Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq22702 158 9e-34 seq22701 156 3e-33 seq52987 102 6e-17 >seq22702 Length=2386 Score = 158 bits (174), Expect = 9e-34 Identities = 374/562 (67%), Gaps = 10/562 (2%) Strand=Plus/Plus Query 101708 TGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATC 101767 || ||||| || | | ||||||||| || || || || || | | | |||||||||| Sbjct 639 TGTGCATCCCCAAGAACATGGATAAAATCACCTGGAACAAGTTCACAAATATGAGCAATC 698 Query 101768 ATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCT 101827 ||||| || | || | ||| |||||||| |||||||| || | ||||||||||| Sbjct 699 ATGCATGTCAGGAGGGCATAAGATGCAATGTTGAATGGCACACCCAGGCCCATATCAGCA 758 Query 101828 GATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACA 101887 |||| |||| || |||||| || | || |||| ||||| || || | | Sbjct 759 GATCGCTGATTCATTTGACACGATAACTCCCCATTTGCTACATAGAACTGCGCAGACATG 818 Query 101888 TGACAAGGCGGCAACACCAT---TTTAGGAATGTCTGAAACATTCCAAGCACACATTAAC 101944 ||||| || || | |||| |||| || |||| |||||| ||| | | | Sbjct 819 TGACAGGGTGGAAGTGCCATCAATTTAAGA---TCTGCTGGATTCCATGCAGAGAGAATG 875 Query 101945 ATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACT 102004 |||| |||||| ||| || ||||| | | || | | | | || |||||| Sbjct 876 ATCCGTCTATCATCAGGATTATGCTTTATCTTGTTGATAACATCTAAAAGCTGATCAACT 935 Query 102005 CCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCT--GCTCCGAAATGCCTCCACT 102062 |||| || |||| || || ||| ||| | || || || |||||||||| Sbjct 936 CCTTGGCCAGTATAGTCATTATG--CATGTTTGTATACCTGGCACCAAAGTGCCTCCACT 993 Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122 |||| ||||| |||||||| | || || || || || || | ||| ||| |||| | Sbjct 994 GAAACCCATAAACAGGTCCTAAGTCACCCTCCTCCCTCTCTGACAAATCAATGCTATCAA 1053 Query 102123 AAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGC 102182 ||| |||||| |||| | ||||| || || | ||| | | || | | || Sbjct 1054 GGAATTCCCTAGATGCATTATCGTCCCATATATGAATGCCTTTTTCCTGTAACACCATGG 1113 Query 102183 TGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTC 102242 | || || || ||||||||||| | || ||||||||||| || | ||||||||||| Sbjct 1114 CATTTGTTGAGCCACTGATAAACCAAAGAAGCTCTTCAACAACCCCGCGCCAAAATACTC 1173 Query 102243 TCTTAGTAGTTAAAAGTGGAAA 102264 ||||||| |||| ||| ||||| Sbjct 1174 TCTTAGTTGTTAGAAGCGGAAA 1195 >seq22701 Length=2303 Score = 156 bits (172), Expect = 3e-33 Identities = 374/559 (67%), Gaps = 14/559 (3%) Strand=Plus/Plus Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| || ||| ||||||||| || || || || || | | ||||||||||||||||| Sbjct 561 ATCCCCAATAACATGGATAAAATCACCTGGAACAAGGTCACAAACATGAGCAATCATGCA 620 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 || || || | ||| ||||| ||||| ||||| || | ||||| || || |||| Sbjct 621 TGTCAAGAGCGCATAAGATGCAATATTAAACGGCACACCCAGGCCCATGTCGGCAGATCG 680 Query 101833 TTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACA 101892 |||||||| |||||| || | || |||| ||||| || || || | || || Sbjct 681 TTGATACATTTGACACGATAACTCCCCATTTGCCACATAGAACTGTGCAAACATGTGGCA 740 Query 101893 AGGCGGCAACACCATT---TTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCT 101949 || || | ||||| ||| || || || |||||| || | | | || | Sbjct 741 TGGTGGAAGAGCCATTAATTTAAGA---TCAGATGGATTCCATGCTGAGAGGATGATGCG 797 Query 101950 TCTATCTGTAGGGTTTGTT-TTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTT 102008 || ||| | ||| || | ||||| ||| ||| | | | | || |||| ||||| Sbjct 798 TCGATCA-TCGGGATTATGCTTTATCTTATTAATAACATCTAAAAGCTGATCAAATCCTT 856 Query 102009 CTCCTTTATAATCGCGCCCAA-CACCTT--TATATTCTGCTCCGAAATGCCTCCACTGAA 102065 || || || | || || || |||| | ||| || || ||||||||||||| Sbjct 857 GGCCGGAGTAGTC---CTCATGCATGTTAGTATACTTTGCACCAAAGTGCCTCCACTGAA 913 Query 102066 ATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAA 102125 | ||||| |||||||| | || || || || || || | ||||||| |||| | Sbjct 914 ACCCATAAACAGGTCCTAAGTCACCCTCCTCCCTTTCTTTCAAACCAATGCTATCAAGGT 973 Query 102126 ATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGT 102185 || ||| ||| |||| | ||||| || || | ||| | | || | | || | Sbjct 974 ATTCTCTCGATGCATTTCCGTCCCATATATGAATGCCTTTTTCCTGTAACACCATGGCAT 1033 Query 102186 CAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCT 102245 || || || ||||||||||| | || ||||||||||| || | |||||||||||||| Sbjct 1034 TTGTTGAGCCACTGATAAACCAAAGAAGCTCTTCAACAACCCCGCGCCAAAATACTCTCT 1093 Query 102246 TAGTAGTTAAAAGTGGAAA 102264 |||| |||| ||| ||||| Sbjct 1094 TAGTTGTTAGAAGCGGAAA 1112 >seq52987 Length=440 Score = 102 bits (112), Expect = 6e-17 Identities = 110/143 (77%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 102191 GATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTA 102250 || || ||||||||||| | |||||||||||||| |||| |||||||||| ||||||| Sbjct 2 GAGCCACTGATAAACCAAAGAAGTTCTTCAACAACCCCTCGCCAAAATACTTTCTTAGTT 61 Query 102251 GTTAAAAGTGGAAATTCATTTTC-TAAACTAAACCTAGACTGTGTTCCAAAAATACTCAG 102309 |||||||||||||| | ||||| | | |||| || || | ||||| || || Sbjct 62 GTTAAAAGTGGAAA-GCTTTTTCGCAGATTAAATCTCATCTTGGAACCAAATATGGACAA 120 Query 102310 TGTTCCAGTCCCTGTTCTGTCAT 102332 || ||||||||||| || |||| Sbjct 121 GGTACCAGTCCCTGTCCTATCAT 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360922495162409