Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2805 104 2e-17 seq56144 95.1 1e-14 seq53415 93.3 4e-14 seq48430 91.5 1e-13 seq56143 89.7 5e-13 seq60038 87.8 2e-12 seq56145 86.0 6e-12 seq62831 84.2 2e-11 >seq2805 Length=580 Score = 104 bits (114), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAA 26822 ||| |||||| | || || || || | ||||| || | ||||| ||||| | ||| Sbjct 253 CAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAG 312 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 | | || ||||| || | || || |||||| ||||| |||||||| || ||| Sbjct 313 TTCA--GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCC 370 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 |||||||| || ||||| | | |||||||| |||||||||| |||| | ||| Sbjct 371 GATCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGAT 430 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || |||||||| || ||||||| || || ||||| | || || Sbjct 431 TACAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 483 >seq56144 Length=1637 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||| || ||| | || ||| | || | ||||| | Sbjct 1206 ATGCAAATCTTTGTGAAAACCCTAACCGGTAAAACCATAACCCTAGAGGTTGAATCCTCC 1147 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| ||||| || || || ||||||||||| Sbjct 1146 GACACCATCGACAACGTGAAAGCTAAGATTCAAGACAAGGAGGGAATTCCTCCCGATCAG 1087 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | ||| ||||| | ||||| | ||| | | |||||| ||| Sbjct 1086 CAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGACGGCCGAACCCTAGCCGACTACAAC 1027 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| || |||| ||||| || Sbjct 1026 ATACAGAAGGAATCAACGCTCCACCTGGTACT 995 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| |||||| | ||||| | || | ||||| Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | || || ||||| || || | |||| | || ||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| |||||| ||||| |||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq53415 Length=940 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || ||||| |||| || || |||| ||| |||| | || || Sbjct 151 CAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTTGAGTC 210 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | ||||| ||||| ||||| || ||||| ||||| || Sbjct 211 TTCCGACACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGGATTCCTCCAGA 270 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || | ||||| | || ||| || || | ||||| | | | || |||||| Sbjct 271 TCAGCAGCGTCTCATCTTCGCCGGGAAGCAGTTGGAAGACGGCCGCACTCTCGCCGACTA 330 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || ||| ||||||| ||||| Sbjct 331 CAACATCCAGAAGGAGTCAACTCTCCATCTCGTCCT 366 >seq48430 Length=787 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 26796 GGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAG 26855 |||||| | |||||| |||| | || | |||||||||||| | ||||| ||| Sbjct 3 GGAAAACC-ATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGACCAAG 61 Query 26856 ATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAA 26915 ||| ||||||||||| || ||||| ||||| || | | |||| || ||| || || Sbjct 62 ATTCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAAGCAG 121 Query 26916 CTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTG 26975 || ||||||| | | | | ||| || || || || || ||||||||| | ||||| Sbjct 122 CTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCATCTT 181 Query 26976 GTCCTGAGACTTAGAGGAGGAA 26997 || || || ||| | || |||| Sbjct 182 GTTCTCAGGCTTCGTGGTGGAA 203 >seq56143 Length=1408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||||||||| | ||||| | || | ||||| Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | || || ||||| || || | |||| | || ||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| |||||| ||||| |||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq60038 Length=254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26763 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 || || ||||| | ||||| ||||| | || || || | |||||| | || | || Sbjct 120 AAGAAGATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACTATCACCCTTGAGGTGGAG 179 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 |||| |||||||||||| | |||||| ||||||| |||||||||||||| ||||| Sbjct 180 TCAAGCGACACCATCGACAATGTCAAAGCAAAGATTCAGGACAAAGAAGGGATTCCTCCG 239 Query 26883 GATCAACAAAG 26893 ||||| || || Sbjct 240 GATCAGCAGAG 250 >seq56145 Length=1576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| |||||| | ||||| | || | ||||| Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | || || ||||| || || | |||| | || ||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||| |||||| ||||| |||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq62831 Length=874 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| ||||| || ||||| || || || || | |||| | ||| || || || ||| Sbjct 2 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCCGGTAAGCAGCTGGAA 61 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | | | || |||||||||||||||||||| || | || |||||||| Sbjct 62 GATGGTCGCACTCTTGCTGATTATAACATTCAAAAAGAATCAACGCTTCACTTGGTCCTG 121 Query 26982 AGACTTAGAGGAGGAA 26997 || || |||||||||| Sbjct 122 AGGCTCAGAGGAGGAA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478215694298480