Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq194543 167 5e-36 seq176217 138 3e-27 seq156113 114 3e-20 seq116321 114 3e-20 seq160375 102 2e-16 seq195141 100 7e-16 seq181690 100 7e-16 seq182420 91.5 3e-13 seq162333 89.7 1e-12 seq196719 86.0 1e-11 seq178300 84.2 5e-11 >seq194543 Length=10949 Score = 167 bits (184), Expect = 5e-36 Identities = 177/232 (76%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || ||||| |||| |||| ||||| || || || || | Sbjct 3256 CATG-CCGCCGCGTAGACGGAGGACGAGGTGAAGCGTGGACTCTTTCTGTATGTTGTAAT 3198 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||||||||| || ||||| || | |||||||| || ||||| |||||||| ||| Sbjct 3197 CGGCGAGCGTACGGCCGTCCTCGAGCTGTTTTCCAGCAAAGATTAGACGCTGCTGATCCG 3138 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||||||||| ||||||||||| || ||||||||||| || |||| |||| || Sbjct 3137 GAGGGATTCCTTCCTTATCCTGGATCTTTGCTTTCACGTTGTCGATAGTATCGGAGCTTT 3078 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| || || || || || ||||| |||||||| Sbjct 3077 CGACCTCGAGGGTGATTGTCTTACCAGTTAGGGTTTTCACGAAGATCTGCAT 3026 Score = 154 bits (170), Expect = 3e-32 Identities = 173/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || || |||| ||| ||| || ||||| ||||| ||||| Sbjct 3480 CCGCCACGGAGACGGAGGACTAGGTGAAGAGTGGATTCCTTCTGGATGTTATAATCGGCT 3421 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 | || || || ||||| | ||| ||||| |||||||| || | ||| ||| ||||| Sbjct 3420 AAAGTCCGCCCATCTTCCAGTTGCTTTCCAGCGAAGATTAGCCTCTGCTGA---TCTGGA 3364 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| ||||| || |||||||||||||| || ||||| || |||| ||| ||| Sbjct 3363 GGGATACCTTCCTTGTCCTGGATTTTCGCCTTGACGTTGTCGATAGTGTCGGAGCTTTCG 3304 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| || ||||| || |||||||| |||||||| Sbjct 3303 ACCTCGAGCGTGATCGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3254 Score = 107 bits (118), Expect = 5e-18 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | ||| || || ||||||||||| || || || || || || Sbjct 3696 CTCAGCACCAGATGCAACGTCGACTCCTTCTGGATATTATAATCTGCTAGGGTCCGCCCA 3637 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 ||||| || || || || || || |||| |||||| ||| ||||| || |||||| Sbjct 3636 TCTTCCAACTGCTTACCGGCAAAAATCAAACGCTGCTGA---TCTGGAGGAATCCCTTCT 3580 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 ||||| |||||||| || || || || || |||| ||| |||| || ||||| | Sbjct 3579 TTATCTTGGATTTTGGCCTTGACATTATCGATAGTATCAGAGCTC---TCGACTTCCAAG 3523 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || |||||||| || ||||| Sbjct 3522 GTAATTGTTTTGCCAGTAAGGGTTTTGACGAAGATTTGCAT 3482 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||||||||| || || || || || || ||||| || || || || || || Sbjct 3900 TCCTTCTGGATATTATAATCAGCTAGAGTCCGCCCATCTTCCAACTGCTTCCCAGCAAAA 3841 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||||| | || || || || |||||||| || || || ||||| || Sbjct 3840 ATCAATCTCTGTTGATCAGGCGGAATCCCCTCCTTATCCTGTATCTTAGCCTTCACATTG 3781 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || || || || |||||||| |||| ||||||| Sbjct 3780 TCAATTGTATCAGAACTC---TCCACCTCCAGAGTAATTGTCTTCCCAGTCAAAGTCTTG 3724 Query 288460 ACGAATATCTGCAT 288473 || ||||||||||| Sbjct 3723 ACAAATATCTGCAT 3710 >seq176217 Length=4970 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||||| ||| ||| |||||||| ||||||||||| Sbjct 1836 CCACCTCGGAGGCGAAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTATAGTCGGCA 1895 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || ||||||||||||| | ||| ||| ||| Sbjct 1896 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGATCCGGTGGA 1955 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || ||||| ||||| ||||| || || || || || | |||| ||| || Sbjct 1956 ATCCCCTCCTTATCTTGGATCTTCGCCTTGACATTATCAATTGTATCGGAACTC---TCA 2012 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | || || ||||||||||||| ||||| || || ||||||||| Sbjct 2013 ACCTCCAAGGTTATAGTCTTCCCGGTCAATGTCTTCACAAAAATCTGCATT 2063 Score = 107 bits (118), Expect = 5e-18 Identities = 169/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || | ||| | ||| ||| ||||||||||| || | Sbjct 2516 CATG-CCACCTCTGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATATTGTAAT 2574 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || || ||||| || | ||| || || || || || || | || || | Sbjct 2575 CGGCAAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGCCTTTGCTG---GT 2631 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| |||||||| || |||||||| || ||||| ||||| || || | || || Sbjct 2632 CTGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATTGTGTCAGAGC 2691 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||| || || | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct 2692 T---TTCGACCTCTAAAGTGATGGTTTTTCCTGTCAGGGTCTTCACGAATATTTGCAT 2746 Score = 104 bits (114), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || || || || || | || || || | |||||| || || ||| Sbjct 2328 TCCTTTTGGATGTTGTAATCCGCTAGGGTCCTCCCATCCTCCAGTTGTTTCCCAGCAAAG 2387 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || || ||| || ||||| ||||| ||||| || || || ||| Sbjct 2388 ATCAGCCTCTGCTGG---TCCGGGGGAATCCCTTCCTTATCTTGGATCTTTGCCTTAACG 2444 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| ||| || || | ||||| ||||||||||| ||||| || Sbjct 2445 TTATCAATTGTATCGGAACTTTCCACCTCCAAAGTGATGGTCTTCCCGGTGAGAGTTTTC 2504 Query 288460 ACGAATATCTGCAT 288473 |||||||| ||||| Sbjct 2505 ACGAATATTTGCAT 2518 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| || | || || | |||| || ||| || || || || |||||||| Sbjct 2063 TCCACCGCGTAGACGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGC 2122 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || | || || || |||||||| ||||| ||||||| | ||| || ||||| Sbjct 2123 TAAAGTCCTCCCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGG---TCTGG 2179 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGA 288419 ||| || || || || ||||| ||||| ||||| || || || | || ||| Sbjct 2180 CGGGATCCCCTCCTTGTCTTGGATCTTCGCCTTCACATTATCGATGGTGTCCGAACTC-- 2237 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || ||||| || |||| ||||||||||| || ||||| Sbjct 2238 -TCAACCTCCAAGGTTATAGTCTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 2290 >seq156113 Length=3066 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | || || || ||||| ||||| || || Sbjct 1340 CCACCGCGGAGACGGAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCC 1281 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| ||||| || || ||||| |||| | ||| ||| | || Sbjct 1280 AGAGTCCGCCCATCTTCCAATTGCTTCCCAGCGAAAATCAACCTCTGCTGATCAGGCGGA 1221 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || |||||||| || || || || || || || || | ||| |||| || Sbjct 1220 ATCCCCTCCTTATCCTGTATCTTAGCCTTTACATTGTCAATCGTATCAGAGCTC---TCC 1164 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||| |||| ||||||||| ||||||||||| Sbjct 1163 ACCTCCAGAGTAATTGTCTTCCCAGTCAAAGTCTTGACAAATATCTGCAT 1114 >seq116321 Length=1411 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || | ||||| || || || || ||||| || ||||| Sbjct 1090 CCACCCCTGAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCC 1031 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| || | ||||||||| |||||||| || | ||| || |||| Sbjct 1030 AAGGTCCGACCGTCCTCGAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGG 971 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || || || ||||| || || | ||| |||| || Sbjct 970 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCTGAGCTC---TCC 914 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 913 ACCTCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 864 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | || || || |||||||| ||||||||| Sbjct 862 CCACCACGGAGACGAAGCACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCG 803 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | |||||||| |||||||| || | ||| || |||| Sbjct 802 AGGGTACGGCCATCCTCGAGCTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGG 743 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 || || ||||| || || || || || |||||||| || || | | || | ||| | Sbjct 742 ATCCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTATCGATGG--TGTCTGAACTCTCGA 685 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || | || || ||||| ||||| || || || || || |||||||| Sbjct 684 CCTCCAAGGTAATAGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 636 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || || || || | || || || ||||| | || ||||| ||||| Sbjct 1283 TTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCTTCAAGCTGCTTTCCGGCGAA 1224 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| ||| |||||| || || || |||||||| || || || ||||| Sbjct 1223 GATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 1164 Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | ||| ||| || || || | || || ||||| |||||||| ||||| Sbjct 1163 GTCAATGGTGTCGGAGCTC---TCGACCTCCAAGGTAATGGTCTTTCCGGTCAGGGTCTT 1107 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 1106 GACGAAGATCTGCAT 1092 >seq160375 Length=3367 Score = 102 bits (112), Expect = 2e-16 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | || || | || | ||| ||| || |||||||| |||| Sbjct 238 CATG-CCACCCCTGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGT 296 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | || || || || || | || ||||| |||||||| || | ||| ||| Sbjct 297 CAGCCAAGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCG 356 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || || ||||||||||| || || |||||||| || || | || ||| Sbjct 357 GTGGGATCCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTC- 415 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 416 --TCCACCTCCAAGGTGATTGTCTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 468 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | ||| ||||| || || || || || || Sbjct 14 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTGTAATCAGCC 73 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | || || || |||||||| || | ||| ||| |||| Sbjct 74 AAGGTACGGCCATCCTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGTGGG 133 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||||||||| || || |||||||| || || | || |||| || Sbjct 134 ATCCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATTGTGTCGGAGCTC---TCA 190 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| || || ||||| || || || ||||| |||||||| Sbjct 191 ACCTCCAAGGTGATGGTTTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 240 >seq195141 Length=11583 Score = 100 bits (110), Expect = 7e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || ||||| || || || || || || | ||| |||||||| || ||| Sbjct 10166 CCTTCTTTGTCTTGAATTTTAGCCTTGACATTGTCAATTGTATCACTCGATTCCACCTCG 10225 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||||||||| ||||| || || ||||| ||||||||| Sbjct 10226 AGGGTGATCGTCTTCCCAGTCAGGGTTTTCACGAAGATCTGCATT 10270 >seq181690 Length=5866 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| || || || || |||||||||||||| | |||||||| || || Sbjct 2998 TTCCTTTTGAATATTGTAATCCGCAAGGGTGCGTCCGTCTTCAAGCTGTTTTCCAGCAAA 3057 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || || |||||| || || ||||| || || || || || ||||| Sbjct 3058 GATAAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTATCTTGAATCTTTGCCTTAACGTT 3117 Query 288402 TTCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | ||| ||| || ||||| || || || |||||||| || || || || Sbjct 3118 GTCAATGGTATC---CGAACTCTCCACTTCAAGGGTTATGGTCTTCCCTGTGAGGGTTTT 3174 Query 288459 GACGAATATCTGCAT 288473 || ||||| ||||| Sbjct 3175 CACAAATATTTGCAT 3189 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| || || || || || | || || || || ||||| ||||| ||| Sbjct 3455 TCCTTTTGGATATTGTAATCAGCTAGGGTCCTCCCATCCTCCAACTGTTTCCCTGCAAAG 3514 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || || |||||| || ||||| ||||| ||||| || || || || Sbjct 3515 ATAAGCCTTTGCTG---GTCTGGGGGAATCCCTTCCTTATCTTGGATCTTTGCCTTGACA 3571 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| ||| || || || ||||| ||||| ||||| || || Sbjct 3572 TTATCAATTGTATCAGAGCT---TTCCACCTCAAGGGTGATGGTCTTACCGGTGAGGGTT 3628 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 3629 TTCACAAAGATCTGCAT 3645 >seq182420 Length=6015 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || ||||| || || ||||| || || || |||| || || || || || ||| Sbjct 2714 CCTTCCTTGTCCTGAATCTTAGCTTTGACATTGTCGATAGTGTCACTTGACTCGACCTCG 2773 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||||||||| || ||||| || ||||| ||||||||| Sbjct 2774 AGTGTGATCGTCTTCCCAGTTAGAGTTTTCACGAAAATCTGCATT 2818 >seq162333 Length=3517 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| || | || | ||||| ||| || |||||||| || ||||| || Sbjct 3156 TCCACCCCTGAGCCTCAAAACTAAATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 3097 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || |||||||||||||| || ||||| |||| | ||||||| | ||| Sbjct 3096 AAGAGTCCGACCATCTTCTAATTGTTTGCCAGCGAAAATCAATCTCTGTTGATCAGGTGG 3037 Query 288366 GATTCCTTCTTTATCCTGG 288384 || ||||| || |||||| Sbjct 3036 AATGCCTTCCTTGTCCTGG 3018 >seq196719 Length=14904 Score = 86.0 bits (94), Expect = 1e-11 Identities = 183/264 (69%), Gaps = 12/264 (5%) Strand=Plus/Plus Query 325393 GTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGA 325452 ||| ||||| || || || |||||||||||||| | || || || | | ||| ||| Sbjct 10557 GTTTATGTTGTTACTCCCCACATAATCCTGTGCCATACCAACAATTGTAC-TAGCA-AGA 10614 Query 325453 TGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACC 325510 || |||||||| || || || |||||| | || ||||| |||||| ||||| Sbjct 10615 CTCTGCTCGCCATGATGGTAAGCCGAATGCTCAGATACATAACCAGAGAACTGAGCAACT 10674 Query 325511 TTCACGTCGGTCGTCAAA-TTGCGCTTGAAAG--CTGAATAT-ATCACTTTCCGTTGAGA 325566 || | || | | |||| ||||||||||||| | ||| | ||| |||| || Sbjct 10675 TTTGCTTCCTT-GACAAAGTTGCGCTTGAAAGAACAGAACAGGATC---TTCCTCTGTCC 10730 Query 325567 AGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAA 325626 ||||| ||||||||||| | ||| ||||| ||| | ||||| | ||| |||| Sbjct 10731 TGGTTTCAAACCATCAACCATCGAAGGAATTGATCGCTGAAGATCTGCCATCGAAAACAG 10790 Query 325627 AATAAGTTCCTTGTCGATGAAGTC 325650 ||||| ||||||| || ||||| Sbjct 10791 TATAAGCTCCTTGTTGACAAAGTC 10814 >seq178300 Length=5281 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || || || || || || || || || || | ||||| ||||| ||| Sbjct 3623 CCTTCTTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTGTCGCTACTCTCTACCTCG 3682 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| ||||| || || |||||||||||||| Sbjct 3683 AGAGTGATCGTCTTCCCCGTCAGGGTTTTCACGAATATCTGCAT 3726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176628467392634