Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq181690 136 4e-27
seq194317 132 4e-26
seq176217 131 2e-25
seq156113 123 2e-23
seq194543 120 3e-22
seq155647 118 1e-21
seq160375 113 4e-20
seq93507 105 6e-18
seq188063 100 3e-16
seq116321 100 3e-16
seq183834 86.0 6e-12
>seq181690
Length=5866
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | ||||| || |||||||| || || || || || || ||| | |
Sbjct 3646 GATGCAGATCTTTGTGAAAACCCTCACCGGTAAGACCATCACCCTTGAGGTGGAAAGCTC 3587
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || | || || |||||||||||| || ||||| || || || || ||
Sbjct 3586 TGATACAATTGATAATGTCAAGGCAAAGATCCAAGATAAGGAAGGGATTCCCCCAGACCA 3527
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | |||||||| ||||||||| |||||||| ||| | | | | ||||| ||
Sbjct 3526 GCAAAGGCTTATCTTTGCAGGGAAACAGTTGGAGGATGGGAGGACCCTAGCTGATTACAA 3467
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
|| |||||||| || || || ||||||||
Sbjct 3466 TATCCAAAAGGAGTCAACCCTTCACTTGGT 3437
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| |||| || | || || || ||||| || | || || || |
Sbjct 2961 ATGCAAATCTTTGTTAAGACCTTGACAGGCAAGACTATCACTTTGGAGGTGGAGAGTTCA 2902
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | ||||| ||| || || ||||| || || || || || |||||
Sbjct 2901 GACACAATTGACAACGTAAAGGCAAAAATTCAGGACAAGGAGGGTATTCCGCCGGATCAG 2842
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| |||||||| |||||||| || | | | || || |||
Sbjct 2841 CAGAGGTTGATCTTTGCAGGGAAACAATTGGAGGATGGAAGGACTTTAGCTGACTACAAC 2782
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| ||||| ||||| || |||||||||
Sbjct 2781 ATTCAGAAGGAGTCGACCCTTCACTTGGTG 2752
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || | || || || || || || | ||||| || | |
Sbjct 2734 GATGCAGATTTTCGTGAAGACATTGACAGGGAAGACCATCACTTTGGAAGTGGAGAACTC 2675
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||| ||||||||||| || || || || |||||
Sbjct 2674 TGACACTATTGATAACGTGAAGTCAAAGATTCAAGACAAAGAGGGTATTCCGCCAGATCA 2615
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || || ||||||||||| | | | | | || |||||
Sbjct 2614 GCAGAGATTGATCTTTGCAGGAAAGCAGCTGGAGGACGGCCGTACCCTCGCTGACTATAA 2555
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| ||||||||||| || || || |||||
Sbjct 2554 CATCCAAAAGGAATCCACCCTTCATTTGGT 2525
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | ||||| || || || || || || || || ||||| || |
Sbjct 3189 ATGCAAATATTTGTGAAAACCCTCACAGGGAAGACCATAACCCTTGAAGTGGAGAGTTCG 3130
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| |||| ||| ||||| || || || || || || || ||
Sbjct 3129 GATACCATTGACAACGTTAAGGCAAA-GATTCAAGATAAGGAGGGGATCCCACCAGACCA 3071
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | |||||||| || |||||||| || || | | | | | ||||| ||
Sbjct 3070 GCAAAGGCTTATCTTTGCTGGAAAACAGCTTGAAGACGGACGCACCCTTGCGGATTACAA 3011
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||||||||||| || |||||||| |||| ||
Sbjct 3010 TATTCAAAAGGAATCGACCCTTCACTTGGTTCTGCGTTT 2972
>seq194317
Length=10706
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| ||||||| ||||| || || || || || ||| || |
Sbjct 1533 GATGCAGATCTTCGTCAAAACCTTAACCGGGAAAACCATAACCCTAGAGGTTGAATCCTC 1474
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| ||||||||| ||||||||||| ||||| || || ||
Sbjct 1473 TGACACCATCGACAATGTCAAAGCAAAGATCCAGGACAAAGAAGGCATACCACCAGACCA 1414
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| || | ||||| ||||| || ||||||||||| |||| | | || || ||
Sbjct 1413 ACAGCGCCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGAAGAACTCTAGCCGACTACAA 1354
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || |||||||| || || ||| | || | || | ||||| ||
Sbjct 1353 CATCCAGAAGGAATCCACGCTCCACCTCGTCCTCCGCCTTCGCGGCGG 1306
>seq176217
Length=4970
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| || ||||| || || || || | || || ||| ||
Sbjct 2518 ATGCAAATATTCGTGAAAACTCTCACCGGGAAGACCATCACTTTGGAGGTGGAAAGTTCC 2459
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| | || |||| ||| |||| ||||||||| || ||||| || || || || ||
Sbjct 2458 GATACAATTGATAACGTTAAGGCAAA-GATCCAAGATAAGGAAGGGATTCCCCCGGACCA 2400
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| |||||||| ||||||||| ||| | | | | ||||| ||
Sbjct 2399 GCAGAGGCTGATCTTTGCTGGGAAACAACTGGAGGATGGGAGGACCCTAGCGGATTACAA 2340
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| |||||||| ||||| || ||||||||| | || || | ||||||
Sbjct 2339 CATCCAAAAGGAGTCGACCCTGCACTTGGTGCTTCGTCTGAGGGGAGGC 2291
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| || || || ||||| || || | || || ||| | |
Sbjct 2975 GATGCAGATCTTCGTGAAAACCCTGACAGGAAAAACCATCACTTTGGAGGTCGAAAGCTC 2916
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| |||||||| ||||| |||||||| || || || ||
Sbjct 2915 TGACACTATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCA 2856
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | ||||||||||| || || || |||||| | | | | | ||||| ||
Sbjct 2855 GCAAAGGCTTATCTTTGCCGGCAAGCAACTCGAGGATGGCCGTACCCTTGCCGATTACAA 2796
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| |||||||| || || || ||||||||
Sbjct 2795 CATCCAAAAGGAGTCAACCCTTCACTTGGT 2766
Score = 109 bits (120), Expect = 5e-19
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || || || || || || || || | ||||||||||| ||||||
Sbjct 2206 AAGATCCAAGACAAGGAGGGGATCCCGCCAGACCAGCAGAGGTTGATCTTTGCAGGGAAA 2147
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| |||||||| ||| | | | || || |||||||| ||||||||||| || |||
Sbjct 2146 CAATTGGAGGATGGGAGGACTTTAGCCGACTACAACATTCAGAAGGAATCGACCCTTCAC 2087
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|||||| |||| | ||||| ||
Sbjct 2086 TTGGTGCTGCGTCTACGCGGTGG 2064
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || | ||||| || ||||| || | || || || ||
Sbjct 2062 ATGCAGATTTTTGTGAAGACATTGACCGGGAAGACTATAACCTTGGAGGTTGAGAGTTCC 2003
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | || | || || ||||||||||| || || || || || || |||||
Sbjct 2002 GATACAATTGATAATGTCAAGGCGAAGATCCAAGATAAGGAGGGGATTCCACCGGATCAG 1943
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||| || || || ||||||||||| | | | | | || ||||||
Sbjct 1942 CAGAGGTTGATCTTCGCAGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCCGACTATAAC 1883
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| ||||||||||| || || || ||||||
Sbjct 1882 ATCCAAAAGGAATCCACTCTTCATTTGGTG 1853
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || || || ||||| || || | || || ||| | |
Sbjct 2746 ATGCAAATATTCGTGAAGACCCTGACAGGAAAAACCATCACTTTAGAGGTCGAAAGCTCT 2687
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || ||| |||||||| ||||| |||||||| || || || ||
Sbjct 2686 GACACAATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 2627
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | | || |||||||| || || || ||||| | | | | | ||||| ||
Sbjct 2626 CAAAGGCTTATTTTTGCCGGCAAGCAACTCGAGGACGGCCGTACCCTTGCCGATTACAAT 2567
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| ||||||||||| || || || ||||||
Sbjct 2566 ATCCAAAAGGAATCCACCCTCCATTTGGTG 2537
>seq156113
Length=3066
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| |||||||| ||||| || || | ||||| || | |
Sbjct 885 GATGCAGATCTTCGTCAAAACCCTAACCGGCAAAACAATCACCTTGGAAGTCGAGAGCTC 944
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||| || | || | ||||| || ||||||||||| ||||| || ||||| |||||
Sbjct 945 CGATACTATCGACAATGTAAAGGCCAAAATCCAAGACAAGGAAGGGATTCCTCCGGATCA 1004
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||| || || || || || |||| ||| | ||| | | | ||||||||
Sbjct 1005 GCAGCGGTTGATTTTCGCTGGTAAGCAATTGGAAGATGGGCGAACCCTAGCGGATTATAA 1064
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| ||||| | || ||||| || | ||| | || ||
Sbjct 1065 CATCCAGAAGGAGTCGACGTTGCATCTGGTGCTGAGGTTGAGGGGTGG 1112
>seq194543
Length=10949
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| ||||| ||||| || || || ||||| || ||| | |
Sbjct 3025 GATGCAGATCTTCGTGAAAACCCTAACTGGTAAGACAATCACCCTCGAGGTCGAAAGCTC 3084
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||| || | || | || ||| ||||||||| || || |||||||| ||||| |||||
Sbjct 3085 CGATACTATCGACAACGTGAAAGCAAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCA 3144
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | |||||||| || |||||||| ||||| | | | | ||||| ||
Sbjct 3145 GCAGCGTCTAATCTTTGCTGGAAAACAGCTCGAGGACGGCCGTACGCTCGCCGATTACAA 3204
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || || || || || || ||| | || | || | ||||| |||
Sbjct 3205 CATACAGAAAGAGTCCACGCTTCACCTCGTCCTCCGTCTACGCGGCGGC 3253
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || || || || || |||||||| || ||| | ||
Sbjct 3254 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAAAGCTCC 3313
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||| ||||| ||||| || ||||| |||||
Sbjct 3314 GACACTATCGACAACGTCAAGGCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 3372
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||| || || || || ||||| ||| | | | | | ||||||||
Sbjct 3373 GCAGAGGCTAATCTTCGCTGGAAAGCAACTGGAAGATGGGCGGACTTTAGCCGATTATAA 3432
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
||| || |||||||| || || |||
Sbjct 3433 CATCCAGAAGGAATCCACTCTTCAC 3457
>seq155647
Length=3035
Score = 118 bits (130), Expect = 1e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| ||||| ||||| || || || ||||| || ||| || |
Sbjct 2010 ATGCAGATCTTCGTCAAAACCCTAACGGGTAAGACCATAACTCTCGAGGTTGAATCCTCG 2069
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || || || ||
Sbjct 2070 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCACCGGACCAG 2129
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| | ||||| || || |||||||| ||||| | | | | | || || |||
Sbjct 2130 CAACGCCTCATCTTCGCTGGCAAACAGCTCGAGGACGGTCGGACCCTAGCCGACTACAAC 2189
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| ||||| || ||| ||||| ||||
Sbjct 2190 ATCCAGAAGGAGTCGACGCTTCACCTGGTGCTGCG 2224
>seq160375
Length=3367
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || | ||||| ||||| || || | || || || | ||
Sbjct 696 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAAACCATCACCTTGGAGGTTGAGAGCTCC 637
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 636 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGATCAG 577
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| ||||| || ||||| || ||| | | | || | |||||||||
Sbjct 576 CAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACCTTGGCTGATTATAAC 517
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || |||||||| || ||||||||||||
Sbjct 516 ATCCAGAAGGAATCCACCCTACACTTGGTG 487
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || | ||||| || || || || | || || || | ||
Sbjct 1152 ATGCAGATCTTTGTTAAGACCTTGACCGGCAAGACCATCACCTTGGAGGTGGAGAGCTCC 1093
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| || |||||||| || || || || || || ||
Sbjct 1092 GACACTATTGATAACGTGAAGGCGAAA-ATTCAAGACAAGGAGGGTATCCCACCAGACCA 1034
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||| ||||| || ||||| |||||| | | | || | || || ||
Sbjct 1033 GCAGAGGCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACCTTGGCTGACTACAA 974
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || |||||||| || || ||||||||| | || | || || |||
Sbjct 973 CATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGCCTCCGTGGTGGC 925
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/226 (70%), Gaps = 3/226 (1%)
Strand=Plus/Minus
Query 24690 AACTGATTGATAC-GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTC 24748
|| ||||| ||| ||||||||||||| | ||||| || ||||| || || || || |
Sbjct 1395 AATTGATTCGTACAGATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCTTG 1336
Query 24749 GAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGG 24807
|| || ||| | ||||||| | || |||| || | ||| || |||||||| || ||
Sbjct 1335 GAGGTGGAAAGCTCCGACACCATTGATAACGTGAAGGCTAAA-ATTCAAGACAAGGAGGG 1277
Query 24808 AATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAA 24867
||| || || || || || | | || || || || || || ||||||| | |
Sbjct 1276 AATCCCACCAGACCAGCAGAGGCTTATTTTCGCTGGAAAGCAATTGGAGGACGGCCGTAC 1217
Query 24868 CATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913
| || | ||||| ||||| || ||||| || || || |||||||||
Sbjct 1216 CTTGGCTGATTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTG 1171
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | ||||| || || || || | || || || | ||
Sbjct 924 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACAATCACTTTGGAGGTTGAGAGCTCC 865
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 864 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGACCAG 805
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| ||||| || || || |||||| | | | || | || || |||
Sbjct 804 CAGAGGCTCATCTTCGCCGGAAAGCAACTTGAGGATGGCCGTACCTTGGCTGACTACAAC 745
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| |||||||| || || |||||||||
Sbjct 744 ATTCAGAAGGAATCCACCCTCCACTTGGTG 715
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || ||||| ||||| || || | || || || | ||
Sbjct 240 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAAACCATCACCTTGGAGGTTGAGAGCTCC 181
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || |||||||| || || || || || || || |||||
Sbjct 180 GACACAATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCGGATCAG 121
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| || || || ||||| |||||| | | | || | ||||| |||
Sbjct 120 CAGAGGCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGTACCTTGGCTGATTACAAC 61
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| || || || || || || ||||
Sbjct 60 ATTCAGAAAGAGTCCACCCTGCATCTTG 33
>seq93507
Length=917
Score = 105 bits (116), Expect = 6e-18
Identities = 153/215 (71%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 24699 ATAC-GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAA 24757
|||| ||||||||| ||| | ||||| |||||||| || || || ||||| || | ||
Sbjct 837 ATACTGATGCAGATTTTTGTGAAAACCCTAACCGGCAAGACCATCACGCTTGAGGAGAAA 778
Query 24758 GCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCC 24817
| |||| || | || | || || |||||||||||||| ||||| || || ||
Sbjct 777 AGCTCCGATACCATCGATAACGTCAACGCTAAGATCCAAGACAAGGAAGGGATTCCACCA 718
Query 24818 GATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGAT 24877
|| || ||| | | ||||| ||||| || || || ||||| | | | | | |||
Sbjct 717 GACCAGCAAAGACTCATCTTCGCCGGAAAGCAACTTGAGGACGGCCGTACCCTTGCCGAT 658
Query 24878 TATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||| ||||||||||| || || || |||||
Sbjct 657 TACAACATCCAAAAGGAATCCACCCTCCATTTGGT 623
>seq188063
Length=7454
Score = 100 bits (110), Expect = 3e-16
Identities = 152/215 (71%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 24699 ATAC-GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAA 24757
|||| ||||||||| || | ||||| |||||||| || || || ||||| || | ||
Sbjct 742 ATACTGATGCAGATTTTCGTGAAAACCCTAACCGGCAAGACCATCACGCTTGAGGAGAAA 683
Query 24758 GCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCC 24817
| | || || | || | || ||| |||||||||||||| ||||| || || ||
Sbjct 682 AGCTCTGATACCATCGATAACGTCAAAGCTAAGATCCAAGACAAGGAAGGGATTCCACCA 623
Query 24818 GATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGAT 24877
|| || ||| | | ||||| ||||| || || || ||||| | | | | | |||
Sbjct 622 GACCAGCAAAGACTCATCTTCGCCGGAAAGCAACTCGAGGACGGTCGTACCCTTGCCGAT 563
Query 24878 TATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
|| ||||| ||||||||||| || || || |||||
Sbjct 562 TACAACATCCAAAAGGAATCCACCCTCCATTTGGT 528
>seq116321
Length=1411
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || ||||| | || || || | ||
Sbjct 1092 ATGCAGATCTTCGTCAAGACCCTGACCGGAAAGACCATTACCTTGGAGGTCGAGAGCTCC 1151
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1152 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCGGATCAG 1211
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||| ||||| || ||||| || ||| | | | || | ||||| |||
Sbjct 1212 CAGAGGCTCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGTACCTTGGCTGATTACAAC 1271
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || |||||||| || || ||||||||| | || || | || |||
Sbjct 1272 ATCCAGAAGGAATCCACCCTCCACTTGGTGCTCCGTCTGAGGGGTGGC 1319
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | ||||| || ||||| || |||||||| | || || || |
Sbjct 635 GATGCAGATCTTTGTGAAAACCCTCACCGGAAAGACTATTACCTTGGAGGTCGAGAGTTC 694
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| ||||||||||| || || || || || ||
Sbjct 695 AGACACCATCGATAACGTGAAGGCTAAGATTCAAGACAAAGAGGGGATCCCACCAGACCA 754
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||| ||||| |||||||| |||||| | | | | | || || ||
Sbjct 755 GCAGAGGCTCATCTTCGCCGGAAAACAGCTCGAGGATGGCCGTACCCTCGCCGACTACAA 814
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || || ||||||
Sbjct 815 TATCCAGAAGGAGTCAACTCTCCATTTGGTG 845
>seq183834
Length=6310
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/194 (70%), Gaps = 1/194 (1%)
Strand=Plus/Plus
Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784
||||| || || || || || || || | |||| | |||| || | | ||| ||
Sbjct 664 CTAACTGGCAAGACGATCACCCTTGAGGGGGAAGGCTCCGAAACCATCGGCACGTCAAGG 723
Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844
|||| ||||||||||| ||||| || || ||||| || ||| | | |||| |||||
Sbjct 724 CAAA-GATCCAAGACAGGGAAGGGATTCCCCCCGACCAGCAAAGGCTTGTCTTCGCCGGA 782
Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904
|| ||||| ||||| | | | | ||||| ||||| || ||||||||||| ||
Sbjct 783 AAGCAGCTCGAGGACGGACGCCCCCTTGCGGATTACAACATCCAGAAGGAATCGACCCTT 842
Query 24905 CACTTGGTGTTGCG 24918
|||||||| ||||
Sbjct 843 CACTTGGTTCTGCG 856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448771714384840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |