Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq176217 129 4e-25
seq93507 122 5e-23
seq181690 120 2e-22
seq188063 118 7e-22
seq160375 118 7e-22
seq156113 116 2e-21
seq116321 111 1e-19
seq194543 95.1 8e-15
seq194317 89.7 3e-13
>seq176217
Length=4970
Score = 129 bits (142), Expect = 4e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || | ||||||||| |||||| |||||||| |||||||| || | |
Sbjct 1836 CCACCTCGGAGGCGAAGCACCAAATGAAGAGTGGATTCCTTTTGGATGTTATAGTCGGCA 1895
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || || || || || || | ||| || ||||| ||
Sbjct 1896 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGATCCGGTGGA 1955
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||||| | || || || |||||| || ||||| ||
Sbjct 1956 ATCCCCTCCTTATCTTGGATCTTC-GCCTTGACATTATCAATTGTATCGGAACTCTCAAC 2014
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| |||||| || || ||||| || || |||||||||||||||||
Sbjct 2015 CTCCAAGGTTATAGTCTTCCCGGTCAATGTCTTCACAAAAATCTGCAT 2062
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| ||||| | |||||||||||| ||| |||||||| || || ||||| |
Sbjct 2519 GCCACCTCTGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATATTGTAATCGGC 2578
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || ||||| || |||||||| || | | || ||||| || ||
Sbjct 2579 AAGGGTACGGCCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGCCTTTGCTGGTCTGGGGG 2638
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| ||| |||||||| |||| || | ||| ||| || ||||||||| ||| || |
Sbjct 2639 AATTCCTTCCTTGTCCTGGATC-TTAGCTTTGACGTTATCAATTGTGTCAGAGCTTTCGA 2697
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | || || ||||| || || | || ||||| || || ||||||
Sbjct 2698 CCTCTAAAGTGATGGTTTTTCCTGTCAGGGTCTTCACGAATATTTGCATG 2747
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||| || || || ||||| |||||||| || || | | || | |
Sbjct 2073 AGACGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTCCTC 2132
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | |||||| || ||||| || || | ||| ||||| ||||| | ||||||
Sbjct 2133 CCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGCGGGATCCCCTCC 2192
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || || || || ||||| ||||| || |||| |||
Sbjct 2193 TTGTCTTGGATC-TTCGCCTTCACATTATCGATGGTGTCCGAACTCTCAACCTCCAAGGT 2251
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| || || || || || || || || || || ||||||
Sbjct 2252 TATAGTCTTTCCAGTCAATGTCTTGACGAAGATTTGCATG 2291
>seq93507
Length=917
Score = 122 bits (134), Expect = 5e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| ||||| | ||||||||||| ||| |||||||| ||||| ||||| |
Sbjct 604 GCCACCTCTGAGACGAAGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGC 663
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| |||||||| || ||||| || || | | || ||||| || ||
Sbjct 664 AAGGGTACGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGG 723
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| || ||||||||| |||| || | || ||| || || || || ||| | |
Sbjct 724 AATCCCTTCCTTGTCTTGGATC-TTAGCGTTGACGTTATCGATGGTATCGGAGCTTTTCT 782
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || ||||||| ||||||||||||||||||||
Sbjct 783 CCTCAAGCGTGATGGTCTTGCCGGTTAGGGTTTTCACAAAAATCTGCAT 831
>seq181690
Length=5866
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| || | ||||| ||||| || || || ||||||||||| || ||||| | |
Sbjct 2963 CCGCCCCTTAAACGCAGAACCAAGTGAAGGGTCGATTCCTTTTGAATATTGTAATCCGCA 3022
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||||||||| ||||| || ||||| || | | || ||||| || ||
Sbjct 3023 AGGGTGCGTCCGTCTTCAAGCTGTTTTCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 3082
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| ||| |||| |||||| | ||| || || ||||||||
Sbjct 3083 ATCCCCTCCTTATCT-TGAATCTTTGCCTTAACGTTGTCAATGGTATCCGAACTCTCCAC 3141
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | |||||| || || || || | ||||||||||| || |||||
Sbjct 3142 TTCAAGGGTTATGGTCTTCCCTGTGAGGGTTTTCACAAATATTTGCAT 3189
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || | |||||||| || ||| |||||||| |||||||| || |
Sbjct 2507 CCACCTCGGAGGCGAAGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTATAGTCAGCG 2566
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || || ||||| || || | ||| || || |||||
Sbjct 2567 AGGGTACGGCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCTGGCGGA 2626
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||||| |||||| |||||| | || ||| || ||| ||||| | |||||||
Sbjct 2627 ATACCCTCTTTGTCTTGAATCTTT-GACTTCACGTTATCAATAGTGTCAGAGTTCTCCAC 2685
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || || || || || || ||||| |||||||||||
Sbjct 2686 TTCCAAAGTGATGGTCTTCCCTGTCAATGTCTTCACGAAAATCTGCAT 2733
Score = 109 bits (120), Expect = 3e-19
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG-- 34537
|| || | |||||| | |||||| || || || |||||| |||||||| || || |
Sbjct 2735 CCACCACGAAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCT 2794
Query 34538 AAAGTG-TTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
||||| ||| || || ||| |||||| || ||||| || || | ||| || ||||||
Sbjct 2795 AAAGTCCTTCCATCCTC--CAA-TTGTTTCCCTGCAAAGATCAACCTCTGCTGATCCGGC 2851
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTC 34655
|| | ||||||||||| ||| ||||| || ||| | |||||||||| |||||
Sbjct 2852 GGAATACCCTCCTTGTC-CTGAATTTTTGCCTTTACGTTGTCAATTGTGTCTGAACTCTC 2910
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| |||| || || || || || || || || || ||||| || |||||
Sbjct 2911 CACCTCCAAAGTGATAGTCTTGCCTGTCAAGGTCTTAACAAAGATTTGCAT 2961
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|||||||| ||||| | ||||| || || || ||||||||| || || ||||| |
Sbjct 3419 CCGCCTCTGAGACGAAGAACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCT 3478
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | | || || | ||||| || ||||| || | | || ||||| || ||
Sbjct 3479 AGGGTCCTCCCATCCTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGCTGGTCTGGGGGA 3538
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||| ||| ||||||| | || || || |||||| || ||| |||||
Sbjct 3539 ATCCCTTCCTTATCTTGGATCTTT-GCCTTGACATTATCAATTGTATCAGAGCTTTCCAC 3597
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || |||||||| | ||||||||||| ||||||||
Sbjct 3598 CTCAAGGGTGATGGTCTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 3645
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|||||||| ||||| | |||||||| || || ||||||||| || || ||||| |
Sbjct 3191 CCGCCTCTGAGACGAAGAACCAAATGAAGGGTCGACTCCTTTTGGATATTGTAATCAGCT 3250
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | | || || | ||||| || ||||| || | | || ||||| || ||
Sbjct 3251 AGGGTCCTCCCATCCTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGCTGGTCTGGGGGG 3310
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||||| | |||||| | ||| || || ||||||||
Sbjct 3311 ATCCCCTCCTTATCTTGAATCTTT-GCCTTAACGTTGTCAATGGTATCCGAACTCTCCAC 3369
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| || || || || | ||||||||||| || |||||
Sbjct 3370 CTCAAGGGTTATGGTCTTCCCTGTGAGGGTTTTCACAAATATTTGCAT 3417
>seq188063
Length=7454
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| ||||| | ||||||||||| ||| |||||||| ||||| ||||| |
Sbjct 509 GCCACCTCTGAGACGGAGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGC 568
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| || ||||| || ||||| || || | | || ||||| || ||
Sbjct 569 AAGGGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGG 628
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| || ||||||||| |||| || | ||| ||| || || || || ||| | |
Sbjct 629 AATCCCTTCCTTGTCTTGGATC-TTAGCTTTGACGTTATCGATGGTATCAGAGCTTTTCT 687
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || || || ||||||| |||||||| |||||||||||
Sbjct 688 CCTCAAGCGTGATGGTCTTGCCGGTTAGGGTTTTCACGAAAATCTGCAT 736
>seq160375
Length=3367
Score = 118 bits (130), Expect = 7e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || || ||| |||||| || ||||| ||||| | | || ||
Sbjct 1163 AGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAAGGTACGG 1222
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || | ||| || || || || || | | ||| ||||| || || | |||||||
Sbjct 1223 CCGTCCTCCAATTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATTCCCTCC 1282
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | || ||| || ||| ||||| ||| ||||| |||| |||
Sbjct 1283 TTGTCT-TGAATTTTAGCCTTCACGTTATCAATGGTGTCGGAGCTTTCCACCTCCAAGGT 1341
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||||||||||| ||||||||
Sbjct 1342 GATGGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 1380
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||| | |||||| ||||| ||| ||||| |||||||| || || |
Sbjct 698 CCACCCCTCAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCC 757
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | || |||||||| || ||||| || || | | ||| |||||||| ||
Sbjct 758 AAGGTACGGCCATCCTCAAGTTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGG 817
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | || ||||| |||||| ||
Sbjct 818 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAAC 876
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| || || || || ||||| || || |||||||| |||||||||
Sbjct 877 CTCCAAAGTGATTGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATG 925
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||| | |||||| || || ||| ||||| || ||||||||||| |
Sbjct 470 CCACCCCTCAGACGGAGCACCAAGTGTAGGGTGGATTCCTTCTGGATGTTATAATCAGCC 529
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | |||||||| || || ||||| || || | | ||| || ||||| ||
Sbjct 530 AAGGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGG 589
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | || ||||| |||||| ||
Sbjct 590 ATCCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAAC 648
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || ||||| ||||| || || || ||||| ||||||||
Sbjct 649 CTCCAAGGTGATGGTTTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 696
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | |||||| ||||| ||| ||||| || ||||| || || | | || ||
Sbjct 935 AGGCGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGG 994
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || ||||| || || | | ||| ||||| || || | ||||||
Sbjct 995 CCATCCTCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCC 1054
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | || ||| || ||| ||||| ||||||||| |||| |||
Sbjct 1055 TTGTCT-TGAATTTTCGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAAGGT 1113
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| || || || ||||| ||||||||
Sbjct 1114 GATGGTCTTGCCGGTCAAGGTCTTAACAAAGATCTGCAT 1152
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | |||||| ||||| ||| ||||| || || || || || |
Sbjct 241 GCCACCCCTGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGC 300
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || || | || ||||| || || || || || || | | ||| || ||||| ||
Sbjct 301 CAAGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCGGTGG 360
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| |||||||| || |||||| | || ||| | ||| ||||| |||||||
Sbjct 361 GATCCCCTCCTTATCCTGGATCTTG-GCCTTCACGTTGTCAATGGTGTCAGAACTCTCCA 419
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| ||| || || || || || || || ||||| |||||||||||
Sbjct 420 CCTCCAAGGTGATTGTCTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 468
>seq156113
Length=3066
Score = 116 bits (128), Expect = 2e-21
Identities = 160/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||||| ||| | || |||||| || ||||||||||| | || |||||| | ||
Sbjct 1098 CAGCACCAGATGCAACGTCGACTCCTTCTGGATGTTATAATCCGCTAGGGTTCGCCCATC 1039
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| | ||| ||||| || || || || ||||| || ||||| || | || ||||||||
Sbjct 1038 TTCCAATTGCTTACCAGCGAAAATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTGTC 979
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| ||| ||| | || || | || || || |||||| ||||||| ||| || |
Sbjct 978 TTGGAT-TTTGGCCTTTACATTGTCGATAGTATCGGAGCTCTCGACTTCCAAGGTGATTG 920
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATT 34713
|||| ||||||| ||||| || || |||||||| |||||
Sbjct 919 TTTTGCCGGTTAGGGTTTTGACGAAGATCTGCATCCTGATT 879
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||| || ||||||||||| | || || ||| | ||||| | |||
Sbjct 1316 TGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCCAGAGTCCGCCCATCTTCCAATTGC 1257
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTT 34622
|| || || || || || | ||| || || ||||| | |||||||| | |||| |||||
Sbjct 1256 TTCCCAGCGAAAATCAACCTCTGCTGATCAGGCGGAATCCCCTCCTTATCCTGT-ATCTT 1198
Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|||| ||| || || ||||||||| |||| || || || || || ||
Sbjct 1197 AGCCTTTACATTGTCAATCGTATCAGAGCTCTCCACCTCCAGAGTAATTGTCTTCCCAGT 1138
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| ||||||||
Sbjct 1137 CAAAGTCTTGACAAATATCTGCAT 1114
>seq116321
Length=1411
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||| | ||||||||| || || |||||| ||||| || ||||| |
Sbjct 1090 CCACCCCTGAGACGGAGCACCAAATGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCC 1031
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || |||| || |||||||| ||||| || || | | ||| ||||| || ||
Sbjct 1030 AAGGTCCGACCGTCCTCGAGTTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGG 971
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| || || || ||| |||||||||
Sbjct 970 ATACCCTCCTTGTCCTGGATC-TTAGCCTTGACGTTATCGATGGTATCTGAGCTCTCCAC 912
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || ||||| || || || || || ||||||||
Sbjct 911 CTCCAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 864
Score = 109 bits (120), Expect = 3e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||||||||| |||||| || || || || || | || || ||
Sbjct 853 AGACGAAGCACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCGAGGGTACGG 794
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| ||||| || || | | ||| ||||| || || | |||||
Sbjct 793 CCATCCTCGAGCTGTTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCT 734
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| || | || ||| || || |||||| ||||| || |||| |||
Sbjct 733 TTGTCT-TGAATCTTAGCCTTCACGTTATCGATGGTGTCTGAACTCTCGACCTCCAAGGT 675
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||||||||||| ||||||||
Sbjct 674 AATAGTCTTTCCGGTGAGGGTTTTCACAAAGATCTGCAT 636
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||| | |||||| ||||| ||| ||||| || ||||| ||||| |
Sbjct 1319 GCCACCCCTCAGACGGAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 1260
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || || | |||||||| || || ||||| || || | | ||| || ||||| ||
Sbjct 1259 CAAGGTACGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGG 1200
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | ||| ||||| |||||| |
Sbjct 1199 GATCCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCGA 1141
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||| ||| || || || ||||| | || || || || ||||||||
Sbjct 1140 CCTCCAAGGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 1092
>seq194543
Length=10949
Score = 95.1 bits (104), Expect = 8e-15
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
|| ||||| ||| | || |||||| || || |||||||||| || || ||| | ||
Sbjct 3694 CAGCACCAGATGCAACGTCGACTCCTTCTGGATATTATAATCTGCTAGGGTCCGCCCATC 3635
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||| | || ||||||||||| || |||||||| || || || || | || || || ||
Sbjct 3634 TTCCAACTGCTTACCGGCAAAAATCAAACGCTGCTGATCTGGAGGAATCCCTTCTTTATC 3575
Query 34614 TGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| ||| ||| | || || || || || || |||||| ||||||| ||| || |
Sbjct 3574 TTGGAT-TTTGGCCTTGACATTATCGATAGTATCAGAGCTCTCGACTTCCAAGGTAATTG 3516
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || | ||||| || || || |||||
Sbjct 3515 TTTTGCCAGTAAGGGTTTTGACGAAGATTTGCAT 3482
>seq194317
Length=10706
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||| || | || | ||||| ||| ||||| || ||||| || || |
Sbjct 1306 CCGCCGCGAAGGCGGAGGACGAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGGCT 1365
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| |||| || || || || ||||| || || | ||||||||||| || ||
Sbjct 1366 AGAGTTCTTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCTGGTGGT 1425
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| |||| |||| ||| || | || ||||| | || ||
Sbjct 1426 ATGCCTTCTTTGTCCTGGATC-TTTGCTTTGACATTGTCGATGGTGTCAGAGGATTCAAC 1484
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| | |||||| ||||| |||||||| ||||| || || |||||||| ||
Sbjct 1485 CTCTAGGGTTATGGTTTTCCCGGTTAAGGTTTTGACGAAGATCTGCATCTT 1535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313961667939299
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |