Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq33732 127 1e-24 seq34025 118 8e-22 seq56144 109 4e-19 seq2805 109 4e-19 seq2804 104 2e-17 seq2803 98.7 7e-16 seq2802 96.9 3e-15 seq2801 91.5 1e-13 seq2799 89.7 4e-13 seq56145 86.0 5e-12 seq56143 86.0 5e-12 seq48696 86.0 5e-12 >seq33732 Length=802 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| |||||||| ||||| || |||||||||||| | | |||| | ||| Sbjct 690 AACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATCT 631 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||||||||| | || | | |||||||| |||||| || |||||||| Sbjct 630 TCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGAATGCCCTCTTTGTCC 571 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| | |||||||| || | | || || |||| |||||||| Sbjct 570 TGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACCTCTAGTGTAATGGTC 511 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || ||||| ||||| ||||||||| Sbjct 510 TTTCCTGTAAGGGTTTTGACAAAGATTTGCATA 478 Score = 105 bits (116), Expect = 5e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||||||||||||||| || || || ||||||||||| || | | | | || ||| Sbjct 459 ACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCT 400 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| || ||||| | || | ||| || || || || || || || ||||| | Sbjct 399 AGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGA 340 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | ||||||||||| | | || || || | || ||||| || Sbjct 339 ATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTG 280 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAA 15372 || ||||| || || ||||| |||||||| ||||||| Sbjct 279 CCAGTCAGGGTCTTCACAAAGATTTGCAT-CTTGAAAA 243 >seq34025 Length=456 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| |||||||| ||||| || |||||||||||| | | |||| | ||| Sbjct 344 AACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATCT 285 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||||||||| | ||||| | || || || ||| ||||| || ||||| Sbjct 284 TCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCT 225 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||||| ||| || | || ||||| || | ||||||| |||||||||||||| Sbjct 224 TGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACCTCTAAGGTAATGGTC 165 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| ||| || || || || |||||| Sbjct 164 TTTCCGGTCAAAGTCTTCACGAAGATCTGCATA 132 >seq56144 Length=1637 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || || || || || || ||||||||||| ||| ||| ||| ||||||| || ||| Sbjct 1004 TGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTCCAACTGT 1063 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279 || || || | ||||| || || || ||| |||||||| || ||||| ||| || Sbjct 1064 TTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTGTCTTGAATCTTA 1123 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || || | || ||||| ||| ||| || |||| ||| ||||||||||| || Sbjct 1124 GCT-TTCACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATGGTTTTACCGGT 1182 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| ||||| |||||||| Sbjct 1183 TAGGGTTTTCACAAAGATTTGCAT 1206 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || || || ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||| || || || | ||||| || ||||| || ||||||||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq2805 Length=580 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| |||||||| ||||| || |||||||||||| | | |||| | ||| Sbjct 468 AACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATCT 409 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||||||||| | || | | ||||| ||| || || ||||| ||||| Sbjct 408 TCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTCCTTGTCT 349 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| ||| ||| | ||||||||||| | | || || || | || ||||| Sbjct 348 TGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTC 289 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || || || || || ||||||||||| || Sbjct 288 TTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 >seq2804 Length=712 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||| || || || ||||| || ||||||||||| || | |||| | || Sbjct 696 AACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAAAGTTCTGCCATCC 637 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||||||||| | || | | ||||||||| |||||| || ||||| || Sbjct 636 TCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCC 577 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| || ||| | || |||||||| | || || || | ||| ||||| Sbjct 576 TGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGACCTCAAGGGTGATGGTC 517 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| ||||| |||||||| Sbjct 516 TTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || || || || || |||||||||||||| || | | | || ||| Sbjct 465 ACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCAGCAAGGGTACGGCCATCCTCT 406 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||||||| || | || | ||| || ||||| ||| || ||||| ||||| | Sbjct 405 AGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGGATCCCTTCCTTGTCTTGA 346 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | ||||||||||| | | || || || | || ||||| || Sbjct 345 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 286 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || || || || ||||||||||| || Sbjct 285 CCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 >seq2803 Length=533 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 |||||| | || | | ||| | ||| || || || || || ||||| || ||||| Sbjct 194 GCCACCACGCAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGC 253 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 ||| | | | || || ||||| || ||||| | || | | || ||||| || Sbjct 254 CAGAGTACGACCATCCTCCAATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGG 313 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||| |||||||| |||||| |||| ||| | || || ||||| | ||||||| Sbjct 314 AATTCCCTCTTTGTCCTGAATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTAC 373 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || || || || || || ||||||||||||||| Sbjct 374 CTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCATA 422 >seq2802 Length=1024 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | ||| || || || || || ||||| || ||||| ||| | | | || || Sbjct 703 AACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGCCAGAGTACGACCATCCTC 762 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||| || ||||| | || | | || ||||| |||||||| |||||||| Sbjct 763 CAATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTG 822 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| |||| ||| | || || ||||| | ||||||| || || || ||||| || Sbjct 823 AATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTACCTCCAAAGTTATGGTCTT 882 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || || ||||||||||||||| Sbjct 883 TCCGGTAAGGGTCTTGACAAAAATTTGCATA 913 >seq2801 Length=469 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||| | || | ||||| ||||| || || || ||||||||||| Sbjct 299 CCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 240 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| |||||||| ||||| | || | | ||| || || ||| Sbjct 239 AGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGA 180 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||||| || || | ||||||||||| | | || || Sbjct 179 ATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCACC 120 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | || || ||||| || |||| ||||| ||||| |||||||| || Sbjct 119 TCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCATCTT 70 >seq2799 Length=391 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || || ||||| | || || | |||||||||||| || || || || || |||||| Sbjct 294 CCTCCCCTCAAACGTAGGACAAGATGAAGGGTGGATTCCTTCTGAATATTATAATCGGCC 235 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| ||| | ||||| | ||||| ||||| | || | | || || || ||| Sbjct 234 AGAGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGG 175 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || |||||||| || ||| ||| ||| | || || || || | | || || Sbjct 174 ATACCCTCTTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCAGAACTCTCAACC 115 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||| ||||| || ||||||||||| || ||||| || ||||| Sbjct 114 TCAAGGGTGATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT 68 >seq56145 Length=1576 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || || || ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||| || || || | ||||| || ||||| || ||||||||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq56143 Length=1408 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || || || ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||| || || || | ||||| || ||||| || ||||||||||||||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||| || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || || |||||||| Sbjct 949 TCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 >seq48696 Length=1151 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || || || || |||||||| || ||| | | |||| || | || Sbjct 280 ATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCGTCCTCAAGCTG 221 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | |||| |||||| ||||| ||||||||||| ||||| || || Sbjct 220 TTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTT 161 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || | || ||||| || | | || || || | || ||||| || || || Sbjct 160 AGCCTTGACGTTGTCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATGGTCTTTCCGGT 101 Query 15340 CAGAGTTTTTACAAAAATTTGCATATT 15366 || ||||| || || |||||||| || Sbjct 100 GAGGGTTTTAACGAATATTTGCATCTT 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361849650769119