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGTGGG 133
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| || || ||||||||||| || || |||||||| || || | || |||| ||
Sbjct 134 ATCCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATTGTGTCGGAGCTC---TCA 190
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| || || ||||| || || || ||||| ||||||||
Sbjct 191 ACCTCCAAGGTGATGGTTTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 240
>seq195141
Length=11583
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||| || || ||||| || || || || || || | ||| |||||||| || |||
Sbjct 10166 CCTTCTTTGTCTTGAATTTTAGCCTTGACATTGTCAATTGTATCACTCGATTCCACCTCG 10225
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| |||||||||||||| ||||| || || ||||| |||||||||
Sbjct 10226 AGGGTGATCGTCTTCCCAGTCAGGGTTTTCACGAAGATCTGCATT 10270
>seq181690
Length=5866
Score = 100 bits (110), Expect = 7e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| || || || || |||||||||||||| | |||||||| || ||
Sbjct 2998 TTCCTTTTGAATATTGTAATCCGCAAGGGTGCGTCCGTCTTCAAGCTGTTTTCCAGCAAA 3057
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || || |||||| || || ||||| || || || || || |||||
Sbjct 3058 GATAAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTATCTTGAATCTTTGCCTTAACGTT 3117
Query 288402 TTCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|| || | ||| ||| || ||||| || || || |||||||| || || || ||
Sbjct 3118 GTCAATGGTATC---CGAACTCTCCACTTCAAGGGTTATGGTCTTCCCTGTGAGGGTTTT 3174
Query 288459 GACGAATATCTGCAT 288473
|| ||||| |||||
Sbjct 3175 CACAAATATTTGCAT 3189
Score = 91.5 bits (100), Expect = 3e-13
Identities = 140/197 (71%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||||||||| || || || || || | || || || || ||||| ||||| |||
Sbjct 3455 TCCTTTTGGATATTGTAATCAGCTAGGGTCCTCCCATCCTCCAACTGTTTCCCTGCAAAG 3514
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | || || |||||| || ||||| ||||| ||||| || || || ||
Sbjct 3515 ATAAGCCTTTGCTG---GTCTGGGGGAATCCCTTCCTTATCTTGGATCTTTGCCTTGACA 3571
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | ||| ||| ||| || || || ||||| ||||| ||||| || ||
Sbjct 3572 TTATCAATTGTATCAGAGCT---TTCCACCTCAAGGGTGATGGTCTTACCGGTGAGGGTT 3628
Query 288457 TTGACGAATATCTGCAT 288473
|| || || ||||||||
Sbjct 3629 TTCACAAAGATCTGCAT 3645
>seq182420
Length=6015
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| || ||||| || || ||||| || || || |||| || || || || || |||
Sbjct 2714 CCTTCCTTGTCCTGAATCTTAGCTTTGACATTGTCGATAGTGTCACTTGACTCGACCTCG 2773
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| |||||||||||||| || ||||| || ||||| |||||||||
Sbjct 2774 AGTGTGATCGTCTTCCCAGTTAGAGTTTTCACGAAAATCTGCATT 2818
>seq162333
Length=3517
Score = 89.7 bits (98), Expect = 1e-12
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | ||| || | || | ||||| ||| || |||||||| || ||||| ||
Sbjct 3156 TCCACCCCTGAGCCTCAAAACTAAATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 3097
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || || |||||||||||||| || ||||| |||| | ||||||| | |||
Sbjct 3096 AAGAGTCCGACCATCTTCTAATTGTTTGCCAGCGAAAATCAATCTCTGTTGATCAGGTGG 3037
Query 288366 GATTCCTTCTTTATCCTGG 288384
|| ||||| || ||||||
Sbjct 3036 AATGCCTTCCTTGTCCTGG 3018
>seq196719
Length=14904
Score = 86.0 bits (94), Expect = 1e-11
Identities = 183/264 (69%), Gaps = 12/264 (5%)
Strand=Plus/Plus
Query 325393 GTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGA 325452
||| ||||| || || || |||||||||||||| | || || || | | ||| |||
Sbjct 10557 GTTTATGTTGTTACTCCCCACATAATCCTGTGCCATACCAACAATTGTAC-TAGCA-AGA 10614
Query 325453 TGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACC 325510
|| |||||||| || || || |||||| | || ||||| |||||| |||||
Sbjct 10615 CTCTGCTCGCCATGATGGTAAGCCGAATGCTCAGATACATAACCAGAGAACTGAGCAACT 10674
Query 325511 TTCACGTCGGTCGTCAAA-TTGCGCTTGAAAG--CTGAATAT-ATCACTTTCCGTTGAGA 325566
|| | || | | |||| ||||||||||||| | ||| | ||| |||| ||
Sbjct 10675 TTTGCTTCCTT-GACAAAGTTGCGCTTGAAAGAACAGAACAGGATC---TTCCTCTGTCC 10730
Query 325567 AGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAA 325626
||||| ||||||||||| | ||| ||||| ||| | ||||| | ||| ||||
Sbjct 10731 TGGTTTCAAACCATCAACCATCGAAGGAATTGATCGCTGAAGATCTGCCATCGAAAACAG 10790
Query 325627 AATAAGTTCCTTGTCGATGAAGTC 325650
||||| ||||||| || |||||
Sbjct 10791 TATAAGCTCCTTGTTGACAAAGTC 10814
>seq178300
Length=5281
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|||||||| || || || || || || || || || || | ||||| ||||| |||
Sbjct 3623 CCTTCTTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCGCTACTCTCTACCTCG 3682
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||||||||| ||||| || || ||||||||||||||
Sbjct 3683 AGAGTGATCGTCTTCCCCGTCAGGGTTTTCACGAATATCTGCAT 3726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176628467392634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |