Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq63568 601 4e-167 seq65592 161 1e-34 seq67767 102 1e-16 seq70055 95.1 2e-14 >seq63568 Length=1222 Score = 601 bits (666), Expect = 4e-167 Identities = 715/960 (74%), Gaps = 12/960 (1%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | |||||||| || ||||| || || | || |||||||| || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | |||||||| ||||| | Sbjct 1023 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || || |||||| |||| |||||| | |||||||| | Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || || |||||||| |||| ||| || || ||||| | ||||| || || | Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 846 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | ||||||||||| || ||||||| ||| |||| ||||||||||||||| ||||| | | Sbjct 845 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 786 Query 135672 TCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACC 135731 | | |||||| | | ||||| | |||||||||||| ||||||||||| || | Sbjct 785 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC 726 Query 135732 GACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTG 135791 | ||||||||||||||||||||| ||| || || ||||| || || || |||||||||| Sbjct 725 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTG 666 Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTC--TTTCAGTGATGGTATGCCGCTTGG 135849 | |||||| || ||||||| |||| ||||| |||||| |||||||||| || || Sbjct 665 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAG--ATGGTATGCCTCTAGG 608 Query 135850 CATTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCA 135909 || ||||| ||||| |||| ||| |||| || ||||| || || || ||||| ||||| Sbjct 607 AATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 548 Query 135910 TCCTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCA 135969 || || |||||||| || || ||||| || ||||| || || || ||| ||||||||| Sbjct 547 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 488 Query 135970 TGGATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTA 136029 || || | || || |||||| | | | || || || || ||||| || | Sbjct 487 CGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 428 Query 136030 TGGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTT 136089 ||||||| ||||||||||| ||||| || || || ||||| |||||||| ||||| || Sbjct 427 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTT 368 Query 136090 CGGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCT 136149 || || |||||||||||||||| |||||||| ||||| || |||| || ||||| Sbjct 367 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCT 308 Query 136150 TGCTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCT--ACGATGGCG 136207 |||||||||||||| || |||||||||||| | || | || |||| || ||||| Sbjct 307 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG--TATCAGCACTATGGCT 250 Query 136208 TTCAACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTC 136267 ||||| | ||||| ||||| || ||||| || | || | | ||||||||||| | Sbjct 249 TTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 190 Query 136268 AACACCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 || |||||||| ||| | | || |||||| || |||||||| || ||||| || ||| Sbjct 189 AATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGT 130 >seq65592 Length=292 Score = 161 bits (178), Expect = 1e-34 Identities = 152/194 (78%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138684 GGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAA 138743 ||||| || || ||||| || || ||||| || || || |||||||| || ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 138744 GATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCC 138803 ||||||||||| ||||| ||||||||||| || ||||| | || |||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 138804 TGGATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCA 138863 |||||||| || ||||| ||||| |||||| || | || ||||| || || | ||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 138864 AGAGGCAACGCTCT 138877 | || |||||||| Sbjct 198 CGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 102 bits (112), Expect = 1e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 138128 CCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGGGCCTTTAGTCT 138187 ||| |||| ||| | || || || ||||||||||| || || ||||| || || | | Sbjct 11 CCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATT 70 Query 138188 GATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGCA--TCCGTCCCTA 138244 || || || ||| | || || ||||| | |||| |||| | || | || || || Sbjct 71 AATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTT---CAATTGCGGCCTTA 127 Query 138245 CAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCC 138304 || |||||||||||||| ||||| || ||||| || || || |||||||| ||||| Sbjct 128 TAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCC 187 Query 138305 TTTGGGTCAATCCAGTTGGTTCTTTG 138330 |||| || || |||||||||||| Sbjct 188 ACTGGGCCAGTCTGGTTGGTTCTTTG 213 >seq70055 Length=284 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 ||||||||||| | | || || ||||| |||||||||||||| || ||| | || | Sbjct 232 TGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGTCTATTGCTCT 173 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| || ||||| ||| | || || ||| | || || || || ||||| || | Sbjct 172 TTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTTGTAACTTCAT 113 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTG 138054 |||| || || || ||||| | ||| | ||||| ||| ||| | || ||||| | Sbjct 112 GGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTAACTGCAGCAG 53 Query 138055 TTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 138106 | || ||||||||| || | | | || ||| | | |||| |||||||| Sbjct 52 TCTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTGTGGGGTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627381956713600