Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq194543 170 5e-37
seq194317 170 5e-37
seq188063 149 1e-30
seq93507 143 6e-29
seq155647 141 2e-28
seq181690 140 8e-28
seq176217 140 8e-28
seq160375 140 8e-28
seq116321 127 5e-24
seq183834 125 2e-23
seq156113 125 2e-23
seq199398 102 2e-16
seq190552 100 7e-16
seq188192 84.2 5e-11
seq162333 84.2 5e-11
>seq194543
Length=10949
Score = 170 bits (188), Expect = 5e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||||||||| || |||| || |||||||| ||||| | |||||||
Sbjct 3465 AGGACTAGGTGAAGAGTGGATTCCTTCTGGATGTTATAATCGGCTAAAGTCCGCCCATCT 3406
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||||||||| || | || || || || || ||||||||||||||
Sbjct 3405 TCCAGTTGCTTTCCAGCGAAGATTAGCCTCTGCTGATCTGGAGGGATACCTTCCTTGTCC 3346
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||| || ||| || ||||| ||||| ||| |||| || || | ||||||||||
Sbjct 3345 TGGATTTTCGCCTTGACGTTGTCGATAGTGTCGGAGCTTTCGACCTCGAGCGTGATCGTC 3286
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| ||||| | ||| | |||||
Sbjct 3285 TTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3254
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| || || || || |||| ||| ||||| || | ||| | |||||||
Sbjct 3921 AGGACAAGGTGGAGGGTTGACTCCTTCTGGATATTATAATCAGCTAGAGTCCGCCCATCT 3862
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||||||||| || || | || ||||| || |||||||| || ||||| ||
Sbjct 3861 TCCAACTGCTTCCCAGCAAAAATCAATCTCTGTTGATCAGGCGGAATCCCCTCCTTATCC 3802
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| || || || || || | ||||| || | || || |||
Sbjct 3801 TGTATCTTAGCCTTCACATTGTCAATTGTATCAGAACTCTCCACCTCCAGAGTAATTGTC 3742
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || |||||||| ||
Sbjct 3741 TTCCCAGTCAAAGTCTT 3725
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| ||||| || | ||||||||||| | || | || ||
Sbjct 3237 AGGACGAGGTGAAGCGTGGACTCTTTCTGTATGTTGTAATCGGCGAGCGTACGGCCGTCC 3178
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||||| ||||| || || || || || || || || |||||||| ||
Sbjct 3177 TCGAGCTGTTTTCCAGCAAAGATTAGACGCTGCTGATCCGGAGGGATTCCTTCCTTATCC 3118
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||||| ||||| || || ||| |||| || || | ||||| |||
Sbjct 3117 TGGATCTTTGCTTTCACGTTGTCGATAGTATCGGAGCTTTCGACCTCGAGGGTGATTGTC 3058
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||||| | ||| | |||||
Sbjct 3057 TTACCAGTTAGGGTTTTCACGAAGATCTGCAT 3026
>seq194317
Length=10706
Score = 170 bits (188), Expect = 5e-37
Identities = 172/224 (77%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| |||||||| |||||||| || |||| ||||| ||||| | ||||
Sbjct 1312 CGAAGGCGGAGGACGAGGTGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGGCTAGAGTT 1371
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| || || || |||||||| || ||||||||||| || |||||||| || || || |||
Sbjct 1372 CTTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCTGGTGGTATGCCT 1431
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|| ||||| ||||||||| || ||| ||||||||||| |||| ||| || ||||
Sbjct 1432 TCTTTGTCCTGGATCTTTGCTTTGACATTGTCGATGGTGTCAGAGGATTCAACCTCTAGG 1491
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || || || || || ||||| | ||| | ||||| ||
Sbjct 1492 GTTATGGTTTTCCCGGTTAAGGTTTTGACGAAGATCTGCATCTT 1535
>seq188063
Length=7454
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||||| |||||||| ||||||| ||||||||||| | || | || ||
Sbjct 525 AGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGCAAGGGTACGACCGTCC 584
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| |||| ||| ||||| || ||||| ||||||||||||
Sbjct 585 TCGAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATCCCTTCCTTGTCT 644
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || |||||||| || ||| ||| | | || | |||||| |||
Sbjct 645 TGGATCTTAGCTTTGACGTTATCGATGGTATCAGAGCTTTTCTCCTCAAGCGTGATGGTC 704
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||||| | ||| | |||||
Sbjct 705 TTGCCGGTTAGGGTTTTCACGAAAATCTGCAT 736
>seq93507
Length=917
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||||| |||||||| ||||||| ||||||||||| | || | || ||
Sbjct 620 AGGACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCGGCAAGGGTACGGCCGTCC 679
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| |||| ||| ||||| || ||||| ||||||||||||
Sbjct 680 TCAAGTTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGGAATCCCTTCCTTGTCT 739
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || |||||||| || ||| ||| | | || | |||||| |||
Sbjct 740 TGGATCTTAGCGTTGACGTTATCGATGGTATCGGAGCTTTTCTCCTCAAGCGTGATGGTC 799
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || | |||||
Sbjct 800 TTGCCGGTTAGGGTTTT 816
>seq155647
Length=3035
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| || ||||| || || || || || |||| ||||| ||||| | || | || ||
Sbjct 2222 CAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTCCGACCGTC 2163
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| ||||| || ||||||||||| || ||||| ||||| || || || |||||||||||
Sbjct 2162 CTCGAGCTGTTTGCCAGCGAAGATGAGGCGTTGCTGGTCCGGTGGGATGCCTTCCTTGTC 2103
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| ||| ||||||||||| |||| ||| || || | || || ||
Sbjct 2102 CTGGATCTTAGCCTTGACATTGTCGATGGTGTCCGAGGATTCAACCTCGAGAGTTATGGT 2043
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||| ||||| | ||||| | ||| | ||||||||
Sbjct 2042 CTTACCCGTTAGGGTTTTGACGAAGATCTGCATTTT 2007
>seq181690
Length=5866
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || ||||||| ||||||||| || | || ||||||||
Sbjct 3434 AGAACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCTAGGGTCCTCCCATCC 3493
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | ||| ||||| || |||||||| | ||| ||||| || ||||| |||||||| |||
Sbjct 3494 TCCAACTGTTTCCCTGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTATCT 3553
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| ||| || || || || ||| ||||||| || | ||||| |||
Sbjct 3554 TGGATCTTTGCCTTGACATTATCAATTGTATCAGAGCTTTCCACCTCAAGGGTGATGGTC 3613
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || || | |||||
Sbjct 3614 TTACCGGTGAGGGTTTT 3630
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | || || |||||||| ||||||| || || || || | || | || ||
Sbjct 2522 AGGACCAAATGAAGGGTGGATTCCTTTTGGATGTTATAGTCAGCGAGGGTACGGCCGTCC 2581
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || ||||| | || || || || ||||||||||| || ||||||
Sbjct 2582 TCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCTGGCGGAATACCCTCTTTGTCT 2641
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| |||||| |||||| || || ||||| ||| | ||||| || || ||||| |||
Sbjct 2642 TGAATCTTTGACTTCACGTTATCAATAGTGTCAGAGTTCTCCACTTCCAAAGTGATGGTC 2701
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 2702 TTCCCTGTCAATGTCTTCACGAAAATCTGCAT 2733
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || || || || || || | ||||| || || |||||
Sbjct 2740 ACGAAGACGAAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCTAAAGT 2799
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || | || ||||| || ||||| | | || || || |||||||||||
Sbjct 2800 CCTTCCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGATCCGGCGGAATACC 2859
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || || ||| ||| || || || |||||||| | ||||| || ||
Sbjct 2860 CTCCTTGTCCTGAATTTTTGCCTTTACGTTGTCAATTGTGTCTGAACTCTCCACCTCCAA 2919
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| ||||| || || | || | ||||||
Sbjct 2920 AGTGATAGTCTTGCCTGTCAAGGTCTTAACAAAGATTTGCAT 2961
>seq176217
Length=4970
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || ||||||| |||||||| || | || ||||||||
Sbjct 2307 AGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAATCCGCTAGGGTCCTCCCATCC 2366
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || || |||||||| ||||| || | || ||||| || ||||| |||||||| |||
Sbjct 2367 TCCAGTTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCTTCCTTATCT 2426
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || || || || || || ||||||| || || ||||| |||
Sbjct 2427 TGGATCTTTGCCTTAACGTTATCAATTGTATCGGAACTTTCCACCTCCAAAGTGATGGTC 2486
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | |||||| | ||| | ||||||
Sbjct 2487 TTCCCGGTGAGAGTTTTCACGAATATTTGCAT 2518
Score = 138 bits (152), Expect = 3e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | ||| || || ||||| || || | ||||| ||||| |||||
Sbjct 2070 CGTAGACGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTC 2129
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|||||||| || | || ||||| || ||||| | | || ||||| ||||| || ||
Sbjct 2130 CTCCCATCCTCCAATTGTTTCCCTGCAAAGATCAACCTCTGCTGGTCTGGCGGGATCCCC 2189
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||||||||| ||||||| ||||||||||| || | || || || ||
Sbjct 2190 TCCTTGTCTTGGATCTTCGCCTTCACATTATCGATGGTGTCCGAACTCTCAACCTCCAAG 2249
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || ||||| || || | ||| | ||||||
Sbjct 2250 GTTATAGTCTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 2290
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
||||| |||||||| ||||||| |||||||||||| | || | || || || || |||
Sbjct 2544 TGGAGGGTGGATTCCTTTTGGATATTGTAATCGGCAAGGGTACGGCCGTCCTCGAGTTGC 2603
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || || || ||||| | ||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 2604 TTGCCGGCAAAAATAAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTA 2663
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
|| || || || ||||| ||| |||| || ||||| ||||| || || || |||
Sbjct 2664 GCTTTGACGTTATCAATTGTGTCAGAGCTTTCGACCTCTAAAGTGATGGTTTTTCCTGTC 2723
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
| || || | ||| | ||||||
Sbjct 2724 AGGGTCTTCACGAATATTTGCAT 2746
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| || || || || ||||||| ||||||||||| | || | |||||
Sbjct 2763 AGGACCAAGTGAAGGGTTGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGGCCATCC 2822
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || || |||||||| | ||| ||||| || ||||| |||||||||||
Sbjct 2823 TCGAGTTGCTTGCCGGCAAAGATAAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCC 2882
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| || || || || ||||| ||| |||| || || || ||||| ||
Sbjct 2883 TGGATCTTAGCTTTGACGTTATCAATAGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTT 2942
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||| ||||| | ||| | |||||
Sbjct 2943 TTTCCTGTCAGGGTTTTCACGAAGATCTGCAT 2974
Score = 102 bits (112), Expect = 2e-16
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| ||||||||||| ||||||| || || ||||| | || | || || || ||||||
Sbjct 1860 TGAAGAGTGGATTCCTTTTGGATGTTATAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGC 1919
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || |||||||| | | || || || || ||||| || ||||| |||||||||||
Sbjct 1920 TTGCCTGCGAAGATCAACCTCTGCTGATCCGGTGGAATCCCCTCCTTATCTTGGATCTTC 1979
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| ||| || || || || || | || || || || || || ||||| || |||
Sbjct 1980 GCCTTGACATTATCAATTGTATCGGAACTCTCAACCTCCAAGGTTATAGTCTTCCCGGTC 2039
Query 225691 AAAGTTTTTATGAACACTTGCATT 225714
|| || || | || | ||||||
Sbjct 2040 AATGTCTTCACAAAAATCTGCATT 2063
>seq160375
Length=3367
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| |||||||| || |||| |||||| || ||||| || | |||||
Sbjct 257 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCCAAGGTACGGCCATCC 316
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || | || || || || || || || ||||| ||
Sbjct 317 TCAAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTATCC 376
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| || |||||||| || | ||||| || || ||||| |||
Sbjct 377 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAACTCTCCACCTCCAAGGTGATTGTC 436
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 437 TTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 468
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| |||||||| || |||| ||||| || ||||| || | |||||
Sbjct 941 AGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCATCC 1000
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || | || ||||| || || ||||| |||||||||
Sbjct 1001 TCGAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCT 1060
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || |||||| || || ||||| ||| | ||||| || || ||||| |||
Sbjct 1061 TGAATTTTCGCCTTCACGTTATCAATAGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTC 1120
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 1121 TTGCCGGTCAAGGTCTT 1137
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||| || || ||||| ||||| || | |||||||| ||||| || | |||||
Sbjct 29 AGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAGGTACGGCCATCC 88
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || | || || || || || || || ||||| ||
Sbjct 89 TCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTATCC 148
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| || || ||||| ||| | || || || || ||||| ||
Sbjct 149 TGGATCTTGGCCTTCACGTTGTCAATTGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTT 208
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||||| | ||| | |||||
Sbjct 209 TTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 240
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || |||||||| || |||| || ||||| ||||| || | ||||||
Sbjct 485 AGCACCAAGTGTAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAAGGTACGGCCATCT 544
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || | || || || || || || || ||||||||
Sbjct 545 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCC 604
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| ||| | || || || || ||||| ||
Sbjct 605 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATGGTT 664
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 665 TTGCCGGTCAAGGTCTT 681
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| |||||||| || || | ||||| || ||||| || | |||||
Sbjct 713 AGCACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTACGGCCATCC 772
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || | || ||||| || || || || ||||||||
Sbjct 773 TCAAGTTGCTTTCCGGCGAAGATGAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 832
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| ||| | || || || || ||||| |||
Sbjct 833 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATTGTC 892
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 893 TTGCCGGTCAAGGTCTT 909
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| || || |||| |||||||| ||||| || | || ||
Sbjct 1169 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCGTCC 1228
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | ||||| |||||||| ||||| | || ||||| || || || || |||||||||
Sbjct 1229 TCCAATTGCTTTCCAGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 1288
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| || || |||||| || |||||||| ||| ||||||| || || ||||| |||
Sbjct 1289 TGAATTTTAGCCTTCACGTTATCAATGGTGTCGGAGCTTTCCACCTCCAAGGTGATGGTC 1348
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || | |||||
Sbjct 1349 TTGCCGGTGAGGGTTTT 1365
>seq116321
Length=1411
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || || || || || || | ||||||||||||||| || | || || || || ||
Sbjct 1066 TGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCCAAGGTCCGACCGTCCTCGAGTTGT 1007
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || |||||||| || | || ||||| || || ||||| |||||||| ||||||||
Sbjct 1006 TTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTA 947
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| || |||||||| |||||| | ||||| || || ||||| ||||| || |||
Sbjct 946 GCCTTGACGTTATCGATGGTATCTGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCGGTC 887
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||| | |||||
Sbjct 886 AAGGTCTTGACGAAGATCTGCAT 864
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|||||||| || || || |||| |||||| ||||| | || | ||||| || |||||
Sbjct 838 TGGAGAGTTGACTCCTTCTGGATATTGTAGTCGGCGAGGGTACGGCCATCCTCGAGCTGT 779
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| || |||||||| || | || ||||| || || || || || |||||||| |||||
Sbjct 778 TTTCCGGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTGTCTTGAATCTTA 719
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
|||||| |||||||||||||| | || || || || || || ||||| || ||
Sbjct 718 GCCTTCACGTTATCGATGGTGTCTGAACTCTCGACCTCCAAGGTAATAGTCTTTCCGGTG 659
Query 225691 AAAGTTTT 225698
| |||||
Sbjct 658 AGGGTTTT 651
>seq183834
Length=6310
Score = 125 bits (138), Expect = 2e-23
Identities = 142/189 (75%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| || | ||| || || ||||| || |||| |||||||| || | | | || ||
Sbjct 854 CAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGCAAGGGGGCGTCCGTC 795
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| || ||||||| ||| | ||| |||||||| ||||| |||||| ||||
Sbjct 794 CTCGAGCTGCTTTCCGGCGAAGACAAGCCTTTGCTGGTCGGGGGGAATCCCTTCCCTGTC 735
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||||| ||| || | ||||||| || ||| |||| | || | ||||||||
Sbjct 734 TTGGATCTTTGCCTTGAC-GTGCCGATGGTTTCGGAGCCTTCCCCCTCAAGGGTGATCGT 676
Query 225681 CTTGCCCGT 225689
|||||| ||
Sbjct 675 CTTGCCAGT 667
>seq156113
Length=3066
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| || || || || |||| || ||||| |||| ||| | |||||||
Sbjct 1325 AGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAATCAGCCAGAGTCCGCCCATCT 1266
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||||||||||| || | | || || || |||||||| || ||||| ||
Sbjct 1265 TCCAATTGCTTCCCAGCGAAAATCAACCTCTGCTGATCAGGCGGAATCCCCTCCTTATCC 1206
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| ||| || || || || ||| | ||||| || | || || |||
Sbjct 1205 TGTATCTTAGCCTTTACATTGTCAATCGTATCAGAGCTCTCCACCTCCAGAGTAATTGTC 1146
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || |||||||| ||
Sbjct 1145 TTCCCAGTCAAAGTCTT 1129
Score = 118 bits (130), Expect = 3e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
||||| || || || | || || || || |||| || ||||| || | |||| ||||
Sbjct 1100 CTCAGCACCAGATGCAACGTCGACTCCTTCTGGATGTTATAATCCGCTAGGGTTCGCCCA 1041
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
||||| | ||||| |||||||| || | || || || || || ||||| |||||||||
Sbjct 1040 TCTTCCAATTGCTTACCAGCGAAAATCAACCGCTGCTGATCCGGAGGAATCCCTTCCTTG 981
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
|||||||| || ||| ||| ||||| || || ||| | || || || || |||||
Sbjct 980 TCTTGGATTTTGGCCTTTACATTGTCGATAGTATCGGAGCTCTCGACTTCCAAGGTGATT 921
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| || | ||||| | ||| | |||||
Sbjct 920 GTTTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 886
>seq199398
Length=3331
Score = 102 bits (112), Expect = 2e-16
Identities = 65/71 (92%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 1265 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 1206
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 1205 GAGTCTGACAC 1195
>seq190552
Length=8361
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 8223 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 8282
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 8283 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 8342
Query 7855 GTTAGCT 7861
|||||||
Sbjct 8343 GTTAGCT 8349
>seq188192
Length=7493
Score = 84.2 bits (92), Expect = 5e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
|||||||| || || || || || || || || |||| ||||| || || | |||||
Sbjct 4798 AAGTCTCAAAACCAGATGAAGTGTTGACTCCTTCTGGATGTTGTAGTCTGCTAGAGTTCG 4857
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| | || || ||||| || || | || ||||| || ||||| ||||||||
Sbjct 4858 GCCATCTTCCAATTGTTTGCCAGCAAAAATCAATCTCTGTTGATCCGGCGGGATACCTTC 4917
Query 225615 CTTGTCTTG 225623
|||||| ||
Sbjct 4918 CTTGTCCTG 4926
>seq162333
Length=3517
Score = 84.2 bits (92), Expect = 5e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| || ||||| || ||||||| ||||| || || | ||| | |||||||||| ||
Sbjct 3131 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTCCGACCATCTTCTAATTGT 3072
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624
|| |||||||| || | || ||||| || || ||||| ||||||||||| |||
Sbjct 3071 TTGCCAGCGAAAATCAATCTCTGTTGATCAGGTGGAATGCCTTCCTTGTCCTGG 3018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1189472237100882
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |