Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2804 127 2e-24 seq33732 125 6e-24 seq62831 123 2e-23 seq34025 116 3e-21 seq2805 114 1e-20 seq56145 107 2e-18 seq56144 107 2e-18 seq56143 104 2e-17 seq48696 98.7 9e-16 seq48430 98.7 9e-16 >seq2804 Length=712 Score = 127 bits (140), Expect = 2e-24 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| ||||||| ||| || Sbjct 257 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 316 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| ||||| |||||||| ||||||||| Sbjct 317 GATACCATAGA--CAATGTTAAGGCCAAGATTCAA-GACAAGGAAGGGATCCCACCTGAC 373 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||||||||||||| |||| |||| || || | | |||||| Sbjct 374 CAGCAGCGTCTCATTTTTGCCGGCAAACAACTAGAGGATGGCCGTACCCTTGCTGATTAC 433 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || ||||| ||||| Sbjct 434 AACATACAGAAGGAATCTACACTCCATTTGGTGCT 468 >seq33732 Length=802 Score = 125 bits (138), Expect = 6e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || || |||| ||| | || |||||| || Sbjct 479 ATGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCA 538 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| |||||||| || |||||||| |||| Sbjct 539 GACACCATAGA--CAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACC 596 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || | || ||||| |||||||| | ||||||| | ||| ||| |||||||| Sbjct 597 AACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACA 656 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 | || || ||||||||||| || ||| | ||| Sbjct 657 ACATCCAGAAAGAATCCACCCTCCATCTTGTG 688 Score = 109 bits (120), Expect = 5e-19 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || || ||||||| | ||||| ||| || Sbjct 251 ATGCAAATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAAGTTGAGAGTTCA 310 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || ||| | || | ||| ||||| || ||||| || || || Sbjct 311 GATACCATAGA--CAATGTTAAGTCCAAGATTCAA-GACAAGGAGGGGATCCCTCCAGAT 367 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| || || ||| |||| |||| || || | | |||||| Sbjct 368 CAGCAGCGTCTCATTTTTGCTGGTAAGCAACTAGAGGATGGGCGTACCCTTGCTGATTAC 427 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||||||| || ||||||||||| Sbjct 428 AACATCCAGAAGGAATCCACCCTTCATTTAGTGCT 462 >seq62831 Length=874 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| ||||| || || |||||||| ||| || | ||||||||||| || || | ||| Sbjct 2 GACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCCGGTAAGCAGCTGGAA 61 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| ||||||| | | ||||| || |||||||||||||| ||||| || || || || Sbjct 62 GATGGTCGCACTCTTGCTGATTATAACATTCAAAAAGAATCAACGCTTCACTTGGTCCTG 121 Query 25212 AGGCTAAGAGGAGGAA 25227 ||||| |||||||||| Sbjct 122 AGGCTCAGAGGAGGAA 137 >seq34025 Length=456 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || |||| || | || || || || Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || ||||| |||||| ||||| || || || ||||| || || Sbjct 193 GACACCATTGA-TAACGTGAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATCA 251 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| |||||||| | ||||||| | ||| ||| ||||||||| Sbjct 252 GCAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAA 311 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || ||||||||||| || ||| | ||| Sbjct 312 CATCCAGAAAGAATCCACCCTCCATCTTGTG 342 >seq2805 Length=580 Score = 114 bits (126), Expect = 1e-20 Identities = 155/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| ||||||| ||| || Sbjct 257 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 316 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| ||||| |||||||| || || || Sbjct 317 GATACCATAGA--CAATGTTAAGGCCAAGATTCAA-GACAAGGAAGGGATCCCGCCCGAT 373 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | || ||||| |||||||| | ||||||| | ||| ||| ||||||| Sbjct 374 CAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 433 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || || ||||||||||| || ||| | ||| Sbjct 434 AACATCCAGAAAGAATCCACCCTCCATCTTGTG 466 >seq56145 Length=1576 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| ||| |||||||| | || || || || || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||||||||| ||||| || || ||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || ||| | || || | | ||| | | ||||| ||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || ||||| || || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq56144 Length=1637 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| ||| |||||||| | || || || || || Sbjct 978 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||||||||| ||||| || || ||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || ||| | || || | | ||| | | ||||| ||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || ||||| || || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq56143 Length=1408 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | || || ||| |||||||| | || || || || || Sbjct 978 ATGCAAATCTTCGTCAAAACGCTAACTGGAAAAACCATCACACTGGAGGTTGAATCCTCG 919 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||||||||| ||||| || || ||| Sbjct 918 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAAGAAGGAATTCCTCCGGATCAA 859 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || || ||| | || || | | ||| | | ||||| ||| Sbjct 858 CAGCGATTGATCTTTGCGGGAAAGCAACTGGAGGACGGGAGAACTCTTGCGGATTATAAT 799 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| || || || ||||| || || Sbjct 798 ATCCAGAAAGAGTCTACTCTCCATTTGGTTCT 767 >seq48696 Length=1151 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || || || | ||||| || ||||||| |||| || ||| ||| Sbjct 77 ATGCAAATATTCGTTAAAACCCTCACCGGAAAGACCATCACTCTCGAGGTCGAGAGTTCT 136 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| ||||| |||||||| Sbjct 137 GACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCTGACCAG 196 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || ||||| ||||| | || || | ||| ||| | | || ||||| Sbjct 197 CAACGTCTGATCTTCGCCGGAAAACAGCTTGAGGACGGTCGTACTCTTGCTGACTACAAC 256 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| || || ||| | || || Sbjct 257 ATCCAGAAGGAATCAACCCTTCATCTTGTCCT 288 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| ||| ||||||| |||| || ||| ||| Sbjct 305 ATGCAGATCTTTGTTAAGACGCTCACCGGGAAAACCATCACCCTCGAGGTTGAGAGTTCT 364 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| || ||| || || ||||| || || || || || Sbjct 365 GATACCATCGACAACGTGAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCGGATCAG 424 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| || || || | ||||| | | ||| | | ||||||||| Sbjct 425 CAGAGGTTGATCTTTGCGGGTAAGCAGCTGGAAGACGGAAGGACTCTTGCTGATTACAAT 484 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 485 ATCCAGAAGGAGTCGACCCTTCACCTTGTGCT 516 >seq48430 Length=787 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 25025 CGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAG-CA 25081 ||| ||| ||||||| |||| || ||| ||||| ||||| || || ||| | Sbjct 1 CGGGAAAACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGA--CAATGTCAAGACC 58 Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141 || | ||| ||||||||||| || || || || || ||||| | ||||| ||||| || Sbjct 59 AAGATTCAA-GACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAA 117 Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 || | ||||||| ||||| ||| |||||||||||| || || ||||| || || || Sbjct 118 GCAGCTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCA 177 Query 25202 TTTAGTGCTAAGGCTAAGAGGAGGAA 25227 | | || || ||||| | || |||| Sbjct 178 TCTTGTTCTCAGGCTTCGTGGTGGAA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432933712009085