Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq63568 556 1e-153 seq65592 147 2e-30 seq67767 111 2e-19 >seq63568 Length=1222 Score = 556 bits (616), Expect = 1e-153 Identities = 720/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 |||||| | ||| | ||| || | ||||||||||| |||| |||||||| | Sbjct 1084 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 1025 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || |||||||| | || || | Sbjct 1024 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || |||||||| || | || |||||| | || || |||| Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | || || |||||||| || | || | || || || ||| | ||||| || || | Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 846 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | |||||||| ||||| ||||||||||| | || || |||||||||| | || | | Sbjct 845 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 786 Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411 | | |||||| | | || | | |||||||||||||| |||||| | || | Sbjct 785 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC 726 Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471 | || |||||||| ||||||||| || ||||| || || || || ||||| || | | Sbjct 725 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTG 666 Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531 |||| ||| || |||| || | |||||||| || || || | ||||| || || | Sbjct 665 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 606 Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591 || ||| || ||||||| ||| |||| || || || ||||| || || || ||||||| Sbjct 605 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACC 546 Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651 | || || ||| | |||||||| ||||||||||| || || || ||| || ||||||| Sbjct 545 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 486 Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710 | | || ||||| | | | | || | || ||||| |||| ||| ||| || | Sbjct 485 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 427 Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| || |||||||| ||||| ||||| || || || |||||||| ||||| || Sbjct 426 GGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTT 367 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || ||||||||||||| ||| |||||||| |||||||| | || |||||||| Sbjct 366 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTA 307 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890 || || |||||||| || |||||||||||||| || | ||| | ||||| ||||| ||| Sbjct 306 GCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTC 247 Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950 || | || |||||||| || ||||| || | | ||| |||| |||||||| | || Sbjct 246 AATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 187 Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010 || ||||| ||| | | ||||||||| || ||||||||||| ||||| || |||||| Sbjct 186 ACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 127 Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTGC 167039 ||||| || |||||||| || || ||||| Sbjct 126 GCTCATAATTTCCCTCTAGACCTAGCTGC 98 >seq65592 Length=292 Score = 147 bits (162), Expect = 2e-30 Identities = 150/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 168117 TCGGTCTCGCACTTAATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAG 168176 ||||||| || || || || ||||| ||||||||||| ||||| ||| | | ||||||| Sbjct 16 TCGGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAG 75 Query 168177 AGGATCCAGAGTTTGAAACTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTG 168236 | ||||| || ||||| |||||||| || ||||| || ||| | || ||||| | |||| Sbjct 76 AAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTG 135 Query 168237 CCTGGATGGCTCCAGTAGACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGC 168296 | |||||||| | ||| || || ||||||||| || ||||||| || || || | | Sbjct 136 CGTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 195 Query 168297 CAAGAGGCAACGCTCT 168312 || | || |||||||| Sbjct 196 CACGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 111 bits (122), Expect = 2e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 167555 GATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCC 167614 ||||| | | | ||||| || | || || || ||| ||||||| || || ||||| || Sbjct 3 GATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCT 62 Query 167615 TTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAGTAGACTAGTAGGTATCCGT 167674 || | | ||||| |||||| | || |||||||| | | || || | || Sbjct 63 TTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGG 122 Query 167675 CCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATC 167734 ||||| ||||| || || || || ||||| |||||||| ||||| ||||| || || || Sbjct 123 CCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATT 182 Query 167735 TATCCTCTCGGACAGTCCAGTTGGTTCTTTG 167765 ||||| || || ||||| |||||||||||| Sbjct 183 TATCCACTGGGCCAGTCTGGTTGGTTCTTTG 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566702637826400