Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2801 154 1e-32 seq2805 150 2e-31 seq2804 147 2e-30 seq56144 143 2e-29 seq33732 143 2e-29 seq34025 118 9e-22 seq53415 113 4e-20 seq48696 111 1e-19 seq2800 104 2e-17 seq48430 98.7 8e-16 seq2803 86.0 5e-12 seq2802 86.0 5e-12 >seq2801 Length=469 Score = 154 bits (170), Expect = 1e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||| ||||| ||||| || ||||| ||||| |||||||||| ||||| | Sbjct 70 AAGATGCAAATCTTTGTGAAAACATTGACCGGCAAAACTATCACTCTTGAGGTGGAGAGT 129 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| | | ||| ||||| ||||| ||||| |||||||| || ||| Sbjct 130 TCTGATACCATAGACAACGTGAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 189 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | ||||| ||||| || ||||| || || ||| |||||| | | |||||| Sbjct 190 CAGCAAAGGCTTATCTTTGCTGGGAAACAATTGGAAGATGGTCGCACCCTTGCTGATTAC 249 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || |||||||| Sbjct 250 AACATCCAGAAGGAATCCAC 269 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| ||||| || ||| || | Sbjct 301 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAGACCATCACCCTTGAGGTTGAATCCTCT 360 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| || || || || ||||| ||||| || || ||||| Sbjct 361 GATACTATTGATAATGTCAAAGCCAAGATACAGGATAAGGAAGGTATCCCTCCTGATCAG 420 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 || | ||||||||||| || ||||| | ||||| Sbjct 421 CAGAGGCTTATATTTGCAGGGAAACAACTTGAGGA 455 >seq2805 Length=580 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| ||||| || | || || || || ||||||| ||||| || | Sbjct 254 AAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGT 313 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| || | || || |||||||||||||| || || || |||||| Sbjct 314 TCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGAT 373 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | || || ||||| ||||||||| | || ||| | | || | |||||||| Sbjct 374 CAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 433 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || |||||||||||| | ||| | || |||||| | || || ||| Sbjct 434 AACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGGT 484 >seq2804 Length=712 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| ||||| |||||| | || || || || |||| ||||| || || | | | Sbjct 484 GATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTC 543 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| || ||||| || ||||| || || ||||| ||||||||||| || Sbjct 544 TGATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCA 603 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | ||||| ||||| ||||||||| | |||||| | | || | | |||||||| Sbjct 604 ACAGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTAGCAGATTACAA 663 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| ||||| || || | ||| | || ||||| | || || ||| Sbjct 664 CATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGTCTTCGTGGTGGT 712 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| ||||| || | || || || || ||||||| ||||| || | Sbjct 254 AAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGT 313 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| || | || || |||||||||||||| || || ||||| || Sbjct 314 TCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCACCTGAC 373 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || |||||||||||||| |||||||| ||| ||| | | |||||| Sbjct 374 CAGCAGCGTCTCATTTTTGCCGGCAAACAACTAGAGGATGGCCGTACCCTTGCTGATTAC 433 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || ||||| || | ||||| || Sbjct 434 AACATACAGAAGGAATCTACACTCCATTTGGT 465 >seq56144 Length=1637 Score = 143 bits (158), Expect = 2e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| ||||||||||||| | || || || || ||| || || Sbjct 1206 ATGCAAATCTTTGTGAAAACCCTAACCGGTAAAACCATAACCCTAGAGGTTGAATCCTCC 1147 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || ||||||||||||||||| ||||| |||||||| Sbjct 1146 GACACCATCGACAACGTGAAAGCTAAGATTCAAGACAAGGAGGGAATTCCTCCCGATCAG 1087 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || |||||||| |||||||| || || ||| ||| | |||| |||||| Sbjct 1086 CAGCGGTTGATCTTTGCCGGAAAACAGTTGGAAGACGGCCGAACCCTAGCCGACTACAAC 1027 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 1026 ATACAGAAGGAATCAAC 1010 >seq33732 Length=802 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||| ||||| || || | || || || || ||||||||||||| || | Sbjct 248 AAGATGCAAATCTTTGTGAAGACCCTGACTGGCAAGACCATCACTCTTGAAGTTGAGAGT 307 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | ||| || | || || ||||||||||||||||| || || || ||| Sbjct 308 TCAGATACCATAGACAATGTTAAGTCCAAGATTCAAGACAAGGAGGGGATCCCTCCAGAT 367 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || ||||| || || || |||||||| || ||| | | |||||| Sbjct 368 CAGCAGCGTCTCATTTTTGCTGGTAAGCAACTAGAGGATGGGCGTACCCTTGCTGATTAC 427 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || ||||||||| | |||||||| Sbjct 428 AACATCCAGAAGGAATCCACCCTTCATTTAGT 459 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| | || || || || | || || || ||||| | | Sbjct 479 ATGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCA 538 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||| ||||| |||||||| || ||| Sbjct 539 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACCAA 598 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||||||| | || ||| | | || | ||||||||||| Sbjct 599 CAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 658 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||||||| | ||| | || |||||| | || || ||| Sbjct 659 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGGT 706 >seq34025 Length=456 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| ||||| || || | || | || || |||| | Sbjct 133 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 192 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || |||||| |||||||||||||| || ||||| ||||| Sbjct 193 GACACCATTGATAACGTGAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATCAG 252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||||||| | || ||| | | || | ||||||||||| Sbjct 253 CAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 312 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||||||| | ||| | || |||||| | || || ||| Sbjct 313 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCGACTTCGTGGTGGT 360 >seq53415 Length=940 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| |||| || || ||| | || || || || || | Sbjct 152 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTTGAGTCT 211 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || |||||||||||||| ||||| || ||| Sbjct 212 TCCGACACCATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGGATTCCTCCAGAT 271 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || ||||| || ||||| || || |||||| || |||| ||| Sbjct 272 CAGCAGCGTCTCATCTTCGCCGGGAAGCAGTTGGAAGACGGCCGCACTCTCGCCGACTAC 331 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||| || || || || || Sbjct 332 AACATCCAGAAGGAGTCAAC 351 >seq48696 Length=1151 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||| || |||||||| | ||||| || || ||||||| || || || | Sbjct 74 AAGATGCAAATATTCGTTAAAACCCTCACCGGAAAGACCATCACTCTCGAGGTCGAGAGT 133 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| | |||| || || || |||||||| || ||||| || || Sbjct 134 TCTGACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCTGAC 193 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || |||||||| || || ||||| |||||| | ||||| || || | | || ||| Sbjct 194 CAGCAACGTCTGATCTTCGCCGGAAAACAGCTTGAGGACGGTCGTACTCTTGCTGACTAC 253 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| ||| | ||| | || | || | || |||||| Sbjct 254 AACATCCAGAAGGAATCAACCCTTCATCTTGTCCTCCGTCTCCGTGGAGGT 304 >seq2800 Length=224 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || |||||||| || ||||| ||||| | || || || | | Sbjct 56 ATGCAAATTTTTGTCAAGACTTTAACAGGAAAAACTATCACTTTGGAGGTTGAGAGTTCA 115 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| || ||||| |||||||| ||||| || || ||||| Sbjct 116 GATACCATTGATAATGTGAAAGCTAAGATTCAGGACAAGGAAGGTATCCCTCCTGATCAG 175 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 || | ||||||||||| || ||||| | ||||| Sbjct 176 CAGAGGCTTATATTTGCAGGGAAACAACTTGAGGA 210 >seq48430 Length=787 Score = 98.7 bits (108), Expect = 8e-16 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 22245 CGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAA 22304 ||| ||||| |||| || || || || | || ||| ||| | ||| || |||| || Sbjct 1 CGGGAAAACCATCACCCTCGAGGTCGAGAGCAGCGACACCATCGACAATGTCAAGACCAA 60 Query 22305 AATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACA 22364 ||||||||||| || ||||| || || ||||| || ||| | || || ||||| || || Sbjct 61 GATTCAAGACAAAGAAGGTATCCCTCCGGATCAGCAGCGTTTGATTTTCGCCGGTAAGCA 120 Query 22365 GTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTT 22424 | | || ||| |||||| | |||||||||| || || || ||||| || | ||| | Sbjct 121 GCTTGAAGATGGACGCACCTTGGCCGATTACAATATCCAGAAGGAATCTACTCTTCATCT 180 Query 22425 AGTT 22428 ||| Sbjct 181 TGTT 184 >seq2803 Length=533 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | ||||| || || | ||| | || || |||| | Sbjct 421 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 362 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||| ||||| ||||| ||||| || || || Sbjct 361 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 302 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || || || |||||| || || | | ||||| || Sbjct 301 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 242 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || ||||| || | ||| | ||| | || |||| || || || Sbjct 241 ATACAGAAGGAATCTACTCTGCATCTTGTTCTTCGTCTGCGTGGTGGCTT 192 >seq2802 Length=1024 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | ||||| || || | ||| | || || |||| | Sbjct 912 ATGCAAATTTTTGTCAAGACCCTTACCGGAAAGACCATAACTTTGGAGGTAGAAAGTTCT 853 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||| ||||| ||||| ||||| || || || Sbjct 852 GATACAATTGATAATGTGAAGACTAAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAG 793 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || || || |||||| || || | | ||||| || Sbjct 792 CAGAGGCTAATTTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTGGCTGATTATAAT 733 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || ||||| || | ||| | ||| | || | ||||| || || Sbjct 732 ATACAGAAGGAATCTACTCTGCATCTTGTTCTTCGTCTTCGCGGTGGCTT 683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419346086738335