Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq116321 145 2e-29
seq176217 138 3e-27
seq194543 134 3e-26
seq160375 134 3e-26
seq155647 129 1e-24
seq194317 127 5e-24
seq181690 127 5e-24
seq93507 111 4e-19
seq188063 107 5e-18
seq156113 102 2e-16
seq183834 87.8 4e-12
seq71275 87.8 4e-12
>seq116321
Length=1411
Score = 145 bits (160), Expect = 2e-29
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|||||||| |||||||| |||| |||||||| || | || | ||||| || |||||
Sbjct 838 TGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCGAGGGTACGGCCATCCTCGAGCTGT 779
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
||||||||||||||||| | ||||||||| || || || ||| || ||||||||
Sbjct 778 TTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCTTGAATCTTA 719
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||||||| |||| |||||||| | || || ||||| || || ||||| || |||
Sbjct 718 GCCTTCACGTTATCGATGGTGTCTGAACTCTCGACCTCCAAGGTAATAGTCTTTCCGGTG 659
Query 199607 AGAGTTTTCACAAAAATTTG 199626
|| ||||||||||| || ||
Sbjct 658 AGGGTTTTCACAAAGATCTG 639
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || || ||||| |||| |||||| |||||||| || | ||||||
Sbjct 1303 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCT 1244
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||||||||||||||| | |||||| ||||| || || || |||
Sbjct 1243 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC 1184
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || ||||| || || |||
Sbjct 1183 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCGACCTCCAAGGTAATGGTC 1124
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || || || ||
Sbjct 1123 TTTCCGGTCAGGGTCTTGACGAAGATCTG 1095
Score = 100 bits (110), Expect = 7e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || || |||||||| || | ||||| || ||||| |||| || || || || ||
Sbjct 1066 TGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCCAAGGTCCGACCGTCCTCGAGTTGT 1007
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
||||||||||||||||| | ||||||||| || || || || ||||| |||||
Sbjct 1006 TTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTA 947
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| ||| |||| ||| |||| | || || ||||| ||||| ||||| || ||
Sbjct 946 GCCTTGACGTTATCGATGGTATCTGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCGGTC 887
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| || || || || || ||
Sbjct 886 AAGGTCTTGACGAAGATCTG 867
>seq176217
Length=4970
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || |||||||||||||||| |||||| || || | ||||| |||||
Sbjct 2307 AGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAATCCGCTAGGGTCCTCCCATCC 2366
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||| || || || || ||||| || | |||||||||||| ||| ||||| ||
Sbjct 2367 TCCAGTTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCTTCCTTATCT 2426
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| ||| || | || || | |||| || ||||| ||||| |||
Sbjct 2427 TGGATCTTTGCCTTAACGTTATCAATTGTATCGGAACTTTCCACCTCCAAAGTGATGGTC 2486
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||||||||| || |||||
Sbjct 2487 TTCCCGGTGAGAGTTTTCACGAATATTTG 2515
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| || || ||||||||||||| |||||| || || | || | |||||
Sbjct 2763 AGGACCAAGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGGCCATCC 2822
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| ||||| ||||| || | |||||||| || ||||||||| |||
Sbjct 2823 TCGAGTTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCC 2882
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || ||| || | ||||| | |||| || ||||| ||||| ||
Sbjct 2883 TGGATCTTAGCTTTGACGTTATCAATAGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTT 2942
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || |||||||| || || ||
Sbjct 2943 TTTCCTGTCAGGGTTTTCACGAAGATCTG 2971
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| ||||| || |||||||||| ||| ||||| || | || | || || |||||||||
Sbjct 1860 TGAAGAGTGGATTCCTTTTGGATGTTATAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGC 1919
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || |||||||| | | |||||| ||||| ||| || || || || |||||
Sbjct 1920 TTGCCTGCGAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCCTTATCTTGGATCTTC 1979
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| || || | || || | | || || ||||| || || ||||| || ||
Sbjct 1980 GCCTTGACATTATCAATTGTATCGGAACTCTCAACCTCCAAGGTTATAGTCTTCCCGGTC 2039
Query 199607 AGAGTTTTCACAAAAATTTG 199626
| || ||||||||||| ||
Sbjct 2040 AATGTCTTCACAAAAATCTG 2059
>seq194543
Length=10949
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| || ||||| |||| ||| || || || ||||||| ||||||
Sbjct 3465 AGGACTAGGTGAAGAGTGGATTCCTTCTGGATGTTATAATCGGCTAAAGTCCGCCCATCT 3406
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||| |||||||| |||||||| || | |||||| || ||| || ||||| |||
Sbjct 3405 TCCAGTTGCTTTCCAGCGAAGATTAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCC 3346
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| |||| ||||| | |||| || || | ||||||||||
Sbjct 3345 TGGATTTTCGCCTTGACGTTGTCGATAGTGTCGGAGCTTTCGACCTCGAGCGTGATCGTC 3286
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || ||||| || || || ||
Sbjct 3285 TTGCCAGTCAGGGTTTTGACGAAGATCTG 3257
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || || ||||| || || | |||||| || || | || | || ||
Sbjct 3237 AGGACGAGGTGAAGCGTGGACTCTTTCTGTATGTTGTAATCGGCGAGCGTACGGCCGTCC 3178
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| ||||| || ||||| ||||||||||| |||||| |||||||| |||
Sbjct 3177 TCGAGCTGTTTTCCAGCAAAGATTAGACGCTGCTGATCCGGAGGGATTCCTTCCTTATCC 3118
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| |||||| |||| || || | |||| || || | ||||| |||
Sbjct 3117 TGGATCTTTGCTTTCACGTTGTCGATAGTATCGGAGCTTTCGACCTCGAGGGTGATTGTC 3058
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || |||||||| || || ||
Sbjct 3057 TTACCAGTTAGGGTTTTCACGAAGATCTG 3029
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
||||| || || || | ||||||||||| |||| || || || || | |||| |||
Sbjct 3696 CTCAGCACCAGATGCAACGTCGACTCCTTCTGGATATTATAATCTGCTAGGGTCCGCCCA 3637
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||||| |||||| ||||| || || | ||||||||| || ||| ||| ||||||
Sbjct 3636 TCTTCCAACTGCTTACCGGCAAAAATCAAACGCTGCTGATCTGGAGGAATCCCTTCTTTA 3577
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| || || || ||| || |||| || || | | || || ||||| || ||
Sbjct 3576 TCTTGGATTTTGGCCTTGACATTATCGATAGTATCAGAGCTCTCGACTTCCAAGGTAATT 3517
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || |||||
Sbjct 3516 GTTTTGCCAGTAAGGGTTTTGACGAAGATTTG 3485
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||||||||| || |||||||| |||| || || ||||| | ||||| ||||||
Sbjct 3921 AGGACAAGGTGGAGGGTTGACTCCTTCTGGATATTATAATCAGCTAGAGTCCGCCCATCT 3862
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || || || || | | ||| || || || ||| || || |||
Sbjct 3861 TCCAACTGCTTCCCAGCAAAAATCAATCTCTGTTGATCAGGCGGAATCCCCTCCTTATCC 3802
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| || | || || | | || || |||| || || |||
Sbjct 3801 TGTATCTTAGCCTTCACATTGTCAATTGTATCAGAACTCTCCACCTCCAGAGTAATTGTC 3742
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || ||||| || ||
Sbjct 3741 TTCCCAGTCAAAGTCTTGACAAATATCTG 3713
Score = 91.5 bits (100), Expect = 3e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| |||||||| |||||||| |||||||||| ||||||| |||||||| ||| |||||
Sbjct 3380 CTAATCTTCGCTGGAAAGCAACTGGAAGATGGGCGGACTTTAGCCGATTATAACATCCAG 3439
Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017
|| || || ||||||||||| ||
Sbjct 3440 AAGGAATCCACTCTTCACCTAGT 3462
>seq160375
Length=3367
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || || ||||| || | ||||||||||||||| || | |||||
Sbjct 713 AGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCC 772
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||||||||||||||| | |||||||||||| || || || |||
Sbjct 773 TCAAGTTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 832
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || ||||| ||||| |||
Sbjct 833 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATTGTC 892
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || |||||||| || ||
Sbjct 893 TTGCCGGTCAAGGTCTTCACAAAGATCTG 921
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || || ||||| |||| |||||||||||||| || | |||||
Sbjct 257 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCCAAGGTACGGCCATCC 316
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| ||||||||||| | |||||| ||||| || || || |||
Sbjct 317 TCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTATCC 376
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| || | |||||| | | || || ||||| ||||| |||
Sbjct 377 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATTGTC 436
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || ||||| ||||| ||
Sbjct 437 TTTCCAGTCAAGGTCTTCACGAAAATCTG 465
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || |||||||| |||| |||||| |||||||| || | || ||
Sbjct 1169 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCGTCC 1228
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||||| ||||| || || | ||||||||| || ||||| || ||
Sbjct 1229 TCCAATTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 1288
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| || ||||||| || | |||||| | |||| || ||||| ||||| |||
Sbjct 1289 TGAATTTTAGCCTTCACGTTATCAATGGTGTCGGAGCTTTCCACCTCCAAGGTGATGGTC 1348
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| ||||||||||| || ||
Sbjct 1349 TTGCCGGTGAGGGTTTTCACAAAGATCTG 1377
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||| || || || ||||| || || | |||||| |||||||| || | |||||
Sbjct 29 AGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTACGGCCATCC 88
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || ||||||||||| | |||||| ||||| || || || |||
Sbjct 89 TCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTATCC 148
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| || | ||||| | | || || ||||| ||||| ||
Sbjct 149 TGGATCTTGGCCTTCACGTTGTCAATTGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTT 208
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| |||||||| || || ||
Sbjct 209 TTGCCGGTGAGGGTTTTCACGAAGATCTG 237
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||| || || ||||| |||| ||||||||||||||| || | |||||
Sbjct 941 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCC 1000
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||||||||||||||| | ||||||||| || || || || ||
Sbjct 1001 TCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCT 1060
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| || ||||||| || | ||||| | | || || ||||| ||||| |||
Sbjct 1061 TGAATTTTCGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTC 1120
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || ||||| || ||
Sbjct 1121 TTGCCGGTCAAGGTCTTAACAAAGATCTG 1149
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || || ||||| |||| ||| || |||||||| || | ||||||
Sbjct 485 AGCACCAAGTGTAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAAGGTACGGCCATCT 544
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||||||||||||||| | |||||| ||||| || || || |||
Sbjct 545 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC 604
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || ||||| ||||| ||
Sbjct 605 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTT 664
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || || ||||| || ||
Sbjct 665 TTGCCGGTCAAGGTCTTAACAAAGATCTG 693
>seq155647
Length=3035
Score = 129 bits (142), Expect = 1e-24
Identities = 162/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || ||||| || ||||||||||| |||| ||||||||| || | |||| || ||
Sbjct 2222 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCGACCGTC 2163
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|| ||||| || || ||||||||||| || ||||||||||| || ||||| ||
Sbjct 2162 CTCGAGCTGTTTGCCAGCGAAGATGAGGCGTTGCTGGTCCGGTGGGATGCCTTCCTTGTC 2103
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || |||| |||||| | | ||| || || | || || ||
Sbjct 2102 CTGGATCTTAGCCTTGACATTGTCGATGGTGTCCGAGGATTCAACCTCGAGAGTTATGGT 2043
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAGC 199638
||||||||| || ||||| || || || || |||||| ||
Sbjct 2042 CTTACCCGTTAGGGTTTTGACGAAGATCTG---CATTTTTGC 2004
>seq194317
Length=10706
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| || || ||||| |||| ||||||||| || | |||
Sbjct 1312 CGAAGGCGGAGGACGAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGGCTAGAGTT 1371
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
||||| || ||||||||||| ||||||||||| || ||||| ||||| || || |||
Sbjct 1372 CTTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCTGGTGGTATGCCT 1431
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||| |||||| || || |||| |||||| | | ||| || || |
Sbjct 1432 TCTTTGTCCTGGATCTTTGCTTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCTAGG 1491
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||||| || || || ||
Sbjct 1492 GTTATGGTTTTCCCGGTTAAGGTTTTGACGAAGATCTG 1529
>seq181690
Length=5866
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || ||||||||||| || | |||||||||||| ||||||
Sbjct 2741 CGAAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCTAAAGTC 2800
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||| |||| || || || || ||||| | | |||||| ||||| ||| ||
Sbjct 2801 CTTCCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGATCCGGCGGAATACCC 2860
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| |||||||| ||| ||| ||| || | ||||||| | || || |||||
Sbjct 2861 TCCTTGTCCTGAATTTTTGCCTTTACGTTGTCAATTGTGTCTGAACTCTCCACCTCCAAA 2920
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | || || ||||| |||||
Sbjct 2921 GTGATAGTCTTGCCTGTCAAGGTCTTAACAAAGATTTG 2958
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | || || || || |||||||||| ||| |||||||| | || | || ||
Sbjct 2522 AGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTATAGTCAGCGAGGGTACGGCCGTCC 2581
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||||||||| || ||||| | | |||||| || || ||| || ||| ||
Sbjct 2582 TCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCTGGCGGAATACCCTCTTTGTCT 2641
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||||||| ||||||| || | ||||| | | || || ||||| ||||| |||
Sbjct 2642 TGAATCTTTGACTTCACGTTATCAATAGTGTCAGAGTTCTCCACTTCCAAAGTGATGGTC 2701
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | || ||||| ||||| ||
Sbjct 2702 TTCCCTGTCAATGTCTTCACGAAAATCTG 2730
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || ||||||||||||| ||||| ||||| | ||||| |||||
Sbjct 3434 AGAACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCTAGGGTCCTCCCATCC 3493
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| ||| || || || ||||| || | |||||||| || ||| ||||| ||
Sbjct 3494 TCCAACTGTTTCCCTGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTATCT 3553
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| || || | || || | |||| || || | ||||| |||
Sbjct 3554 TGGATCTTTGCCTTGACATTATCAATTGTATCAGAGCTTTCCACCTCAAGGGTGATGGTC 3613
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||||||||| || ||
Sbjct 3614 TTACCGGTGAGGGTTTTCACAAAGATCTG 3642
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486
|| || |||||||||||||||| ||||| ||||| | ||||| ||||| |||| |||
Sbjct 3215 TGAAGGGTCGACTCCTTTTGGATATTGTAATCAGCTAGGGTCCTCCCATCCTCCAACTGT 3274
Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546
|| || || ||||| || | |||||||| || || || || || |||||||||
Sbjct 3275 TTCCCTGCAAAGATAAGCCTTTGCTGGTCTGGGGGGATCCCCTCCTTATCTTGAATCTTT 3334
Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606
||| ||| || | ||| || | | || || || | || || ||||| || |||
Sbjct 3335 GCCTTAACGTTGTCAATGGTATCCGAACTCTCCACCTCAAGGGTTATGGTCTTCCCTGTG 3394
Query 199607 AGAGTTTTCACAAAAATTTG 199626
|| ||||||||||| |||||
Sbjct 3395 AGGGTTTTCACAAATATTTG 3414
Score = 100 bits (110), Expect = 7e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | ||| || ||||| |||||||| | ||||| || || | || | ||| ||
Sbjct 2977 CAGAACCAAGTGAAGGGTCGATTCCTTTTGAATATTGTAATCCGCAAGGGTGCGTCCGTC 3036
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| ||||| ||||| || ||||| || | |||||||| || || || || ||
Sbjct 3037 TTCAAGCTGTTTTCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTATC 3096
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| ||| ||| || | ||| || | | || || || | || || ||
Sbjct 3097 TTGAATCTTTGCCTTAACGTTGTCAATGGTATCCGAACTCTCCACTTCAAGGGTTATGGT 3156
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| |||||
Sbjct 3157 CTTCCCTGTGAGGGTTTTCACAAATATTTG 3186
>seq93507
Length=917
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||||| || || |||||||||| |||||| || || | || | || ||
Sbjct 620 AGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGCAAGGGTACGGCCGTCC 679
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||||||||||||||| | |||||||| || ||| ||||| ||
Sbjct 680 TCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATCCCTTCCTTGTCT 739
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || ||| |||| ||| || | ||| | || | |||||| |||
Sbjct 740 TGGATCTTAGCGTTGACGTTATCGATGGTATCGGAGCTTTTCTCCTCAAGCGTGATGGTC 799
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || |||||||||||||| ||
Sbjct 800 TTGCCGGTTAGGGTTTTCACAAAAATCTG 828
>seq188063
Length=7454
Score = 107 bits (118), Expect = 5e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||||| || || |||||||||| |||||| || || | || | || ||
Sbjct 525 AGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGCAAGGGTACGACCGTCC 584
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||||||||||||||| | |||||||| || ||| ||||| ||
Sbjct 585 TCGAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATCCCTTCCTTGTCT 644
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || ||| |||| ||| || | ||| | || | |||||| |||
Sbjct 645 TGGATCTTAGCTTTGACGTTATCGATGGTATCAGAGCTTTTCTCCTCAAGCGTGATGGTC 704
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || |||||||| ||||| ||
Sbjct 705 TTGCCGGTTAGGGTTTTCACGAAAATCTG 733
>seq156113
Length=3066
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||||||||| || |||||||| |||| ||| || ||||||| ||||| ||||||
Sbjct 1325 AGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCCAGAGTCCGCCCATCT 1266
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| ||||| || ||||| || | | |||||| || || ||| || || |||
Sbjct 1265 TCCAATTGCTTCCCAGCGAAAATCAACCTCTGCTGATCAGGCGGAATCCCCTCCTTATCC 1206
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || || | || || | | || || |||| || || |||
Sbjct 1205 TGTATCTTAGCCTTTACATTGTCAATCGTATCAGAGCTCTCCACCTCCAGAGTAATTGTC 1146
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || ||||| || ||
Sbjct 1145 TTCCCAGTCAAAGTCTTGACAAATATCTG 1117
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
||||| || || || | ||||||||||| |||| ||| || || || | || | |||
Sbjct 1100 CTCAGCACCAGATGCAACGTCGACTCCTTCTGGATGTTATAATCCGCTAGGGTTCGCCCA 1041
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||||| ||||| || ||||| || | |||||||| |||||| ||| |||||
Sbjct 1040 TCTTCCAATTGCTTACCAGCGAAAATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTG 981
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| || || || ||| || |||| || || | | || || ||||| |||||
Sbjct 980 TCTTGGATTTTGGCCTTTACATTGTCGATAGTATCGGAGCTCTCGACTTCCAAGGTGATT 921
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || || ||
Sbjct 920 GTTTTGCCGGTTAGGGTTTTGACGAAGATCTG 889
Score = 86.0 bits (94), Expect = 1e-11
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997
|| ||||| || ||||| ||||||||||| ||||| |||| ||||| ||| |||||||
Sbjct 1243 ATTTTCGCTGGGAAGCAATTGGAAGATGGGCGGACTCTGGCTGATTATAACATCCAGAAG 1302
Query 200998 GAGTCTACTCTTCACCTTGT 201017
|||||||| || ||||||||
Sbjct 1303 GAGTCTACCCTCCACCTTGT 1322
>seq183834
Length=6310
Score = 87.8 bits (96), Expect = 4e-12
Identities = 136/193 (70%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | ||| || ||||| ||||| |||| |||||| || || | | | ||| ||
Sbjct 854 CAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGCAAGGGGGCGTCCGTC 795
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|| ||||||||||||||||||| || | |||||||| || ||| ||||| | ||
Sbjct 794 CTCGAGCTGCTTTCCGGCGAAGACAAGCCTTTGCTGGTCGGGGGGAATCCCTTCCCTGTC 735
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| |||||| ||| || | ||| ||| || | ||| | || | ||||||||
Sbjct 734 TTGGATCTTTGCCTTGAC-GTGCCGATGGTTTCGGAGCCTTCCCCCTCAAGGGTGATCGT 676
Query 199597 CTTACCCGTGAGA 199609
||| || || |||
Sbjct 675 CTTGCCAGTTAGA 663
>seq71275
Length=601
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/90 (82%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| ||||||||| || | || | |||||||| ||||| ||||||||||||
Sbjct 238 CCTTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAG 179
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| || | ||||||||||||| |||||||
Sbjct 178 ATCAGCCTCTGCTGGTCCGGAGGAATTCCT 149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1175897547098601
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