Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq22702 161 2e-34 seq22701 143 5e-29 >seq22702 Length=2386 Score = 161 bits (178), Expect = 2e-34 Identities = 379/564 (67%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCG- 35211 |||||||| || || || || | || | ||||| ||| ||||||||| ||| || Sbjct 1261 GATAGAACAGGGACTGGGACCTTGTCAAAATTTGGTTGCCAGATGAGGTTCAATCTGCGC 1202 Query 35212 AGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGA 35271 ||| | || |||| |||| || || |||| | | || ||| | || ||||| ||||| Sbjct 1201 AGAGG---CT-TTCCGCTTCTAACAACTAAGAGAGTATTTTGGCGCGGGGTTGTTGAAGA 1146 Query 35272 ACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAG--ATA 35329 || ||||| ||||| ||| ||| | |||| | || || ||| ||| || Sbjct 1145 GCTTCTTTGGTTTATCAGTGGCTCAACAAATGCCATGGTGTTA--CAGGAAAAAGGCATT 1088 Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389 || || ||| ||| ||||| || ||||||| | || || | | || | || || Sbjct 1087 CATATATGGGACGATAATGCATCTAGGGAATTCCTTGATAGCATTGATTTGTCAGAGAGG 1028 Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT 35449 | ||||| || || ||||| || || || || || ||| | || |||||||| ||| Sbjct 1027 GAGGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTAT 968 Query 35450 G-ATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAA 35508 | || || | || |||||||| | || ||||||| | || | | || Sbjct 967 ACAAACATGCA-TAATGACTATACTGGCCAAGGAGTTGATCAGCTTTTAGATGTTATCAA 909 Query 35509 GACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGA 35568 | | | | ||||| ||||||||| |||| ||| | | ||||||||||| || Sbjct 908 CAAGATAAAGCATAATCCTGATGATAGACGGATCATTCTCTCTGCATGGAATCCAGCAGA 849 Query 35569 TCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGG 35628 |||| | | ||||| ||||| || || |||||| |||| || || ||||| || ||||| Sbjct 848 TCTTAAATTGATGGCACTTCCACCCTGTCACATGTCTGCGCAGTTCTATGTAGCAAATGG 789 Query 35629 AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAA 35688 || || ||||| || || |||||||| | ||| | || |||| ||||| ||||| Sbjct 788 GGAGTTATCGTGTCAAATGAATCAGCGATCTGCTGATATGGGCCTGGGTGTGCCATTCAA 729 Query 35689 TATTGCATCATACTCTCTTCTGAC 35712 |||||||| || | || ||||| Sbjct 728 CATTGCATCTTATGCCCTCCTGAC 705 >seq22701 Length=2303 Score = 143 bits (158), Expect = 5e-29 Identities = 368/553 (67%), Gaps = 13/553 (2%) Strand=Plus/Minus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCG- 35211 |||||||| || || || || | || | ||||| ||| ||||||||| ||| || Sbjct 1178 GATAGAACAGGGACTGGGACCTTGTCAAAATTTGGTTGCCAGATGAGGTTCAATCTGCGC 1119 Query 35212 AGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGA 35271 ||| | || |||| |||| || || |||| | | || ||| | || ||||| ||||| Sbjct 1118 AGAGG---CT-TTCCGCTTCTAACAACTAAGAGAGTATTTTGGCGCGGGGTTGTTGAAGA 1063 Query 35272 ACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAG--ATA 35329 || ||||| ||||| ||| ||| | |||| | || || ||| ||| || Sbjct 1062 GCTTCTTTGGTTTATCAGTGGCTCAACAAATGCCATGGTGTTA--CAGGAAAAAGGCATT 1005 Query 35330 CACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGA 35389 || || ||| ||| |||| ||| | |||| | || || | || || | || || Sbjct 1004 CATATATGGGACGGAAATGCATCGAGAGAATACCTTGATAGCATTGGTTTGAAAGAAAGG 945 Query 35390 GCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT 35449 | ||||| || || ||||| || || || || || ||| | || |||||||| | ||| Sbjct 944 GAGGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCAAAGTAT 885 Query 35450 GATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAG 35509 || | | || || | || | || ||||||| | || | | || Sbjct 884 ACTAACATGCATGAGGACTACTCCGGCCAAGGATTTGATCAGCTTTTAGATGTTATTAAT 825 Query 35510 ACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGAT 35569 | | | | ||||| |||||| || | || || | | ||||||||||| ||| Sbjct 824 AAGATAAAGCATAATCCCGATGATCGACGCATCATCCTCTCAGCATGGAATCCATCTGAT 765 Query 35570 CTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGA 35629 ||| | | ||||||||||| |||||||||||| ||| || || |||||||| ||||| Sbjct 764 CTTAAATTAATGGCTCTTCCACCATGCCACATGTTTGCACAGTTCTATGTGGCAAATGGG 705 Query 35630 GAATTGTCGTGCCAGTTGTATCAGCGAA--GCGGAGATGTCGGGTTGGGCGTGCCCTTCA 35687 || || ||||| || ||||||| ||| || || ||| || |||| ||||| || | Sbjct 704 GAGTTATCGTGTCAAATGTATCAACGATCTGCCGACATG--GGCCTGGGTGTGCCGTTTA 647 Query 35688 ATATTGCATCATA 35700 |||||||||| || Sbjct 646 ATATTGCATCTTA 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988637395179345