Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq34025 118 8e-22 seq33732 118 8e-22 seq56144 109 4e-19 seq2805 109 4e-19 seq2804 104 2e-17 seq2803 102 6e-17 seq2802 98.7 7e-16 seq56145 86.0 4e-12 seq56143 86.0 4e-12 seq2801 82.4 5e-11 >seq34025 Length=456 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || | ||| ||||| || ||||| || |||||||||||| Sbjct 359 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 300 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| | ||||||||||| | ||||| | ||| || || ||| Sbjct 299 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 240 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| ||||| || || | || || || || | ||||||| Sbjct 239 ATTCCCTCCTTGTCTTGTATTTTTGCCTTCACGTTATCAATGGTGTCTGAACTTTCTACC 180 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||||||||||| || || |||| ||| || || || || |||||| Sbjct 179 TCTAAGGTAATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCATA 132 >seq33732 Length=802 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || | ||| ||||| || ||||| || |||||||||||| Sbjct 705 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 646 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| | ||||||||||| | || | | ||||||||| |||| Sbjct 645 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCCGGTGGA 586 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| || ||| || ||| | ||||| || || | | || || Sbjct 585 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCTGAACTCTCCACC 526 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| |||||||| || ||||| || ||||| ||||| ||||||||| Sbjct 525 TCTAGTGTAATGGTCTTTCCTGTAAGGGTTTTGACAAAGATTTGCATA 478 Score = 100 bits (110), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||||||||||||| || || || || ||||||||||| || | | | | || ||| Sbjct 459 ACTAAATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCT 400 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || ||||| | || | |||||| || || || || || |||||||| | Sbjct 399 AGTTGCTTACCAGCAAAAATGAGACGCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGA 340 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | ||||| ||||| | | || || || | || ||||| || Sbjct 339 ATCTTGGACTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTG 280 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAA 15184 || ||||| || || ||||| |||||||| |||||| Sbjct 279 CCAGTCAGGGTCTTCACAAAGATTTGCAT-CTTGAAA 244 >seq56144 Length=1637 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || ||||||||||| ||| || ||| ||||||| || ||| Sbjct 1004 TGGAGCGTTGATTCCTTCTGTATGTTGTAGTCGGCTAGGGTTCGGCCGTCTTCCAACTGT 1063 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | ||||| ||||| || ||| |||||||| |||||||| ||| || Sbjct 1064 TTTCCGGCAAAGATCAACCGCTGCTGATCGGGAGGAATTCCCTCCTTGTCTTGAATCTTA 1123 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || | || || || ||| ||| || |||| ||| ||||||||||| || Sbjct 1124 GCTTTCACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTATGGTTTTACCGGTT 1183 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| ||||| |||||||| Sbjct 1184 AGGGTTTTCACAAAGATTTGCAT 1206 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||| || ||||| ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||| || || || | ||||| |||||||| || ||||||||||| ||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || || || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq2805 Length=580 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || || || | ||| ||||| || ||||| || |||||||||||| Sbjct 483 CCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCGGCC 424 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| | ||||||||||| | || | | |||||| ||| || Sbjct 423 AAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGCGGG 364 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| ||| || ||| | ||||| ||||| | | || || Sbjct 363 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 304 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || ||||| || || || || || || || ||||||||||| || Sbjct 303 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 >seq2804 Length=712 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || ||||| || || |||||||||||||| || | | | || ||| Sbjct 465 ACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCAGCAAGGGTACGGCCATCCTCT 406 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||||||||| || | || | |||||| ||||| ||| || ||||||||||| | Sbjct 405 AGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGTGGGATCCCTTCCTTGTCTTGA 346 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | ||||| ||||| | | || || || | || ||||| || Sbjct 345 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 286 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || || || || ||||||||||| || Sbjct 285 CCAGTGAGGGTCTTAACGAAAATTTGCATCTT 254 Score = 102 bits (112), Expect = 6e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTC 15023 || || | ||| || || || ||||| || ||||||||||| ||| | | |||| | || Sbjct 696 AACACAAGATGGAGAGTTGACTCTTTCTGAATGTTGTAATCTGCTAA-AGTTCTGCCATC 638 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 || | ||||||||||| | || | | |||||||||| |||||| || || || || Sbjct 637 CTCAAGCTGTTTGCCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATC 578 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 ||| ||| ||| ||| | || || ||||| | || || || | ||| ||||| Sbjct 577 CTGAATCTTGGCTTTGACATTGTCAATGGTATCAGAGCTCTCGACCTCAAGGGTGATGGT 518 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| |||||||| Sbjct 517 CTTTCCAGTGAGAGTTTTCACAAAGATTTGCAT 485 >seq2803 Length=533 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| |||| | | ||| | ||| || ||||| || || ||||| || ||||| Sbjct 194 GCCACCACGCAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGC 253 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 ||| | | | || || ||||| || ||||| | || | | ||| ||||| || Sbjct 254 CAGAGTACGACCATCCTCCAATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGG 313 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||| || ||||| |||||| | || ||| | || || ||||| | ||||||| Sbjct 314 AATTCCCTCTTTGTCCTGAATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTAC 373 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || || || || ||||||||||||||| Sbjct 374 CTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCATA 422 >seq2802 Length=1024 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| || | | | ||| | ||| || ||||| || || ||||| || ||||| Sbjct 685 GCCACCGCGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGC 744 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 ||| | | | || || ||||| || ||||| | || | | ||| ||||| || Sbjct 745 CAGAGTACGACCATCCTCCAATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGG 804 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 |||||| || ||||| |||||| | || ||| | || || ||||| | ||||||| Sbjct 805 AATTCCCTCTTTGTCCTGAATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTAC 864 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || || || || ||||||||||||||| Sbjct 865 CTCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCATA 913 >seq56145 Length=1576 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||| || ||||| ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||| || || || | ||||| |||||||| || ||||||||||| ||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || || || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||||||| Sbjct 949 TCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq56143 Length=1408 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||| || ||||| ||||| || || || ||||| ||| ||||| |||| || Sbjct 769 AACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCGTCCTC 828 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||| || || || | ||||| |||||||| || ||||||||||| ||||| Sbjct 829 CAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGAGGAATTCCTTCTTTGTCCTG 888 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || || || | || || || || ||| || || | || |||||||| Sbjct 889 GATCTTCGCCTTCACGTTGTCGATTGTGTCCGAGGATTCAACCTCCAGTGTGATGGTTTT 948 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || |||||||| Sbjct 949 TCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 >seq2801 Length=469 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||| | || | ||||| || || || || || ||||||||||| Sbjct 299 CCACCTCTCAATCGGAGTACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 240 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| |||||||| ||||| | || | | || || || ||| Sbjct 239 AGGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGA 180 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||||| ||| || | ||||| ||||| | | || || Sbjct 179 ATACCTTCCTTATCTTGGATTTTAGATTTCACGTTGTCTATGGTATCAGAACTCTCCACC 120 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || || ||||| || |||| ||||| ||||| |||||||| || Sbjct 119 TCAAGAGTGATAGTTTTGCCGGTCAATGTTTTCACAAAGATTTGCATCTT 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357066806673815