Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq197427 163 5e-35
>seq197427
Length=19924
Score = 163 bits (180), Expect = 5e-35
Identities = 382/573 (67%), Gaps = 20/573 (3%)
Strand=Plus/Plus
Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181
|| |||| ||||||||| || | ||||||||||||||| | ||| | | ||||||||
Sbjct 13952 TACAGCAAGCAGGCAAAATCGCAGTGCAAGCCTTCGTCTCTTGAGATCAACTCGTTGGAG 14011
Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241
||| | |||||||| | ||| | || |||||||||||| || || ||| ||
Sbjct 14012 AAGGTCAACCCAGGCATCAACCCGCGCTTTTTGAGCCAGAAGATCGCGCAGAAGCTCCCG 14071
Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC 48301
|||||||| || || || || || || || || | ||| ||||||| ||
Sbjct 14072 GAGAAGAAAATCCCTTCGACGCAAGCAAAGGCAACGATTCGCTCGGCGAAAGACTCGCCA 14131
Query 48302 TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361
||| |||||| || ||||| | |||||||| | | ||| || ||||||||
Sbjct 14132 CCGTC---GATCCACTTGAGGGCCCACTTGGCCTTCTTTTCCACGCAAGGGATCGTCTCG 14188
Query 48362 ATGGCCCGGAAGAGC---TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCA-- 48416
|| || |||| ||| | ||| ||| | ||| | || | |||||
Sbjct 14189 ATCGCGTGGAAAAGCCGGTCCTT---CTCGTTAGAATCCTTGATGTACGACTCGAGCAAG 14245
Query 48417 --GCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGC 48474
||| |||||| || ||||| | ||||| || ||||| ||||| ||||| |||||
Sbjct 14246 AGGCT----GTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAAAAGGC 14301
Query 48475 CCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTAT 48534
||||||||| ||||| || || | ||| || | ||| ||||| ||| ||
Sbjct 14302 TCTGGCCTCAGCTACCTGGACCTCCTTCATGAACCTGCCGGCCAGGTTCTCCAAGACGAT 14361
Query 48535 CCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT 48594
|| || || || || |||||||| ||||| || | | ||| || ||||||| || |||
Sbjct 14362 ACCGTCAGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAGTGTCGCTCGTCGTCGGT 14421
Query 48595 GAGAG---CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAA 48651
|| | | | |||| | | ||| | || || |||||||| | ||||||||
Sbjct 14422 CAGGGTTTCCTCCCAGTGGCGGAGGTCGGAGGAGAGATCGACTTCTTCAGCCGTCCAGAA 14481
Query 48652 GGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
||| || |||||| |||||||| |||| ||
Sbjct 14482 GGAGGCTTCTGCTTTCTTGTACATTTCCCAGAT 14514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 929201604235520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |