Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2805 95.1 1e-14 seq2804 86.0 5e-12 seq2801 84.2 2e-11 >seq2805 Length=580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA--A 115334 ||||| || ||||||||||| || || || ||||| || || ||||| || ||||| Sbjct 248 AGATTCAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTT 307 Query 115335 CGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTC 115393 |||| ||| || | ||||| || || || ||| || || ||||| || Sbjct 308 GAGAGTTCAGATAC---CATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATC 364 Query 115394 CCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATG 115453 || ||||| || || || || | ||| |||||||| | ||||||| || ||| || Sbjct 365 CCGCCCGATCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTG 424 Query 115454 GCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||| || ||||| || || | ||| | |||||| || | || || || Sbjct 425 GCCGATTACAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGG 483 >seq2804 Length=712 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA--A 115334 ||||| || ||||||||||| || || || ||||| || || ||||| || ||||| Sbjct 248 AGATTCAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTT 307 Query 115335 CGGAGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTC 115393 |||| ||| || | ||||| || || || ||| || || ||||| || Sbjct 308 GAGAGTTCAGATAC---CATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATC 364 Query 115394 CCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATG 115453 || ||| ||||| | || |||| ||| ||||||||| |||| |||| | ||| | Sbjct 365 CCACCTGACCAGCAGCGTCTCATTTTTGCCGGCAAACAACTAGAGGATGGCCGTACCCTT 424 Query 115454 GCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTG 115495 || ||||| ||||| || || || ||||| | ||| ||||| Sbjct 425 GCTGATTACAACATACAGAAGGAATCTACACTCCATTTGGTG 466 >seq2801 Length=469 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/238 (68%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 115278 GATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGG 115337 |||| || |||||||| ||||| ||||| | || || ||||| || || | || || Sbjct 65 GATTCAAGATGCAAATCTTTGTGAAAACATTGACCGGCAAAACTATCACTCTTGAGGTGG 124 Query 115338 AGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 || || || | | |||| || ||| ||||| ||||| ||||| | || Sbjct 125 AGAGTTCTGATACCATAG-ACAACGTGAAATCTAAAATCCAAGATAAGGAAGGTATTCCT 183 Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456 |||||||||||| ||||| | ||| || |||||||| ||||||| ||| | || Sbjct 184 CCTGATCAGCAAAGGCTTATCTTTGCTGGGAAACAATTGGAAGATGGTCGCACCCTTGCT 243 Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| ||||| || || || || ||| | || | || | ||||| |||| |||| Sbjct 244 GATTACAACATCCAGAAGGAATCCACTCTTCACCTTGTACTCCGATTGAGAGGTGGAA 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424956976703080