Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04] 200,203 sequences; 414,621,889 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq187654 84.2 2e-11 >seq187654 Length=7318 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | ||||| || ||||| |||||| Sbjct 4337 TGAGCAATCATGCATGTCAAGAGGGCATAAGATGCAATGTTAAATGGGACACCAAGACCC 4396 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || || | ||| |||| |||||| || | ||||||||| || ||||| ||||| Sbjct 4397 ATGTCAGCAGAGCGCTGATACATTTGGCATGATAACTCCCCGTTGGCGACATAGAACTG 4455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413465487358492