Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq48696 134 1e-26 seq53415 129 6e-25 seq56144 114 1e-20 seq33732 104 2e-17 seq2804 104 2e-17 seq2805 100 3e-16 seq56143 98.7 1e-15 seq48430 95.1 1e-14 seq34025 95.1 1e-14 seq56145 93.3 4e-14 seq2799 89.7 5e-13 >seq48696 Length=1151 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||||||||| ||||| ||||| || || |||||||| |||| ||||| Sbjct 74 AAGATGCAAATATTCGTTAAAACCCTCACCGGAAAGACCATCACTCTCGAGGTCGAGAGT 133 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| |||||| || || | ||||| || || || ||| | || Sbjct 134 TCTGACACCATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCTGA 192 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||||| || |||| ||| || |||||||| || |||| || || || ||||| Sbjct 193 CCAGCAACGTCTGATCTTCGCCGGAAAACAGCTTGAGGACGGTCGTACTCTTGCTGACTA 252 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| | || || ||||| || Sbjct 253 CAACATCCAGAAGGAATCAACCCTTCATCTTGT 285 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || |||||||| || |||||||||||| |||| || || | Sbjct 305 ATGCAGATCTTTGTTAAGACGCTCACCGGGAAAACCATCACCCTCGAGGTTGAGAGTTCT 364 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || || | || || || || ||||| |||| || Sbjct 365 GATACCATCGACAACG-TGAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCA 423 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||||| || |||||||| |||| | || || || ||||| Sbjct 424 GCAGAGGTTGATCTTTGCGGGTAAGCAGCTGGAAGACGGAAGGACTCTTGCTGATTACAA 483 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || || || || ||| |||| ||||||| ||| Sbjct 484 TATCCAGAAGGAGTCGACCCTTCACCTTGTGCTGCGTCTGAGGGGTGGC 532 >seq53415 Length=940 Score = 129 bits (142), Expect = 6e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| ||||| || ||||| || || || ||| |||| || || | Sbjct 152 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTTGAGTCT 211 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| ||||| || || | || Sbjct 212 TCCGACACCATCGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGGATTCCTCCAGA 270 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||| || ||||||| ||| || || ||| |||| |||| ||||| ||| |||||| Sbjct 271 TCAGCAGCGTCTCATCTTCGCCGGGAAGCAGTTGGAAGACGGCCGCACTCTCGCCGACTA 330 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | || || ||||| || Sbjct 331 CAACATCCAGAAGGAGTCAACTCTCCATCTCGT 363 >seq56144 Length=1637 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || |||||||| ||| | || || ||| || || Sbjct 1206 ATGCAAATCTTTGTGAAAACCCTAACCGGTAAAACCATAACCCTAGAGGTTGAATCCTCC 1147 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || |||| ||||| ||||| || || | || || Sbjct 1146 GACACCATCGACAACG-TGAAAGCTAAGATTCAAGACAAGGAGGGAATTCCTCCCGATCA 1088 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || |||||| |||| |||| || ||||| ||||||||| Sbjct 1087 GCAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGACGGCCGAACCCTAGCCGACTACAA 1028 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| |||||||| | ||||| || || || Sbjct 1027 CATACAGAAGGAATCAACGCTCCACCTGGT 998 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || ||||||||||| | || || ||| || | Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | |||||||| || || || |||| || Sbjct 918 GACACAATCGACAACG-TGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCA 860 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||||| || || ||||| |||| | | || || || || || Sbjct 859 ACAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAA 800 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| | || || ||| | || | ||| || | || || Sbjct 799 TATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 >seq33732 Length=802 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| || || || || ||||| || | || || || | Sbjct 479 ATGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCA 538 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | |||||||||||||| || ||||||| Sbjct 539 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACCAA 598 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||||||||| || || | | || | ||| |||||| Sbjct 599 CAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 658 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| || |||| || ||||| |||||||| Sbjct 659 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 693 >seq2804 Length=712 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| || || ||||||||| | || ||||| | | Sbjct 485 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 544 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| | || |||| || ||||||||||| || | ||||| Sbjct 545 GATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCAA 604 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACAA 40868 || | || |||| || ||||||||||| || || | || | | | | | || ||||| Sbjct 605 CAGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATG-GCAGAACTTTAGCAGATTACAA 663 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||| ||| | || || ||||| |||||||| Sbjct 664 CATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCG 699 >seq2805 Length=580 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| || || ||||| ||||| |||||||| |||| || || Sbjct 254 AAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGT 313 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | | | | | |||| || |||| ||||| || || ||||| | || Sbjct 314 TCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGAT 373 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || | ||||||| || ||||||||||| || || | | || | ||| ||| Sbjct 374 CAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 433 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||| || |||| || ||||| |||||||| Sbjct 434 AACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 471 >seq56143 Length=1408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| |||||||| || || ||||||||||| | || || ||| || | Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | |||||||| || || || |||| || Sbjct 918 GACACAATCGACAACG-TGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCA 860 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||||| || || ||||| |||| | | || || || || || Sbjct 859 ACAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAA 800 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| | || || ||| | || | ||| || | || || Sbjct 799 TATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 >seq48430 Length=787 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 40717 GGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAA 40776 || |||||||||||| |||| ||||| || ||||| | | | | ||||| || Sbjct 2 GGGAAAACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGACCAAG 61 Query 40777 ATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAG 40836 |||| |||||||| || ||||| |||| ||||| || | || | ||| || || ||| Sbjct 62 ATTCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAAGCAG 121 Query 40837 CTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTA 40896 || || || | |||||| | ||| ||||| ||||||||||| | || || ||||| Sbjct 122 CTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCATCTT 181 Query 40897 GT 40898 || Sbjct 182 GT 183 >seq34025 Length=456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || ||||| ||| | || || ||| | Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| |||||| | ||||| ||||| ||||| | || || Sbjct 193 GACACCATTGATAACG-TGAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATCA 251 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| || ||||||||||| || || | | || | ||| ||||| Sbjct 252 GCAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAA 311 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| || |||| || ||||| |||||||| Sbjct 312 CATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 347 >seq56145 Length=1576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || || ||||||||||| | || || ||| || | Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | |||||||| || || || |||| || Sbjct 918 GACACAATCGACAACG-TGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCA 860 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||||| || || ||||| |||| | | || || || || || Sbjct 859 ACAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAA 800 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| | || || ||| | || | ||| || | || || Sbjct 799 TATCCAGAAAGAGTCTACTCTCCATTTGGTTCTTCGCCTGCGTGGAGG 752 >seq2799 Length=391 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || || || ||||||||| | || || || | Sbjct 68 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATCACCCTTGAGGTTGAGAGTTCT 127 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||||||||| ||||| |||| ||| Sbjct 128 GACACAATTGACAATGTGAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCGGATCAG 187 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || |||||||| || || | || || || ||| || || Sbjct 188 CAGAGGCTTATCTTTGCTGGAAAACAGCTCGAAGATGGCCGAACTCTGGCCGATTATAAT 247 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||||||| |||| || ||||| || | || |||||||| || Sbjct 248 ATTCAGAAGGAATCCACCCTTCATCTTGTCCTACGTTTGAGGGGAGG 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514738378121840