Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq33732 118 9e-22 seq2804 118 9e-22 seq56145 107 2e-18 seq56144 107 2e-18 seq56143 107 2e-18 seq48430 102 7e-17 seq2805 102 7e-17 seq34025 100 2e-16 seq60038 87.8 2e-12 seq53415 86.0 5e-12 >seq33732 Length=802 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| ||| || | ||| | || |||||||| || |||||||||||| Sbjct 708 ATACCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCG 649 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| || ||||| ||||| ||||||| | |||||||||||| Sbjct 648 GCCAAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGT 589 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| ||||| || | | || | |||||| | || Sbjct 588 GGAATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCC 529 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || || ||||| ||||| || ||||| Sbjct 528 ACCTCTAGTGTAATGGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCAT 479 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||||| | || ||||| || || ||||||||||| Sbjct 480 ATACCACCACGGAGACGGAGCACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCA 421 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || ||||| |||||||| | ||||||||||| || || ||| Sbjct 420 GCAAGGGTACGCCCATCCTCTAGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGA 361 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | || | ||| || | || Sbjct 360 GGGATCCCCTCCTTGTCTTGAATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCA 301 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| ||||| || || ||||| || ||||| Sbjct 300 ACTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 251 >seq2804 Length=712 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GC 114213 ||| ||||| || | ||| || | ||| | || || ||||| |||||||||||||| || Sbjct 712 ACCACCACGAAGACGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGC 653 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | | ||| | ||| ||||| ||||| ||||| |||| || | ||||||||| || | Sbjct 652 T-AAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTG 594 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 ||||||| ||||| || |||||| ||| | | |||| ||| || | | |||| Sbjct 593 GAATGCCCTCTTTATCCTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGA 534 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | || || || || |||||||| ||||| || ||||| Sbjct 533 CCTCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || ||||| | |||||||| || || ||||||||||| Sbjct 486 ATCCCACCACGGAGACGGAGCACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCA 427 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| || |||||||| || || | ||||||||||| ||||| || Sbjct 426 GCAAGGGTACGGCCATCCTCTAGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGT 367 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298 || || ||||| ||||| |||||| Sbjct 366 GGGATCCCTTCCTTGTCTTGAATCTT 341 >seq56145 Length=1576 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || || | ||| | || | |||||||| || ||||| || ||||| Sbjct 522 TACCACCACGGAGCCTGAGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAG 581 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | ||| || ||||||||||||||||||||| |||| ||||||||||| || || | Sbjct 582 CAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTG 641 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || ||||| || || |||||| ||| | | |||| || || | || | Sbjct 642 GTATCCCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCA 701 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || || || || | ||| || |||||||||||||| Sbjct 702 CCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | ||||| ||||| || || || ||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | || || ||||| || || || |||| | |||||||| |||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||||| || | | || | ||||| | |||||| Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCA 928 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||||| ||||| || ||||| || || || |||||| Sbjct 929 ACCTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCATG 979 >seq56144 Length=1637 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || || | ||| | || | |||||||| || ||||| || ||||| Sbjct 522 TACCACCACGGAGCCTGAGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAG 581 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | ||| || ||||||||||||||||||||| |||| ||||||||||| || || | Sbjct 582 CAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTG 641 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || ||||| || || |||||| ||| | | |||| || || | || | Sbjct 642 GTATCCCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCA 701 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || || || || | ||| || |||||||||||||| Sbjct 702 CCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | ||||| ||||| || || || ||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | || || ||||| || || || |||| | |||||||| |||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||||| || | | || | ||||| | |||||| Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCA 928 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||||| ||||| || ||||| || || || |||||| Sbjct 929 ACCTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCATG 979 >seq56143 Length=1408 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || || | ||| | || | |||||||| || ||||| || ||||| Sbjct 522 TACCACCACGGAGCCTGAGAACAAGGTGAAGTGTAGATTCCTTCTGAATATTATAATCAG 581 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | ||| || ||||||||||||||||||||| |||| ||||||||||| || || | Sbjct 582 CAAGAGTGCGTCCATCTTCAAGTTGTTTACCAGCAAAGATAAGACGCTGTTGATCAGGTG 641 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 | || ||||| || || |||||| ||| | | |||| || || | || | Sbjct 642 GTATCCCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCCGAACTCTCCA 701 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | |||| || | || || || || | ||| || |||||||||||||| Sbjct 702 CCTCCAAAGTAATTGTCTTACCCGTTAAAGTCTTGACAAAAATCTGCAT 750 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | ||||| ||||| || || || ||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | || || ||||| || || || |||| | |||||||| |||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||||| || | | || | ||||| | |||||| Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCA 928 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||||| || || || ||||| || || || |||||| Sbjct 929 ACCTCCAGTGTGATGGTTTTTCCAGTTAGCGTTTTGACGAAGATTTGCATG 979 >seq48430 Length=787 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || || | ||| | ||| | |||||||| || || || ||||||||| Sbjct 204 ATTCCACCACGAAGCCTGAGAACAAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCG 145 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||||||||| || ||||| ||| | || | |||||| || |||||| Sbjct 144 GCCAAGGTGCGTCCATCTTCAAGCTGCTTACCGGCGAAAATCAAACGCTGCTGATCCGGA 85 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| |||||| || | | || | ||||||| || ||| Sbjct 84 GGGATACCTTCTTTGTCTTGAATCTTGGTCTTGACATTGTCGATGGTGTCGCTGCTCTCG 25 Query 114333 ACGTCCACGGTCACCGTTTTGCCG 114356 || || | ||| | ||||| ||| Sbjct 24 ACCTCGAGGGTGATGGTTTTCCCG 1 >seq2805 Length=580 Score = 102 bits (112), Expect = 7e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| ||| || | ||| | || |||||||| || |||||||||||| Sbjct 486 ATACCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCG 427 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| || ||||| ||||| ||||||| | |||||| || || Sbjct 426 GCCAAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGC 367 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298 || || ||||| ||||| |||||| Sbjct 366 GGGATCCCTTCCTTGTCTTGAATCTT 341 >seq34025 Length=456 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| ||| || | ||| | || |||||||| || |||||||||||| Sbjct 362 ATACCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCG 303 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | |||||| || ||||| ||||| |||| | | ||| || || || Sbjct 302 GCCAAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGT 243 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| || ||| || | | |||| |||||| | ||| Sbjct 242 GGGATTCCCTCCTTGTCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCT 183 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||||| ||| || || || |||||||| Sbjct 182 ACCTCTAAGGTAATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 133 >seq60038 Length=254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 114260 CTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGT 114319 ||| || ||||||||||| ||||||||||| ||||||| ||| | | || | ||| Sbjct 248 CTGCTGATCCGGAGGAATCCCTTCTTTGTCCTGAATCTTTGCTTTGACATTGTCGATGGT 189 Query 114320 GTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTG 114379 |||| | || || || || | ||| | || |||||||| || ||||| ||||| ||||| Sbjct 188 GTCGCTTGACTCCACCTCAAGGGTGATAGTCTTGCCGGTAAGGGTTTTCACAAAGATCTG 129 Query 114380 CAT 114382 ||| Sbjct 128 CAT 126 >seq53415 Length=940 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | ||| || ||||| | || || || Sbjct 351 GTTGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAACTGCTTCCCG 292 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || || |||||||| || || ||||| ||||| || Sbjct 291 GCGAAGATGAGACGCTGCTGATCTGGAGGAATCCCCTCCTTGTCTTGGATCTTGGTCTTG 232 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| || || || || | ||| | ||| || || || || ||| Sbjct 231 ACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTT 172 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 171 TTCACGAAGATCTGCAT 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419752116952308