Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq56144 125 6e-24 seq2801 116 3e-21 seq48696 114 1e-20 seq53415 104 2e-17 seq56145 98.7 9e-16 seq2805 96.9 3e-15 seq56143 95.1 1e-14 seq2804 93.3 4e-14 seq2802 86.0 6e-12 seq2803 84.2 2e-11 seq60039 82.4 7e-11 >seq56144 Length=1637 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || || || |||||||||||||| || || || || ||| Sbjct 977 ATGCCGCCGCGGAGACGGAGTACCAGGTGGAGCGTTGATTCCTTCTGTATGTTGTAGTCG 1036 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| || ||||| |||||||| || | ||||| || ||||| || || Sbjct 1037 GCTAGGGTTCGGCCGTCTTCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGATCGGGA 1096 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || || || |||||||| || ||| | || | || | ||||||||| || || Sbjct 1097 GGAATTCCCTCCTTGTCTTGAATCTTAGCTTTCA-CGTTGTCGATGGTGTCGGAGGATTC 1155 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| |||||||| ||||| ||||| |||||||| Sbjct 1156 AACCTCTAGGGTTATGGTTTTACCGGTTAGGGTTTTCACAAAGATTTGCAT 1206 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || | ||| || || || || || |||||||||||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || |||| ||| ||||| || | |||||||| || || ||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| |||||||| || || || || || | || | || | ||||| || || || Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCCGAGGATTC 927 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| |||||||| ||||| || || |||||||| Sbjct 928 AACCTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq2801 Length=469 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || |||||||| ||||| || ||||| | ||| | ||| ||| Sbjct 281 ACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGACCATCTTCC 222 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 |||||||| || || | || | | |||||| || || ||||| ||||| |||||||| Sbjct 221 AATTGTTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGAGGAATACCTTCCTTATCTTGG 162 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||| ||| | || | |||| ||| || ||| ||| || || ||||| | ||||| Sbjct 161 ATTTTAGATTTCA-CGTTGTCTATGGTATCAGAACTCTCCACCTCAAGAGTGATAGTTTT 103 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||||| | ||||| ||||| ||||||||| Sbjct 102 GCCGGTCAATGTTTTCACAAAGATTTGCATC 72 >seq48696 Length=1151 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | | || ||||| || ||||||||||| ||||| || || || Sbjct 306 ATACCTCCACGGAGACGGAGGACAAGATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCA 247 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || || | |||||||| ||| | |||| ||||||||||| || Sbjct 246 GCAAGAGTACGACCGTCCTCAAGCTGTTTTCCGGCGAAGATCAGACGTTGCTGGTCAGGG 187 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || || || || |||| || | || | |||||| ||| ||| Sbjct 186 GGAATTCCTTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTC 128 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| |||||||| | || || ||||| || ||||| || || ||||||||| Sbjct 127 GACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTTTTAACGAATATTTGCATC 76 >seq53415 Length=940 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || ||||| || ||||| ||||| ||||| || || ||| | Sbjct 381 CCACCGCGGAGACGGAGGACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCG 322 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || ||||| || || || ||| | || | || ||||| || || ||| Sbjct 321 AGAGTGCGGCCGTCTTCCAACTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGAGGA 262 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || ||||| || || |||| || | || | ||||||||||||||| || Sbjct 261 ATCCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTTGTCGATGGTGTCGGAAGACTCAAC 203 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || | ||| || || ||||| ||||| || || || |||||| Sbjct 202 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 154 >seq56145 Length=1576 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || | ||| || || || || || |||||||||||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || |||| ||| ||||| || | |||||||| || || ||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| |||||||| || || || || || | || | || | ||||| || || || Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCCGAGGATTC 927 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| |||||||| ||||| || || |||||||| Sbjct 928 AACCTCCAGTGTGATGGTTTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 978 >seq2805 Length=580 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | |||||| ||||| || || ||||| || ||||| || |||||| Sbjct 486 ATACCACCACGAAGTCGCAACACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAATCG 427 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | ||||| || || | || | | || || || ||| Sbjct 426 GCCAAAGTTCTGCCATCTTCGAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGATCGGGC 367 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || || | |||| ||| || ||| ||| Sbjct 366 GGGATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCA 307 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || || || || || |||||||||||| Sbjct 306 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATC 256 >seq56143 Length=1408 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | | || | ||| || || || || || |||||||||||||| Sbjct 749 ATCCCTCCACGCAGGCGAAGAACCAAATGGAGAGTAGACTCTTTCTGGATATTATAATCC 808 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || |||| ||| ||||| || | |||||||| || || ||||| Sbjct 809 GCAAGAGTTCTCCCGTCCTCCAGTTGCTTTCCCGCAAAGATCAATCGCTGTTGATCCGGA 868 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| |||||||| || || || || || | || | || | ||||| || || || Sbjct 869 GGAATTCCTTCTTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCCGAGGATTC 927 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || ||||| ||||| || || |||||||| Sbjct 928 AACCTCCAGTGTGATGGTTTTTCCAGTTAGCGTTTTGACGAAGATTTGCAT 978 >seq2804 Length=712 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || |||||||| || || || ||||| Sbjct 486 ATCCCACCACGGAGACGGAGCACCAAATGGAGTGTAGATTCCTTCTGTATGTTGTAATCA 427 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | |||||| || || | || | || |||||||| || Sbjct 426 GCAAGGGTACGGCCATCCTCTAGTTGTTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGT 367 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || || | |||| ||| || ||| ||| Sbjct 366 GGGATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCA 307 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || || || || || |||||||||||| Sbjct 306 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATC 256 >seq2802 Length=1024 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || ||||| || | | || |||||||| || |||||||| || ||||||||||| Sbjct 686 CCACCGCGAAGACGAAGAACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGCC 745 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| |||||||| || || || | || | | |||||||| || ||| Sbjct 746 AGAGTACGACCATCCTCCAATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGGA 805 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || ||||| || |||||||| || | || | || || ||| || || Sbjct 806 ATTCCCTCTTTGTCCTGAATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTACC 865 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| | || || ||||| || || || |||||||||||||| Sbjct 866 TCCAAAGTTATGGTCTTTCCGGTAAGGGTCTTGACAAAAATTTGCAT 912 >seq2803 Length=533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || |||||||| || |||||||| || ||||||||||| | || | ||| ||| Sbjct 213 ACAAGATGCAGAGTAGATTCCTTCTGTATATTATAATCAGCCAGAGTACGACCATCCTCC 272 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| || || || | || | | |||||||| || ||||| || ||||| || ||| Sbjct 273 AATTGCTTACCAGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATTCCCTCTTTGTCCTGA 332 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| || | || | || || ||| || || || | ||| | || || Sbjct 333 ATTTTAGTCTTCACATTATCAATTGTATCAGAACTTTCTACCTCCAAAGTTATGGTCTTT 392 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || |||||||||||||| Sbjct 393 CCGGTAAGGGTCTTGACAAAAATTTGCAT 421 >seq60039 Length=228 Score = 82.4 bits (90), Expect = 7e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || |||||||| |||||||||||||| | |||| ||| || Sbjct 143 ACGAGATGAAGGGTGGATTCCTTCTGGATATTATAATCAGCCAAGGTTCGTCCATCTTCG 84 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||||||||| || | ||||| | ||||||||| || ||||| || || ||||| || Sbjct 83 AGTTGTTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATACCCTCCTTATCCTGT 24 Query 45252 ATTTT 45256 || || Sbjct 23 ATCTT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451581373663640