Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq2803 109 5e-19 seq2802 109 5e-19 seq2804 98.7 8e-16 >seq2803 Length=533 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || | ||||| || ||||| || |||| ||| Sbjct 421 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 362 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || |||||| |||||||| || |||| || || Sbjct 361 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 302 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| |||| ||| || || |||||||| ||| | ||| |||| ||||||||| Sbjct 301 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 242 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111414 ||||| || |||||||| || ||| | || | |||||||| |||||| Sbjct 241 ATACAGAAGGAATCTACTCTGCATCTTGTTCTTCGTCTGCGTGGTGGC 194 >seq2802 Length=1024 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||||||||| || | ||||| || ||||| || |||| ||| Sbjct 912 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 853 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || |||||| |||||||| || |||| || || Sbjct 852 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 793 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| |||| ||| || || |||||||| ||| | ||| |||| ||||||||| Sbjct 792 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 733 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111414 ||||| || |||||||| || ||| | || | ||||| ||||||||| Sbjct 732 ATACAGAAGGAATCTACTCTGCATCTTGTTCTTCGTCTTCGCGGTGGC 685 >seq2804 Length=712 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||| ||||| | || || || ||||| ||| | || || | Sbjct 485 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 544 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | || ||| || ||| || ||||| ||| |||| ||| ||| Sbjct 545 GATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCAA 604 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || |||||||| | ||| |||||||| | || ||| | |||| | || ||||| || Sbjct 605 CAGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTAGCAGATTACAAC 664 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||| || || || ||| | ||||||||||| || ||||| Sbjct 665 ATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGTCTTCGTGGTGG 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422655073127800