Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq25475 125 1e-23 >seq25475 Length=2349 Score = 125 bits (138), Expect = 1e-23 Identities = 289/433 (67%), Gaps = 7/433 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || |||||||| |||||||| ||||| || ||| ||||| || ||| || |||||| Sbjct 1960 CTTGCCTTCTTTGCCGCCTCCGACGGAATCGTCTTGGAGAATCTCGCCGGAAGATTCATG 1901 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 ||||| | || || |||||||| ||||||||| |||||||| || || ||||| Sbjct 1900 AAAGAAATCCAAATCTCAGAGGCGCGTGCCTTCTACGGATTCCAGATCGCAATCGAGAAT 1841 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | || || ||| |||| | || ||| | |||| ||| ||| | | ||| Sbjct 1840 ATCCATTCAGAGATGTATTCTCTTCTCCTCGAGGCGTATATCAAAGATTCAGCAGAGAAG 1781 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | |||| | || || |||||||| || || || ||| |||||||| |||||| Sbjct 1780 AATCGTTTGTTTCACGCGATTGAGACGATTCCATGTATTGCGAAAAAGGCGGAATGGGCG 1721 Query 42663 CTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | || |||||||| | | | || |||| |||||| | ||||| ||| | | Sbjct 1720 ATGAAATGGATCGA---TTCGTCTGATACATTCGCTGAGAGGATTGTAGCATTTGCTTGC 1664 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782 || || || || || || || || ||| | || ||||||||||| | || | | Sbjct 1663 GTTGAAGGTATATTTTTTTCAGGTAGTTTCTGTGCGATTTTCTGGCTCAA--AAAACGCG 1606 Query 42783 --TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | ||||| ||| | || || || ||||| || || | ||||| || || ||| Sbjct 1605 GTTTAATGCCAGGATTAACTTTTTCAAACGAGCTTATTTCACGCGACGAAGGTCTTCATT 1546 Query 42841 GGGACTTTGCCTG 42853 | || || || || Sbjct 1545 GCGATTTCGCTTG 1533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943457907245840