Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq56144 111 1e-19 seq53415 96.9 3e-15 seq2801 96.9 3e-15 seq56145 91.5 1e-13 seq34025 89.7 4e-13 seq33732 87.8 1e-12 seq48696 86.0 5e-12 seq2799 82.4 6e-11 >seq56144 Length=1637 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||| ||| ||||| |||||||| |||||||||||| || || |||| || Sbjct 997 TACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTC 1056 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || ||||||||||| || ||||||||||| || |||||||| | ||||||||||| Sbjct 1057 CAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTGTCTTG 1116 Query 45247 AATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 || | || |||| || | | | | |||| || ||||| | ||| || || | Sbjct 1117 AA-TCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATGGTTT 1175 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 | || || || || |||||||||||||||||| || Sbjct 1176 TACCGGTTAGGGTTTTCACAAAGATTTGCATGATG 1210 >seq53415 Length=940 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| |||| |||| || || |||||||| Sbjct 346 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAA 287 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| || || ||||| | ||||||||||| || || ||| || Sbjct 286 GATGAGACGCTGCTGATCTGGAGGAATCCCCTCCTTGTCTTGGATCTTGGTCTTGACGTT 227 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||| ||||| | ||| |||||||| ||||| || || ||||| Sbjct 226 GTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCAC 167 Query 45325 AAAGATTTGCATGTTG 45340 ||||| ||||| ||| Sbjct 166 GAAGATCTGCATCTTG 151 >seq2801 Length=469 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||| | ||| | ||| || ||| |||||||| |||||||| || Sbjct 299 CCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 240 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || |||| |||||| || || || || | || || || || ||||| Sbjct 239 AGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGA 180 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||| ||||| || ||||| || || | | | | || || ||||||| Sbjct 179 ATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCACC 120 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || | || || || ||||| |||| || ||||||||||||||||| ||| Sbjct 119 TCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCATCTTG 69 >seq56145 Length=1576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||| ||| ||||| |||||||| |||||||||||| || || |||| || Sbjct 997 TACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTC 1056 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || ||||||||||| || ||||||||||| || |||||||| | ||||||||| Sbjct 1057 CAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTG 1111 >seq34025 Length=456 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCA--GTTG-GCGATCGTCGTCCAGTTGTTTTCCGGCG 45202 || ||||| |||||||| ||| || ||| || ||| ||| || ||||| || || Sbjct 323 TCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATCTTCG---AGCTGTTTGCCAGCA 267 Query 45203 AATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACC 45262 || ||||||| ||| || || || || | ||||||||||| |||||| ||| || Sbjct 266 AAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGTATTTTTGCCTTCACG 207 Query 45263 GCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTC 45322 | | | |||| || || ||||| | |||||| ||||| || |||| ||||||| Sbjct 206 TTATCAATGGTGTCTGAACTTTCTACCTCTAAGGTAATGGTCTTTCCGGTCAAAGTCTTC 147 Query 45323 ACAAAGATTTGCAT 45336 || ||||| ||||| Sbjct 146 ACGAAGATCTGCAT 133 >seq33732 Length=802 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 || || || || ||| |||||||| |||||||| || || || | || || Sbjct 459 ACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCT 400 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || || || || | ||||| || || ||||| | ||||||||||| | Sbjct 399 AGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGA 340 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | | || || ||| || || | || || |||||| Sbjct 339 ATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTG 280 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| |||||||||||||||||||| ||| Sbjct 279 CCAGTCAGGGTCTTCACAAAGATTTGCATCTTG 247 >seq48696 Length=1151 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| || ||| |||| || || |||||||||||||| Sbjct 267 TCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGCTGTTTTCCGGCGAAG 208 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || || ||||| || || | || ||||||||| || || ||| || Sbjct 207 ATCAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTG 148 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| || ||| ||||| | || || ||||| || || || || || || Sbjct 147 TCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTAACG 88 Query 45326 AAGATTTGCATGTTG 45340 || |||||||| ||| Sbjct 87 AATATTTGCATCTTG 73 >seq2799 Length=391 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || ||||| | || || | || || ||| ||||||||||| || || ||| | Sbjct 294 CCTCCCCTCAAACGTAGGACAAGATGAAGGGTGGATTCCTTCTGAATATTATAATCGGCC 235 Query 45170 AG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || | ||| ||| ||| || |||||||| || || || | || ||| || || || Sbjct 234 AGAGTTCGGCCATCTTCG---AGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGT 178 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | |||||| ||||| || || ||| || | | |||| || ||| Sbjct 177 GGGATACCCTCTTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCAGAACTCTCA 118 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| | ||| || ||||| || ||||||||||||||||| || ||||| Sbjct 117 ACCTCAAGGGTGATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394715718482839