Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq22702 174 1e-38 seq22701 140 3e-28 >seq22702 Length=2386 Score = 174 bits (192), Expect = 1e-38 Identities = 385/575 (67%), Gaps = 2/575 (0%) Strand=Plus/Plus Query 20182 ATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACC 20241 ||| |||| ||| | || ||||| || | || ||||| || || || ||| | Sbjct 623 ATGAGTTTGGTAAACATGTGCATCCCCAAGAACATGGATAAAATCACCTGGAACAAGTTC 682 Query 20242 AGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCC 20301 | || |||||||| ||| | || | ||||| ||| |||||||| || || || || Sbjct 683 ACAAATATGAGCAATCATGCATGTCAGGAGGGCATAAGATGCAATGTTGAATGGCACACC 742 Query 20302 CAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA 20361 || ||||| || | || | ||||| || ||||| || | ||| || | |||||||| Sbjct 743 CAGGCCCATATCAGCAGATCGCTGATTCATTTGACACGATAACTCCCCATTTGCTACATA 802 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 || || ||| ||||||||| ||||| |||||||| | || || || ||||| Sbjct 803 GAACTGCGCAGACATGTGACAGGGTGGAAGTGCCATCAATTTAAGATCTGCTGGATTCCA 862 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 ||| | | |||||| | |||||| | ||||||| ||||| | | || | | Sbjct 863 TGCAGAGAGAATGATCCGTCTATCATCAGGATTATGCTTTATCTTGTTGATAACATCTAA 922 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 | || |||| || ||||| ||||||||| || | || ||| || ||||| Sbjct 923 AAGCTGATCAACTCCTTGGCCAGTATAGTCATTATGCATGTTTGTATACCTGGCACCAAA 982 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCC 20601 |||||||||||| || || ||||||||||| || || |||||| || | | || | Sbjct 983 GTGCCTCCACTGAAACCCATAAACAGGTCCTAAGTCACCCTCCTCCCTCTCTGACAAATC 1042 Query 20602 GCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC-TGTTCTTG 20660 | | ||||| ||||| || |||| | ||||||||| | | || | ||| || Sbjct 1043 AATGCTATCAAGGAATTCCCTAGATGCATTATCGTCCCATATATGAATGCCTTTTTCCTG 1102 Query 20661 AAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTC 20720 || | || ||| | || || | | ||||||||| ||||||| || || || | Sbjct 1103 TAA-CACCATGGCATTTGTTGAGCCACTGATAAACCAAAGAAGCTCTTCAACAACCCCGC 1161 Query 20721 GCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAG 20755 ||||||| || | ||| || ||||| | |||||| Sbjct 1162 GCCAAAATACTCTCTTAGTTGTTAGAAGCGGAAAG 1196 >seq22701 Length=2303 Score = 140 bits (154), Expect = 3e-28 Identities = 357/541 (66%), Gaps = 2/541 (0%) Strand=Plus/Plus Query 20216 TGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAA 20275 || ||||| || || || ||| || ||||||||||| ||| | || ||||| | | Sbjct 574 TGGATAAAATCACCTGGAACAAGGTCACAAACATGAGCAATCATGCATGTCAAGAGCGCA 633 Query 20276 TAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGA 20335 || ||||| ||||| || || |||| |||||||| | || | ||||||| ||| Sbjct 634 TAAGATGCAATATTAAACGGCACACCCAGGCCCATGTCGGCAGATCGTTGATACATTTGA 693 Query 20336 CAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCC 20395 || || | ||| || | || ||||| || || |||| ||| || || ||||| ||| Sbjct 694 CACGATAACTCCCCATTTGCCACATAGAACTGTGCAAACATGTGGCATGGTGGAAGAGCC 753 Query 20396 ATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTA 20455 || || | || | || ||||| || | | ||||| | || ||| | |||||| Sbjct 754 ATTAATTTAAGATCAGATGGATTCCATGCTGAGAGGATGATGCGTCGATCATCGGGATTA 813 Query 20456 TTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCA 20515 | ||||| || | || | | | || ||||| || ||||| | ||||| || Sbjct 814 TGCTTTATCTTATTAATAACATCTAAAAGCTGATCAAATCCTTGGCCGGAGTAGTCCTCA 873 Query 20516 TCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAA 20575 | | || ||| || ||||||||||||||||| || || ||||||||||| || Sbjct 874 TGCATGTTAGTATACTTTGCACCAAAGTGCCTCCACTGAAACCCATAAACAGGTCCTAAG 933 Query 20576 TCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTG 20635 || |||||| || | || || | | ||| | || || || ||||| | Sbjct 934 TCACCCTCCTCCCTTTCTTTCAAACCAATGCTATCAAGGTATTCTCTCGATGCATTTCCG 993 Query 20636 TCCCATATCTTGACTCC-TGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAA 20694 |||||||| | | || | ||| || || | || ||| | || || | | ||| Sbjct 994 TCCCATATATGAATGCCTTTTTCCTGTAA-CACCATGGCATTTGTTGAGCCACTGATAAA 1052 Query 20695 CCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA 20754 |||||| ||||||| || || || |||||||| || | ||| || ||||| | ||||| Sbjct 1053 CCAAAGAAGCTCTTCAACAACCCCGCGCCAAAATACTCTCTTAGTTGTTAGAAGCGGAAA 1112 Query 20755 G 20755 | Sbjct 1113 G 1113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440960894351560