Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq17518 113 5e-20 seq17517 113 5e-20 seq25475 109 7e-19 seq46009 93.3 5e-14 seq9378 84.2 3e-11 seq9377 84.2 3e-11 >seq17518 Length=2997 Score = 113 bits (124), Expect = 5e-20 Identities = 602/946 (64%), Gaps = 27/946 (3%) Strand=Plus/Minus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 || ||||| || || |||||||| | ||||| | |||||||| || || || Sbjct 1618 GCAATTGATGCAAGGTTACACACGGCAGTCTCTGTTGGACTTGTGTACTCAATTATCTCA 1559 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT--TTGACTTTG-TGTTA 114586 || |||| ||||| |||||| ||||| ||| | |||| | ||| ||| | || Sbjct 1558 GTGCACAGGTTTGATGACTTAATTGTGCC-AAGAT--TTTGCTGGTTGCTTTTCCTATTG 1502 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 || |||||||| |||||||||| || | || || || | || ||||| | ||| || Sbjct 1501 CAAGCATCCTTAAAAAGCATGTAAGGATTTCCAGTTTCTATCTGTGACTTCAAAATTGCA 1442 Query 114647 TTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC--CTCCTCCTCGTACTTTG 114704 ||||| | ||| | ||| || ||| || ||| | || |||| | Sbjct 1441 AACCAGAGACTTTGTGCTTGAACAACCTTCTTTGCTTTTCCAGCTCTT--TCATACTGGG 1384 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 114762 |||| || ||| | ||||||||| || | |||| | || || |||| || || Sbjct 1383 TGTACAGATTCTCATATTCTTCACCCCAACAG--TCTGCCAAACCAGGGGCCTCATTGGG 1326 Query 114763 GCAGAAGAGAGACCATTGACCACC-CTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 ||| || || ||||| | |||| |||| ||| | | ||| || || || || | || Sbjct 1325 GCAAAACAGGGACCAATCACCATTGCTCCG-AACTCTTTCCATAAAAAGATCAGGCACCC 1267 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 | || || | || | ||| ||| || |||||| | || || || | ||||| Sbjct 1266 AAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCAACT 1207 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 |||| || || | | ||| || ||||| ||||||| ||| || || | | || || | Sbjct 1206 CCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTTTTC 1147 Query 114942 GA---CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | || |||| | ||||| | || ||| |||| || || || |||||||||| Sbjct 1146 TCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTGGAA 1087 Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATC 115056 ||||||||| ||| |||||||| || |||| || | | ||| || || | | Sbjct 1086 TGATACCATTAGACGTCCCATTTGTTCCACGAATGTAGCTGCCATAT--GCCCTTATGTT 1029 Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 ||| | | |||||| || || || | || || |||||||| | | | Sbjct 1028 ATGAACAGAAACACCAATCCCTCCAGCAGATTTACTAATGACAGCGCACTCTTTCAATGT 969 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | || ||||| || || ||| | || | || | |||||| || || || Sbjct 968 ATCATAAATCCCTTCAATACTATCATCTTTCATACATATCAAGAAGCAACTACTCAACTG 909 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236 ||||| || || || || ||||| || ||||| | || || ||||| | || || Sbjct 908 AGGCCTAGGAGTCCCGGCATTGAAAAGAGTTGGAGAAGCATGAGTGAACCATCTCTGAGA 849 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 |||| || || |||| | ||| ||| || | | |||||| || | || || Sbjct 848 CATCAAATGATAAGTCTTAACAGCGGATTCAATATCATGCTTGTGAATCCCAACAGAAAC 789 Query 115297 CCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAA 115354 || ||| | ||| | ||| || |||| || ||| | ||||| | || || ||| Sbjct 788 CCTCATTATCATATGTTGAGGCCTTTCAACAACAG--TCCCATCAACTTTCAACAGATAA 731 Query 115355 CTCTTCTCCAAGGTCTTGAGACCAAAATAACCAAAGTCATAGTCCC 115400 | |||| | ||| |||| ||||| ||| || ||||| | |||| Sbjct 730 GACCTCTCAAGGGTTTTGAATCCAAAGTAATCATAGTCAAAATCCC 685 >seq17517 Length=2996 Score = 113 bits (124), Expect = 5e-20 Identities = 602/946 (64%), Gaps = 27/946 (3%) Strand=Plus/Minus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 || ||||| || || |||||||| | ||||| | |||||||| || || || Sbjct 1617 GCAATTGATGCAAGGTTACACACGGCAGTCTCTGTTGGACTTGTGTACTCAATTATCTCA 1558 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT--TTGACTTTG-TGTTA 114586 || |||| ||||| |||||| ||||| ||| | |||| | ||| ||| | || Sbjct 1557 GTGCACAGGTTTGATGACTTAATTGTGCC-AAGAT--TTTGCTGGTTGCTTTTCCTATTG 1501 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 || |||||||| |||||||||| || | || || || | || ||||| | ||| || Sbjct 1500 CAAGCATCCTTAAAAAGCATGTAAGGATTTCCAGTTTCTATCTGTGACTTCAAAATTGCA 1441 Query 114647 TTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC--CTCCTCCTCGTACTTTG 114704 ||||| | ||| | ||| || ||| || ||| | || |||| | Sbjct 1440 AACCAGAGACTTTGTGCTTGAACAACCTTCTTTGCTTTTCCAGCTCTT--TCATACTGGG 1383 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCC--ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 114762 |||| || ||| | ||||||||| || | |||| | || || |||| || || Sbjct 1382 TGTACAGATTCTCATATTCTTCACCCCAACAG--TCTGCCAAACCAGGGGCCTCATTGGG 1325 Query 114763 GCAGAAGAGAGACCATTGACCACC-CTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 ||| || || ||||| | |||| |||| ||| | | ||| || || || || | || Sbjct 1324 GCAAAACAGGGACCAATCACCATTGCTCCG-AACTCTTTCCATAAAAAGATCAGGCACCC 1266 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 | || || | || | ||| ||| || |||||| | || || || | ||||| Sbjct 1265 AAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCAACT 1206 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 |||| || || | | ||| || ||||| ||||||| ||| || || | | || || | Sbjct 1205 CCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTTTTC 1146 Query 114942 GA---CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | || |||| | ||||| | || ||| |||| || || || |||||||||| Sbjct 1145 TCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTGGAA 1086 Query 114999 TGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATC 115056 ||||||||| ||| |||||||| || |||| || | | ||| || || | | Sbjct 1085 TGATACCATTAGACGTCCCATTTGTTCCACGAATGTAGCTGCCATAT--GCCCTTATGTT 1028 Query 115057 ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 ||| | | |||||| || || || | || || |||||||| | | | Sbjct 1027 ATGAACAGAAACACCAATCCCTCCAGCAGATTTACTAATGACAGCGCACTCTTTCAATGT 968 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | || ||||| || || ||| | || | || | |||||| || || || Sbjct 967 ATCATAAATCCCTTCAATACTATCATCTTTCATACATATCAAGAAGCAACTACTCAACTG 908 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236 ||||| || || || || ||||| || ||||| | || || ||||| | || || Sbjct 907 AGGCCTAGGAGTCCCGGCATTGAAAAGAGTTGGAGAAGCATGAGTGAACCATCTCTGAGA 848 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 |||| || || |||| | ||| ||| || | | |||||| || | || || Sbjct 847 CATCAAATGATAAGTCTTAACAGCGGATTCAATATCATGCTTGTGAATCCCAACAGAAAC 788 Query 115297 CCGCATAAACATGTATTGGGGTGTTTC--CATCAGGATACCATCGAGCCTCTGGAGGTAA 115354 || ||| | ||| | ||| || |||| || ||| | ||||| | || || ||| Sbjct 787 CCTCATTATCATATGTTGAGGCCTTTCAACAACAG--TCCCATCAACTTTCAACAGATAA 730 Query 115355 CTCTTCTCCAAGGTCTTGAGACCAAAATAACCAAAGTCATAGTCCC 115400 | |||| | ||| |||| ||||| ||| || ||||| | |||| Sbjct 729 GACCTCTCAAGGGTTTTGAATCCAAAGTAATCATAGTCAAAATCCC 684 >seq25475 Length=2349 Score = 109 bits (120), Expect = 7e-19 Identities = 181/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || ||||| ||||| || || || || || || || || | ||||||||| | ||| Sbjct 1548 TGAAGACCTTCGTCGCGTGAAATAAGCTCGTTTGAAAAAGTTAATCCTGGCATTAAACCG 1607 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || || || | ||||||||||||||| || ||| || || || || || || || || Sbjct 1608 CGTTTTTTGAGCCAGAAAATCGCACAGAAACTACCTGAAAAAAATATACCTTCAACGCAA 1667 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || | | | |||||| || | ||| | || | ||| ||||||||| Sbjct 1668 GCAAATGCTACAATCCTCTCAGCGAATGTATCAGAC---GAATCGATCCATTTCATCGCC 1724 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 126298 || | |||||||||| | ||||| || | |||| ||||| | ||| | ||||| Sbjct 1725 CATTCCGCCTTTTTCGCAATACATGGAATCGTCTCAATCGCGTGAAACAAACGATTCTTC 1784 Query 126299 TCTGATGGATCTTTGATGTAC 126319 |||| || ||||||||| ||| Sbjct 1785 TCTGCTGAATCTTTGATATAC 1805 >seq46009 Length=1074 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| ||||||||||| | ||||| |||||||| ||||| ||| ||| Sbjct 590 GCAAAATCACAGTGAAGACCCTCGTCTCTAGAGATTAGTTCATTTGAGAATGTCAGACCT 531 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || || | ||| || | |||||| || ||||| || || ||||| || || Sbjct 530 GGCATTAGTCCTCTCTTTTTAAGCCAGAATATGGCACAGAAGCTTCCTGAGAAAAATATC 471 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 || || ||||| || || ||| || | ||| ||||| || Sbjct 470 CCTTCAACACATGCAAAACCAACAAGCCTCTCCGCAAATGA 430 >seq9378 Length=3911 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 172811 GGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTC 172870 || |||||||| ||||| || ||||| ||||||||||| ||||| | || |||| ||| Sbjct 2428 GGAAACACACCATAGTGGTCTCGACCCACCACAGAAAGCCCAGCCATAGCAAGGGCCTTG 2487 Query 172871 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGA 172911 || ||||| ||||| |||| || | ||||| ||| |||| Sbjct 2488 GCAGAATCTCCCTCTGTCAATATCAAAGTACATTTTTCAGA 2528 >seq9377 Length=3936 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 172811 GGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTC 172870 || |||||||| ||||| || ||||| ||||||||||| ||||| | || |||| ||| Sbjct 2453 GGAAACACACCATAGTGGTCTCGACCCACCACAGAAAGCCCAGCCATAGCAAGGGCCTTG 2512 Query 172871 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGA 172911 || ||||| ||||| |||| || | ||||| ||| |||| Sbjct 2513 GCAGAATCTCCCTCTGTCAATATCAAAGTACATTTTTCAGA 2553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596796127219720