Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq34025 93.3 4e-14 seq56145 91.5 1e-13 seq56144 91.5 1e-13 seq56143 91.5 1e-13 seq2801 89.7 5e-13 seq2799 87.8 2e-12 seq33732 84.2 2e-11 >seq34025 Length=456 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || || ||||| || ||||| |||||| || || || Sbjct 347 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCA 288 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||||||||| |||||| |||||| | |||||||| || || || || || ||| Sbjct 287 TCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 228 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || |||||| || | | || | ||||| | || ||||| | ||| | Sbjct 227 TCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACCTCTAAGGTAATG 168 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||||| |||||||| || || ||||| || |||||| || Sbjct 167 GTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCATACCT 129 >seq56145 Length=1576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| || || | ||||||||||| || || |||||||| | || ||| ||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || || || || ||| |||||| || || ||||| ||||| || ||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | |||||| | || || ||||| | || | || || Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||||| ||||| |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTT 139613 ||| | ||||| ||||| || || ||||| |||||||| | |||| || | |||| Sbjct 541 AACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCA-TCTT 599 Query 139614 CGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 139673 | || |||||||||||| |||| ||||| || ||||| || ||||| ||||| || || Sbjct 600 CAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-C 658 Query 139674 TGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 ||| | || | ||| | | || | || || | ||||||||| | || | ||| Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || || || || || || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq56144 Length=1637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| || || | ||||||||||| || || |||||||| | || ||| ||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || || || || ||| |||||| || || ||||| ||||| || ||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | |||||| | || || ||||| | || | || || Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||||| ||||| |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||| | ||| || || || || ||||| || ||| Sbjct 979 GCCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGC 1038 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | |||||| | |||||| || ||| |||||| || |||||||||||||| Sbjct 1039 TAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGG 1098 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || || || ||||| ||| | || | ||| | | || | ||||||| || || | Sbjct 1099 AATTCCCTCCTTGTC-TTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGGATTCAA 1157 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | || || ||||| | ||||| || || |||||||| Sbjct 1158 CCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCACAAAGATTTGCAT 1206 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTT 139613 ||| | ||||| ||||| || || ||||| |||||||| | |||| || | |||| Sbjct 541 AACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCA-TCTT 599 Query 139614 CGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 139673 | || |||||||||||| |||| ||||| || ||||| || ||||| ||||| || || Sbjct 600 CAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-C 658 Query 139674 TGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 ||| | || | ||| | | || | || || | ||||||||| | || | ||| Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || || || || || || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq56143 Length=1408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||| || || | ||||||||||| || || |||||||| | || ||| ||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || || || || ||| |||||| || || ||||| ||||| || ||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 ||| || || | | || | |||||| | || || ||||| | || | || || Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | |||||| ||||| |||||||| Sbjct 949 TCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTT 139613 ||| | ||||| ||||| || || ||||| |||||||| | |||| || | |||| Sbjct 541 AACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAGCAAGAGTGCGTCCA-TCTT 599 Query 139614 CGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 139673 | || |||||||||||| |||| ||||| || ||||| || ||||| ||||| || || Sbjct 600 CAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTGGTATCCCTTCCTTATC-C 658 Query 139674 TGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 ||| | || | ||| | | || | || || | ||||||||| | || | ||| Sbjct 659 TGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCACCTCCAAAGTAATTGTC 718 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || || || || || || ||||| Sbjct 719 TTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 >seq2801 Length=469 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || || | || | ||||| || || || || || ||||| ||||| Sbjct 299 CCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 240 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | ||||| |||||| |||| || | ||||||||| ||||| Sbjct 239 AGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGA 180 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || |||||| ||| | | || | || || | ||||||| Sbjct 179 ATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCACC 120 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| || | || ||||||||||| ||||| || || |||||||| Sbjct 119 TCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCAT 73 >seq2799 Length=391 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || || || || ||||| ||||||||| || || | |||||||||||| Sbjct 270 TGAAGGGTGGATTCCTTCTGAATATTATAATCGGCCAGAGTTCGGCCATCTTCGAGCTGT 211 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| |||| || | |||||||| || || || || |||||||| || || Sbjct 210 TTTCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGGATACCCTCTTTGTCTTGTATCTTG 151 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | |||||| | ||| ||||||| ||| | ||||| || ||| Sbjct 150 GCCTTCACATTGTCAATTGTGTCAGAACTCTCAACCTCAAGGGTGATGGTCTTTCCTGTC 91 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | || || || ||||| ||||| Sbjct 90 AGAGTCTTCACAAATATCTGCAT 68 >seq33732 Length=802 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || || ||||| || ||||| |||||| || || || Sbjct 693 CGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCA 634 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 |||||||||||||| |||||| |||| || | || || || || || ||||| |||||| Sbjct 633 TCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGAATGCCCTCTTTG 574 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| | ||||||||| | || | Sbjct 573 TCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACCTCTAGTGTAATG 514 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | ||||| || || ||||||||| Sbjct 513 GTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCATA 478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495601054472800