Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq46009 114 1e-20 seq25477 84.2 2e-11 >seq46009 Length=1074 Score = 114 bits (126), Expect = 1e-20 Identities = 385/595 (65%), Gaps = 19/595 (3%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || ||||||||||| || | ||| || || ||| |||| |||||| || ||||| | | Sbjct 593 CAAGCAAAATCACAGTGAAGACCCTCGTCTCTAGAGATTAGTTCATTTGAGAATGTCAGA 534 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAAAGAA 21594 || ||||||| |||||||||||| | ||| |||| || | || | || |||||| || || Sbjct 533 CCTGGCATTAGTCCTCTCTTTTTAAGCCAGAATA-TGGCACAGAAGCTTCCTGAGAAAAA 475 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG----ATTCTTTAT 21650 || || ||||| ||||| |||| | | || | ||| || | | || || Sbjct 474 TATCCCTTCAACACATGCAAAACCAACAAGCCTCTCCGCAAATGAAGTGGAACTGTTAAT 415 Query 21651 CCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAG 21710 |||| || | |||||||| ||||| | || |||| || | ||||| | Sbjct 414 CCAA-CTCAA------TGCCCATTCAGCCTTCCTTGCAACACAAGGAAGATTTTCAATTG 362 Query 21711 CTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 | || || | | || || || || ||| | || ||||| Sbjct 361 CATTGAACAATTTATGCTTCTCGACTGAATCTTTAATATATGTCTCCAACAGCAAACTAT 302 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 |||| |||||||| ||||| || || ||||||||||| ||||| || | ||||| | Sbjct 301 ACATCTCAGAATGAATATTCTCGATTGCTATCTGAAACCCGTAGAATGCCCGAGCCTCCG 242 Query 21831 AACATTGAACCTCGGAAT-AAAATCGTTG-AGCCAAGTTTTCATTTACTATTCCATCACT 21888 |||||| || | | | || | ||| |||||| || || || ||||||||| Sbjct 241 GGATTTGAACGTC--ATTCAGAAACCTTGCAGCCAAATTCTCCAAAACGATTCCATCAGA 184 Query 21889 GGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTT 21948 | |||||||| || | | | | ||| || | ||| |||| || || Sbjct 183 TGTTGCAAAAAAAGCAAGGACGTGTGATATGAAGTGCTTCTCGGAGTCTGACAAGGTTGC 124 Query 21949 CCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGC 22008 ||||| || ||| | || | |||||||||||| | ||||| || || || ||| Sbjct 123 CCAATGATGTACATCATAGGAGAGATCTACTTCTTCGGCGGTCCAGAAACTGGCTTCAGC 64 Query 22009 CTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACA-AACCT 22062 |||||| ||||| ||||| | || ||| |||||||| | |||| ||||| Sbjct 63 CTTTTTGTACATCTCCCAGAGTTGTTTGTATCGAATTGGAAACA-TACAGAACCT 10 >seq25477 Length=343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 21190 ATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCAT 21249 ||| || | ||| | || || || || || || || |||| | |||||| | ||||| Sbjct 343 ATACTCTCCAACGCGCTTCTCAAAGAAGTTAGTTTTCCCTTGAAGTGATATCAACTCCAT 284 Query 21250 AAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCT 21309 ||||||| ||||| |||| ||| | | ||| ||| || | ||| | || ||||| Sbjct 283 CCAATCAAAAGGATTCTCAGCATTATAGACTTTCCCACACCCAACTTCACACAACAATCT 224 Query 21310 ATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 |||||| ||||| || ||||| | || |||||| || | ||||| || | ||| Sbjct 223 ATCTGCAACAAACTCAATATACTTACTCATTAACTCTCCGTTCATCCCAACCAA 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531404410227160