Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2805 104 2e-17 seq2799 98.7 8e-16 seq2801 95.1 1e-14 seq33732 91.5 1e-13 seq34025 89.7 4e-13 seq56145 87.8 2e-12 seq56144 87.8 2e-12 seq56143 87.8 2e-12 seq2804 86.0 5e-12 >seq2805 Length=580 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| | || || | || ||||| ||||| || |||| || Sbjct 254 AAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGT 313 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 |||| || | | | || ||||| || ||| || || ||||| | || ||| Sbjct 314 TCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGAT 373 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||| || || |||||||| |||||||| || |||||| || |||| ||||||||||| Sbjct 374 CAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 433 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||| ||||| || || || | ||||| ||| | || || || Sbjct 434 AACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 483 >seq2799 Length=391 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || ||||| ||| | || ||||| || || ||||||||||| || ||||| || ||| Sbjct 161 GACAAAGAGGGTATCCCACCGGATCAGCAGAGGCTTATCTTTGCTGGAAAACAGCTCGAA 220 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| |||||||||| ||||||||||||||||| || ||||| | || || Sbjct 221 GATGGCCGAACTCTGGCCGATTATAATATTCAGAAGGAATCCACCCTTCATCTTGTCCTA 280 Query 29175 CGATTACGAGGAGG 29188 || || | ||||| Sbjct 281 CGTTTGAGGGGAGG 294 >seq2801 Length=469 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| || | ||||||||||| |||||||| || || || ||| Sbjct 70 AAGATGCAAATCTTTGTGAAAACATTGACCGGCAAAACTATCACTCTTGAGGTGGAGAGT 129 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | | | || ||||| ||||| |||||| | || ||| Sbjct 130 TCTGATACCATAGACAACGTGAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 189 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || ||||| ||||||||||| || |||||| |||||||| || | || |||||| Sbjct 190 CAGCAAAGGCTTATCTTTGCTGGGAAACAATTGGAAGATGGTCGCACCCTTGCTGATTAC 249 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||||||||| ||||||||| | || | ||||| |||| || Sbjct 250 AACATCCAGAAGGAATCCACTCTTCACCTTGTACTCCGATTGAGAGGTGG 299 >seq33732 Length=802 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || ||||| || || |||||||| |||||||| || |||||| || |||| |||||||| Sbjct 593 GACCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGAT 652 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| || ||||| ||||| || || || | ||||| ||| | || || || Sbjct 653 TACAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 705 >seq34025 Length=456 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| || || ||||||||| || ||| || Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| |||||| || || || || | || |||||| Sbjct 193 GACACCATTGATAACGTGAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATCAG 252 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| |||||||| || |||||| || |||| ||||||||||||| Sbjct 253 CAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 312 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| ||||| || || || | ||||| ||| | || || || Sbjct 313 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 359 >seq56145 Length=1576 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || |||||||| | ||||||||||| || |||||||| ||| Sbjct 657 GATAAGGAAGGGATACCACCTGATCAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAA 598 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| ||| | || ||||| |||||||||||||||||||| |||||| Sbjct 597 GATGGACGCACTCTTGCTGATTATAATATTCAGAAGGAATCTACACTTCAC 547 >seq56144 Length=1637 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || |||||||| | ||||||||||| || |||||||| ||| Sbjct 657 GATAAGGAAGGGATACCACCTGATCAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAA 598 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| ||| | || ||||| |||||||||||||||||||| |||||| Sbjct 597 GATGGACGCACTCTTGCTGATTATAATATTCAGAAGGAATCTACACTTCAC 547 >seq56143 Length=1408 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || |||||||| | ||||||||||| || |||||||| ||| Sbjct 657 GATAAGGAAGGGATACCACCTGATCAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAA 598 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| ||| | || ||||| |||||||||||||||||||| |||||| Sbjct 597 GATGGACGCACTCTTGCTGATTATAATATTCAGAAGGAATCTACACTTCAC 547 >seq2804 Length=712 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||| || | || || ||||| || ||||||||||| |||||||| || || Sbjct 578 GATAAAGAGGGCATTCCACCCGACCAACAGAGGCTTATCTTTGCTGGCAAACAGCTTGAG 637 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || |||| | || |||||||| |||||||| || || ||||| || | ||||| Sbjct 638 GATGGCAGAACTTTAGCAGATTACAACATTCAGAAAGAGTCAACTCTCCATCTTGTGTTG 697 Query 29175 CG 29176 || Sbjct 698 CG 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427946254262645