Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq22702 179 3e-40 seq22701 174 1e-38 >seq22702 Length=2386 Score = 179 bits (198), Expect = 3e-40 Identities = 344/502 (69%), Gaps = 4/502 (1%) Strand=Plus/Minus Query 20054 TAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAG 20113 |||| || || | ||||||||| || |||||||||||| | | |||||||| | | Sbjct 1185 TAACAACTAAGAGAGTATTTTGGCGCGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTG 1126 Query 20114 GATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGAT 20173 | ||||||||| | | | | | |||||||| || | || ||| || ||| || Sbjct 1125 GCTCAACAAATGCCATGGTGTTACAGGAAAAAGGCATTCATATATGGGACGATAATGCAT 1066 Query 20174 CTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCT 20232 ||| | |||| | | |||| || ||||| || | | | ||||| || || || ||| Sbjct 1065 CTAGGGAATTCCTTGATAGCATTG-ATTTGTCAGAGAGGGAGGAGGGTGACTTAGGACCT 1007 Query 20233 GTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTAT 20292 || ||||| ||||| ||||| || ||||| || ||| ||||| | | | ||| Sbjct 1006 GTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACAAACATGCATAATGACTAT 947 Query 20293 TTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAAC 20352 ||| |||||||| ||||| | | ||||||| || || || || || | Sbjct 946 ACTGGCCAAGGAGTTGATCAGCTTTTAGATGTTATCAACAAGATAAAGCATAATCCTGAT 887 Query 20353 GACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCT 20412 || ||| | || ||| | | || ||||| | |||| | || ||||| | || Sbjct 886 GATAGACGGATCATTCTCTCTGCATGGAATCCAGCAGATCTTAAATTGATGGCACTTCCA 827 Query 20413 CCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTA 20471 || ||||| ||| | ||| || || || || || ||| || || |||||||||||| | Sbjct 826 CCCTGTCACATG-TCTGCGCAGTTCTATGTAGCAAATGGGGAGTTATCGTGTCAAATGAA 768 Query 20472 TCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCT 20531 ||| ||||| ||||||||||| |||||||| || ||||| |||||| |||||| || || Sbjct 767 TCAGCGATCTGCTGATATGGGCCTGGGTGTGCCATTCAACATTGCATCTTATGCCCTCCT 708 Query 20532 TACGTATATGATTGCACATGTT 20553 || | |||||||| ||| || Sbjct 707 GACATGCATGATTGCTCATATT 686 >seq22701 Length=2303 Score = 174 bits (192), Expect = 1e-38 Identities = 343/502 (68%), Gaps = 4/502 (1%) Strand=Plus/Minus Query 20054 TAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAG 20113 |||| || || | ||||||||| || |||||||||||| | | |||||||| | | Sbjct 1102 TAACAACTAAGAGAGTATTTTGGCGCGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTG 1043 Query 20114 GATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGAT 20173 | ||||||||| | | | | | |||||||| || | || ||| || | ||| || Sbjct 1042 GCTCAACAAATGCCATGGTGTTACAGGAAAAAGGCATTCATATATGGGACGGAAATGCAT 983 Query 20174 CTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCT 20232 | | ||| | | |||| ||| ||||| | | | | ||||| || || || ||| Sbjct 982 CGAGAGAATACCTTGATAGCATTGG-TTTGAAAGAAAGGGAGGAGGGTGACTTAGGACCT 924 Query 20233 GTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTAT 20292 || ||||| ||||| ||||| || ||||| || | ||| | ||||| | | || Sbjct 923 GTTTATGGGTTTCAGTGGAGGCACTTTGGTGCAAAGTATACTAACATGCATGAGGACTAC 864 Query 20293 TTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAAC 20352 | || |||||| | ||||| | | ||||||||||| || || || || | Sbjct 863 TCCGGCCAAGGATTTGATCAGCTTTTAGATGTTATTAATAAGATAAAGCATAATCCCGAT 804 Query 20353 GACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCT 20412 || || | || || | | || ||||| | ||| | ||||||||| | || Sbjct 803 GATCGACGCATCATCCTCTCAGCATGGAATCCATCTGATCTTAAATTAATGGCTCTTCCA 744 Query 20413 CCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTA 20471 ||||| || ||| | ||| || || || || || ||| || || |||||||||||||| Sbjct 743 CCATGCCACATGTT-TGCACAGTTCTATGTGGCAAATGGGGAGTTATCGTGTCAAATGTA 685 Query 20472 TCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCT 20531 ||||||||| || || ||||| |||||||| || || ||||||||| ||||||||| | Sbjct 684 TCAACGATCTGCCGACATGGGCCTGGGTGTGCCGTTTAATATTGCATCTTATGCGCTCTT 625 Query 20532 TACGTATATGATTGCACATGTT 20553 || | |||||||| |||||| Sbjct 624 GACATGCATGATTGCTCATGTT 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398820779858755