Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq9379 154 3e-32 seq9378 154 3e-32 seq9377 154 3e-32 seq9376 154 3e-32 >seq9379 Length=2098 Score = 154 bits (170), Expect = 3e-32 Identities = 381/578 (66%), Gaps = 0/578 (0%) Strand=Plus/Minus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| ||||| || | || || || ||| | || | || |||||| |||| | Sbjct 1819 ACAAAGAGCTTATATTGTTTTCAAGGGCAGATCTTCAGAGGTCCATTCCCTCTATGGTTG 1760 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 ||||||| || || || | ||||| || |||| | |||| ||| || || Sbjct 1759 ATGGCCTTAAACCTGGTCAAAGGAAGATTCTTTTTGGCTCATTTAAGAAAAAGTTGTACA 1700 Query 218648 AAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACG 218707 ||||||||||||| || |||||| |||||||| || || |||| ||||| || | Sbjct 1699 AAGAAATTAAGGTTGCCCAGTTTATCGGTTATGTGTCTGAGCACTCTGCTTACCACCATG 1640 Query 218708 GTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||| || ||||| | | ||| | || ||||||||||| | ||||||||| |||| Sbjct 1639 GTGAACAAAGTCTTGCTAGCACAATTATTGGAATGGCACAGGATTTTGTGGGCAGCAACA 1580 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATA 218827 | || || | || || || ||||| |||||| ||||| |||||||| || || Sbjct 1579 ATATCAATCTTCTCAAACCAAATGGTCAATTTGGTACTCGTAACTTGGGTGGTAAAGACC 1520 Query 218828 GTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATC 218887 ||| |||||| || |||| || || | || || || || | ||| || Sbjct 1519 ATGCAAGTGCCAGATACATCTACACTGAGCTAAGTCCGGTTACTCGATGTCTCTTCCATG 1460 Query 218888 AGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGT 218947 ||| |||||| || ||| | ||| | | || ||||| || ||||| || | | Sbjct 1459 AGGATGATGATAAACTTCTTGAATATTTGAATGAGGATGGGAAGTCCATTGAACCAAATT 1400 Query 218948 GGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007 ||||| ||||| ||| || || | || || ||||| | || || |||||||| | Sbjct 1399 GGTATATGCCTATTATACCTTTGGTTCTTGTCAATGGAAGTGAGGGAATTGGGACAGGTT 1340 Query 219008 TCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCA 219067 ||| || ||||||| |||||||| ||| || |||| ||| || | || | Sbjct 1339 GGAGTTCTTACATTCCCAACTACAATCCACGGGAAATTATTGCCAATGTTAGACGATTGT 1280 Query 219068 TATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTAC 219105 | ||| |||| | || |||||| ||| |||||| Sbjct 1279 TGAATGGTGAGGAATTAGTGCCGATGGATCCATGGTAC 1242 >seq9378 Length=3911 Score = 154 bits (170), Expect = 3e-32 Identities = 381/578 (66%), Gaps = 0/578 (0%) Strand=Plus/Minus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| ||||| || | || || || ||| | || | || |||||| |||| | Sbjct 1819 ACAAAGAGCTTATATTGTTTTCAAGGGCAGATCTTCAGAGGTCCATTCCCTCTATGGTTG 1760 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 ||||||| || || || | ||||| || |||| | |||| ||| || || Sbjct 1759 ATGGCCTTAAACCTGGTCAAAGGAAGATTCTTTTTGGCTCATTTAAGAAAAAGTTGTACA 1700 Query 218648 AAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACG 218707 ||||||||||||| || |||||| |||||||| || || |||| ||||| || | Sbjct 1699 AAGAAATTAAGGTTGCCCAGTTTATCGGTTATGTGTCTGAGCACTCTGCTTACCACCATG 1640 Query 218708 GTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||| || ||||| | | ||| | || ||||||||||| | ||||||||| |||| Sbjct 1639 GTGAACAAAGTCTTGCTAGCACAATTATTGGAATGGCACAGGATTTTGTGGGCAGCAACA 1580 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATA 218827 | || || | || || || ||||| |||||| ||||| |||||||| || || Sbjct 1579 ATATCAATCTTCTCAAACCAAATGGTCAATTTGGTACTCGTAACTTGGGTGGTAAAGACC 1520 Query 218828 GTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATC 218887 ||| |||||| || |||| || || | || || || || | ||| || Sbjct 1519 ATGCAAGTGCCAGATACATCTACACTGAGCTAAGTCCGGTTACTCGATGTCTCTTCCATG 1460 Query 218888 AGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGT 218947 ||| |||||| || ||| | ||| | | || ||||| || ||||| || | | Sbjct 1459 AGGATGATGATAAACTTCTTGAATATTTGAATGAGGATGGGAAGTCCATTGAACCAAATT 1400 Query 218948 GGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007 ||||| ||||| ||| || || | || || ||||| | || || |||||||| | Sbjct 1399 GGTATATGCCTATTATACCTTTGGTTCTTGTCAATGGAAGTGAGGGAATTGGGACAGGTT 1340 Query 219008 TCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCA 219067 ||| || ||||||| |||||||| ||| || |||| ||| || | || | Sbjct 1339 GGAGTTCTTACATTCCCAACTACAATCCACGGGAAATTATTGCCAATGTTAGACGATTGT 1280 Query 219068 TATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTAC 219105 | ||| |||| | || |||||| ||| |||||| Sbjct 1279 TGAATGGTGAGGAATTAGTGCCGATGGATCCATGGTAC 1242 >seq9377 Length=3936 Score = 154 bits (170), Expect = 3e-32 Identities = 381/578 (66%), Gaps = 0/578 (0%) Strand=Plus/Minus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| ||||| || | || || || ||| | || | || |||||| |||| | Sbjct 1844 ACAAAGAGCTTATATTGTTTTCAAGGGCAGATCTTCAGAGGTCCATTCCCTCTATGGTTG 1785 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 ||||||| || || || | ||||| || |||| | |||| ||| || || Sbjct 1784 ATGGCCTTAAACCTGGTCAAAGGAAGATTCTTTTTGGCTCATTTAAGAAAAAGTTGTACA 1725 Query 218648 AAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACG 218707 ||||||||||||| || |||||| |||||||| || || |||| ||||| || | Sbjct 1724 AAGAAATTAAGGTTGCCCAGTTTATCGGTTATGTGTCTGAGCACTCTGCTTACCACCATG 1665 Query 218708 GTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||| || ||||| | | ||| | || ||||||||||| | ||||||||| |||| Sbjct 1664 GTGAACAAAGTCTTGCTAGCACAATTATTGGAATGGCACAGGATTTTGTGGGCAGCAACA 1605 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATA 218827 | || || | || || || ||||| |||||| ||||| |||||||| || || Sbjct 1604 ATATCAATCTTCTCAAACCAAATGGTCAATTTGGTACTCGTAACTTGGGTGGTAAAGACC 1545 Query 218828 GTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATC 218887 ||| |||||| || |||| || || | || || || || | ||| || Sbjct 1544 ATGCAAGTGCCAGATACATCTACACTGAGCTAAGTCCGGTTACTCGATGTCTCTTCCATG 1485 Query 218888 AGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGT 218947 ||| |||||| || ||| | ||| | | || ||||| || ||||| || | | Sbjct 1484 AGGATGATGATAAACTTCTTGAATATTTGAATGAGGATGGGAAGTCCATTGAACCAAATT 1425 Query 218948 GGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007 ||||| ||||| ||| || || | || || ||||| | || || |||||||| | Sbjct 1424 GGTATATGCCTATTATACCTTTGGTTCTTGTCAATGGAAGTGAGGGAATTGGGACAGGTT 1365 Query 219008 TCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCA 219067 ||| || ||||||| |||||||| ||| || |||| ||| || | || | Sbjct 1364 GGAGTTCTTACATTCCCAACTACAATCCACGGGAAATTATTGCCAATGTTAGACGATTGT 1305 Query 219068 TATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTAC 219105 | ||| |||| | || |||||| ||| |||||| Sbjct 1304 TGAATGGTGAGGAATTAGTGCCGATGGATCCATGGTAC 1267 >seq9376 Length=2123 Score = 154 bits (170), Expect = 3e-32 Identities = 381/578 (66%), Gaps = 0/578 (0%) Strand=Plus/Minus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| ||||| || | || || || ||| | || | || |||||| |||| | Sbjct 1844 ACAAAGAGCTTATATTGTTTTCAAGGGCAGATCTTCAGAGGTCCATTCCCTCTATGGTTG 1785 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 ||||||| || || || | ||||| || |||| | |||| ||| || || Sbjct 1784 ATGGCCTTAAACCTGGTCAAAGGAAGATTCTTTTTGGCTCATTTAAGAAAAAGTTGTACA 1725 Query 218648 AAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACG 218707 ||||||||||||| || |||||| |||||||| || || |||| ||||| || | Sbjct 1724 AAGAAATTAAGGTTGCCCAGTTTATCGGTTATGTGTCTGAGCACTCTGCTTACCACCATG 1665 Query 218708 GTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACA 218767 |||| || ||||| | | ||| | || ||||||||||| | ||||||||| |||| Sbjct 1664 GTGAACAAAGTCTTGCTAGCACAATTATTGGAATGGCACAGGATTTTGTGGGCAGCAACA 1605 Query 218768 ACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATA 218827 | || || | || || || ||||| |||||| ||||| |||||||| || || Sbjct 1604 ATATCAATCTTCTCAAACCAAATGGTCAATTTGGTACTCGTAACTTGGGTGGTAAAGACC 1545 Query 218828 GTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAATC 218887 ||| |||||| || |||| || || | || || || || | ||| || Sbjct 1544 ATGCAAGTGCCAGATACATCTACACTGAGCTAAGTCCGGTTACTCGATGTCTCTTCCATG 1485 Query 218888 AGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGT 218947 ||| |||||| || ||| | ||| | | || ||||| || ||||| || | | Sbjct 1484 AGGATGATGATAAACTTCTTGAATATTTGAATGAGGATGGGAAGTCCATTGAACCAAATT 1425 Query 218948 GGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGT 219007 ||||| ||||| ||| || || | || || ||||| | || || |||||||| | Sbjct 1424 GGTATATGCCTATTATACCTTTGGTTCTTGTCAATGGAAGTGAGGGAATTGGGACAGGTT 1365 Query 219008 TCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGACAACGTCAAGCGTCTCA 219067 ||| || ||||||| |||||||| ||| || |||| ||| || | || | Sbjct 1364 GGAGTTCTTACATTCCCAACTACAATCCACGGGAAATTATTGCCAATGTTAGACGATTGT 1305 Query 219068 TATCTGGCAAGGAGATGGTACCGATGTCTCCGTGGTAC 219105 | ||| |||| | || |||||| ||| |||||| Sbjct 1304 TGAATGGTGAGGAATTAGTGCCGATGGATCCATGGTAC 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026853603758219