Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq48430 109 5e-19 seq2805 96.9 3e-15 seq56143 93.3 4e-14 seq56145 89.7 4e-13 seq56144 89.7 4e-13 seq60038 84.2 2e-11 seq62831 82.4 7e-11 >seq48430 Length=787 Score = 109 bits (120), Expect = 5e-19 Identities = 131/177 (74%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 |||||| | || ||| |||| |||||| || |||||||||||| | ||||| ||| Sbjct 3 GGAAAACC-ATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGACCAAG 61 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 ||| ||||||||||| || ||||| ||||| ||| | |||||| || ||| ||||| Sbjct 62 ATTCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAAGCAG 121 Query 24138 CTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 || ||||||| | | | | |||||| || || || || |||||||| ||||| Sbjct 122 CTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCAT 178 >seq2805 Length=580 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || | ||||| || | || || ||||||| ||| Sbjct 253 CAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAG 312 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || ||||| || | || || |||||| ||||| ||||| || || ||||| Sbjct 313 TTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGA 372 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||||||| || || | | ||||| || |||||||||| ||||| | |||||| Sbjct 373 TCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTA 432 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || |||||||| || | ||| | ||||| Sbjct 433 CAACATCCAGAAAGAATCCACCCTCCATCTTGTGTT 468 >seq56143 Length=1408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||||||||| | || || | || || || || Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || |||||||| || || | |||| | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| ||||| | ||||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGT 770 >seq56145 Length=1576 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| |||||| | || || | || || || || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || |||||||| || || | |||| | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| ||||| | ||||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGT 770 >seq56144 Length=1637 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| |||||| | || || | || || || || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||||||||| || ||||| |||||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || |||||||| || || | |||| | |||||||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || ||||| ||||| | ||||| || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGT 770 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| |||| || ||| | || ||| | || || || || | Sbjct 1206 ATGCAAATCTTTGTGAAAACCCTAACCGGTAAAACCATAACCCTAGAGGTTGAATCCTCC 1147 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| |||||| ||||| || || || ||||||||||| Sbjct 1146 GACACCATCGACAACGTGAAAGCTAAGATTCAAGACAAGGAGGGAATTCCTCCCGATCAG 1087 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | ||| || || | ||||| | | ||| | | ||| || ||| Sbjct 1086 CAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGACGGCCGAACCCTAGCCGACTACAAC 1027 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 1026 ATACAGAAGGAATCAAC 1010 >seq60038 Length=254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 || || ||||| | ||||| ||||| | || || || | || ||| | || || ||| Sbjct 120 AAGAAGATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACTATCACCCTTGAGGTGGAG 179 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 | | |||||||||||| | |||||| ||||||| ||||||||||| || ||||| Sbjct 180 TCAAGCGACACCATCGACAATGTCAAAGCAAAGATTCAGGACAAAGAAGGGATTCCTCCG 239 Query 24105 GATCAACAGAG 24115 ||||| ||||| Sbjct 240 GATCAGCAGAG 250 >seq62831 Length=874 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| ||||| || ||||| || || ||||| |||||| | ||| ||||| || ||| Sbjct 2 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCCGGTAAGCAGCTGGAA 61 Query 24144 GATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203 |||| | | | ||||||||||||||||||||||| || |||| || || | Sbjct 62 GATGGTCGCACTCTTGCTGATTATAACATTCAAAAAGAATCAACGCTTCACTTGGTCCTG 121 Query 24204 AGATTGAGAGGAGGA 24218 || | ||||||||| Sbjct 122 AGGCTCAGAGGAGGA 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544798412145