Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2799 107 1e-18 seq33732 100 2e-16 seq2804 98.7 7e-16 seq56145 93.3 3e-14 seq56144 93.3 3e-14 seq56143 93.3 3e-14 seq2805 93.3 3e-14 seq60039 89.7 4e-13 seq34025 82.4 5e-11 seq2803 82.4 5e-11 seq2802 82.4 5e-11 >seq2799 Length=391 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||||||| | || | || ||||| |||||||||||||| ||||| || ||| Sbjct 161 GACAAAGAGGGTATCCCACCGGATCAGCAGAGGCTTATCTTTGCTGGAAAACAGCTCGAA 220 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| |||| |||||||||| ||||||||||||||||| || |||||| | || || Sbjct 221 GATGGCCGAACTCTGGCCGATTATAATATTCAGAAGGAATCCACCCTTCATCTTGTCCTA 280 Query 22047 CGTTTACGAGGAGG 22060 ||||| | ||||| Sbjct 281 CGTTTGAGGGGAGG 294 >seq33732 Length=802 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | || || || |||||||| | || ||| || Sbjct 479 ATGCAAATCTTTGTCAAAACCCTTACAGGAAAGACCATTACACTAGAGGTGGAGAGTTCA 538 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| || || || |||||||| | || ||||| Sbjct 539 GACACCATAGACAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCACCGGACCAA 598 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || ||||||||||||||||| || |||||| | |||| ||||||||||||| Sbjct 599 CAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTACAAC 658 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 || ||||| ||||| || || ||| | || || || Sbjct 659 ATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 693 >seq2804 Length=712 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | || || || ||||| ||| | || || | | Sbjct 485 ATGCAAATCTTTGTGAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAGAGCTCT 544 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || || ||| ||||||||||| | || ||||| Sbjct 545 GATACCATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGCATTCCACCCGACCAA 604 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| |||||||||||||||||||| || || ||| | |||| | || |||||||| Sbjct 605 CAGAGGCTTATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTAGCAGATTACAAC 664 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| || || ||||| ||| | || || ||| | || || || Sbjct 665 ATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGTCTTCGTGGTGG 711 >seq56145 Length=1576 Score = 93.3 bits (102), Expect = 3e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||||| | |||||||||||||| |||||||| |||||| | ||| | || ||||| Sbjct 633 CAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTAT 574 Query 22011 AATATTCAGAAGGAATCTACTCTTCA 22036 |||||||||||||||||||| ||||| Sbjct 573 AATATTCAGAAGGAATCTACACTTCA 548 >seq56144 Length=1637 Score = 93.3 bits (102), Expect = 3e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||||| | |||||||||||||| |||||||| |||||| | ||| | || ||||| Sbjct 633 CAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTAT 574 Query 22011 AATATTCAGAAGGAATCTACTCTTCA 22036 |||||||||||||||||||| ||||| Sbjct 573 AATATTCAGAAGGAATCTACACTTCA 548 >seq56143 Length=1408 Score = 93.3 bits (102), Expect = 3e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||||| | |||||||||||||| |||||||| |||||| | ||| | || ||||| Sbjct 633 CAACAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGCACTCTTGCTGATTAT 574 Query 22011 AATATTCAGAAGGAATCTACTCTTCA 22036 |||||||||||||||||||| ||||| Sbjct 573 AATATTCAGAAGGAATCTACACTTCA 548 >seq2805 Length=580 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || |||| || | || ||||| ||||| || | ||| || Sbjct 253 CAAGATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAG 312 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 |||| || | | | || ||||| || ||| || || || || | || | Sbjct 313 TTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCGCCCGA 372 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 |||||||| || ||||||||||||||||| || |||||| | |||| |||||||||| Sbjct 373 TCAACAGAGGCTCATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTA 432 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 ||| || ||||| ||||| || || ||| | || || || Sbjct 433 CAACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 471 >seq60039 Length=228 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| |||||| | || | |||| || || | || |||||||| |||||||| ||| Sbjct 28 GATAAGGAGGGTATTCCCCCAGACCAGCAAAGGTTGATTTTTGCTGGAAAACAACTCGAA 87 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | ||| |||| ||||| ||||| ||||||||||| || |||||| | || | Sbjct 88 GATGGACGAACCTTGGCTGATTATAATATCCAGAAGGAATCCACCCTTCATCTCGTCCTT 147 Query 22047 CGTTTACGAGGAGG 22060 ||||| | ||||| Sbjct 148 CGTTTGAGGGGAGG 161 >seq34025 Length=456 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||||| | ||||||||||||||||| || |||||| | |||| ||||||||||| Sbjct 250 CAGCAGAGGTTGATCTTTGCTGGCAAACAGCTCGAAGATGGCAGAACTTTGGCCGATTAC 309 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 || || ||||| ||||| || || ||| | || || || Sbjct 310 AACATCCAGAAAGAATCCACCCTCCATCTTGTGTTGCG 347 >seq2803 Length=533 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 21918 AAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAA 21977 |||||| || |||||||| | ||| | |||| ||||| || || |||||||| || Sbjct 337 AAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAGCAGAGGCTAATTTTTGCTGGTAAG 278 Query 21978 CAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 ||| | || ||| ||| |||| ||||| ||||| ||||||||||||||||| ||| Sbjct 277 CAATTGGAGGATGGTCGTACTCTGGCTGATTATAATATACAGAAGGAATCTACTCTGCAT 218 Query 22038 ATGGTATTACGTTTACGAGGAGG 22060 | || | ||| | || || || Sbjct 217 CTTGTTCTTCGTCTGCGTGGTGG 195 >seq2802 Length=1024 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 21918 AAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAA 21977 |||||| || |||||||| | ||| | |||| ||||| || || |||||||| || Sbjct 828 AAAATTCAGGACAAAGAGGGAATTCCTCCAGACCAGCAGAGGCTAATTTTTGCTGGTAAG 769 Query 21978 CAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 ||| | || ||| ||| |||| ||||| ||||| ||||||||||||||||| ||| Sbjct 768 CAATTGGAGGATGGTCGTACTCTGGCTGATTATAATATACAGAAGGAATCTACTCTGCAT 709 Query 22038 ATGGTATTACGTTTACGAGGAGG 22060 | || | ||| | || || || Sbjct 708 CTTGTTCTTCGTCTTCGCGGTGG 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357798939894286