Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2801 109 4e-19 seq2804 91.5 1e-13 >seq2801 Length=469 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | |||||| || ||||| || || |||||||| || || | || || |||| Sbjct 284 AGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCT 225 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||||||||| || ||| ||||||| ||||| ||||| || | ||||||||||| Sbjct 224 TCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCTTCCTTATCT 165 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| || || | | | || ||| ||| |||| ||||| || Sbjct 164 TGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCACCTCAAGAGTGATAGTT 105 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331 ||||||||||||||||| ||||| |||||||| || || Sbjct 104 TTGCCGGTCAATGTTTTCACAAAGATTTGCATCTTGAA 67 >seq2804 Length=712 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || ||||| ||||| ||||||||||| || || | ||| | | ||| || | ||| Sbjct 687 TGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAAAGTTCTGCCATCCTCAAGCTGT 628 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 ||||| ||| ||||||| || ||||| || || | ||| || ||||| ||| | | Sbjct 627 TTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCCTGAATCT-T 569 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || ||||| | ||| || ||| | |||| |||| ||||||| | || || || Sbjct 568 GGCTTTGACATTGTCAATGGTATCAGAGCTCTCGACCTCAAGGGTGATGGTCTTTCCAGT 509 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 | ||||| ||||| |||||||| Sbjct 508 GAGAGTTTTCACAAAGATTTGCAT 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378998832404955