Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2805 98.7 8e-16 seq34025 91.5 1e-13 seq33732 91.5 1e-13 seq2803 89.7 4e-13 seq2802 89.7 4e-13 seq2801 89.7 4e-13 seq2804 86.0 5e-12 >seq2805 Length=580 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | ||| || || |||||||| || |||||||||||| ||| |||| | ||| Sbjct 469 CAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATC 410 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | |||||||| ||| | || ||||||||||||||| || | ||||| ||||| Sbjct 409 TTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGGATCCCTTCCTTGTC 350 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 ||| || || || | | | | | ||| | || ||| | || ||||| Sbjct 349 TTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGT 290 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACT 20217 ||||| || | || || || ||||||||||| || || || Sbjct 289 CTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTTGAATCT 248 >seq34025 Length=456 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | ||| || || |||||||| || |||||||||||| ||| |||| | ||| Sbjct 345 CAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATC 286 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | |||||||| ||| | || | |||||| ||||| || | || || ||||| Sbjct 285 TTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTC 226 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 |||||| ||||| | ||| | || | ||| || | ||||||||| Sbjct 225 TTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACCTCTAAGGTAATGGT 166 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || |||||||| || || || || || ||||| Sbjct 165 CTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 133 >seq33732 Length=802 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | ||| || || |||||||| || |||||||||||| ||| |||| | ||| Sbjct 691 CAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCCAAAGTTCTGCCATC 632 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | |||||||| ||| | || ||||||||||| || || | ||| |||||||| Sbjct 631 TTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGAATGCCCTCTTTGTC 572 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || || || || | | | | | || | ||| || | |||||||| Sbjct 571 CTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACCTCTAGTGTAATGGT 512 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || | ||||||||||| |||||||| Sbjct 511 CTTTCCTGTAAGGGTTTTGACAAAGATTTGCAT 479 >seq2803 Length=533 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || |||||||| || ||||| || ||||| ||| ||| | ||| |||||||| Sbjct 218 ATGCAGAGTAGATTCCTTCTGTATATTATAATCAGCCAGAGTACGACCATCCTCCAATTG 277 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 || || ||| |||| |||||||| || || || | || |||||||| |||||| Sbjct 278 CTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGAATTTT 337 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||||| | ||| | ||| | ||| |||| || ||||| || ||||| Sbjct 338 AGTCTTCACATTATCAATTGTATCAGAACTTTCTACCTCCAAAGTTATGGTCTTTCCGGT 397 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | || ||||||||||||||||| Sbjct 398 AAGGGTCTTGACAAAAATTTGCAT 421 >seq2802 Length=1024 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| || |||||||| || ||||| || ||||| ||| ||| | ||| |||||||| Sbjct 709 ATGCAGAGTAGATTCCTTCTGTATATTATAATCAGCCAGAGTACGACCATCCTCCAATTG 768 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 || || ||| |||| |||||||| || || || | || |||||||| |||||| Sbjct 769 CTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGAATTTT 828 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||||| | ||| | ||| | ||| |||| || ||||| || ||||| Sbjct 829 AGTCTTCACATTATCAATTGTATCAGAACTTTCTACCTCCAAAGTTATGGTCTTTCCGGT 888 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 | || ||||||||||||||||| Sbjct 889 AAGGGTCTTGACAAAAATTTGCAT 912 >seq2801 Length=469 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || || || ||||| || || ||||||||||| | | || | ||||||||||||| Sbjct 275 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCCAATTGT 216 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 || || ||| | |||||||| || ||||| || | ||||| || || ||||| Sbjct 215 TTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTA 156 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 |||||| | | | | | ||| | ||| || | || || |||||||||||| Sbjct 155 GATTTCACGTTGTCTATGGTATCAGAACTCTCCACCTCAAGAGTGATAGTTTTGCCGGTC 96 Query 20186 AACGTTTTGACAAAAATTTGCATTTTTAA 20214 || ||||| ||||| |||||||| || || Sbjct 95 AATGTTTTCACAAAGATTTGCATCTTGAA 67 >seq2804 Length=712 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | ||| || || || ||||| || ||||||||||| | | |||| | ||| Sbjct 697 CAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAAAGTTCTGCCATC 638 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 || | |||||||| ||| | |||||||||||||| ||| || | ||| ||||| || Sbjct 637 CTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATC 578 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGTTTCCACGGTAATGG 20174 ||| || ||| || | | ||| | ||| || | || || | ||| |||| Sbjct 577 CTGAATCTTGGCTTTGACATTGTCAATGGTATC-AGAGCTCTCGACCTCAAGGGTGATGG 519 Query 20175 TTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | || || || | ||||| ||||| |||||||| Sbjct 518 TCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419205414853179