Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq63568 614 7e-171 seq65592 143 3e-29 seq67767 127 3e-24 seq47049 125 9e-24 seq56135 82.4 9e-11 >seq63568 Length=1222 Score = 614 bits (680), Expect = 7e-171 Identities = 730/987 (74%), Gaps = 2/987 (0%) Strand=Plus/Plus Query 7535 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGA 7594 ||||| ||||| |||||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 7595 CCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATG 7654 ||||||||| | | || |||||||| || | ||||||||||||| ||||| | Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 7655 GACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTG 7714 || ||||| || |||||||| || | ||||| ||||| ||||| | ||| | || || Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 7715 AACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTG 7774 |||||||| || || || ||||| || || |||||||| || | || || || |||||| Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 7775 AACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAG 7834 || ||| ||||||||||||| || ||||| || ||||||||||| || || || ||| Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 7835 GTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCA 7894 || ||||| ||||||||||| | ||||| | || || ||| || |||||||| Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 7895 CGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAG 7954 | | || | ||| ||||| | ||||| ||||| |||||||| || || || || || Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 7955 ACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAG 8014 |||||||| || || | |||||| || |||||||| || || || ||||| || || || Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 8015 ACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCT 8074 |||| ||| ||||||| ||||||||||| || ||||||||| | || || || ||| Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCT 637 Query 8075 TGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCT 8134 ||||| | || |||| | ||| || |||| || || || || ||||| || ||||| Sbjct 638 TGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCA 697 Query 8135 ACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTAT 8194 ||| ||||| || |||||||| ||||| || |||||||||||||||||||||||| Sbjct 698 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 757 Query 8195 GCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGC 8254 | | ||| | | |||||| | | || |||| |||||||||| ||||| | | Sbjct 758 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAAC 817 Query 8255 CACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAA 8314 || ||||||| || || |||||||| || || || ||||| | ||| ||||| |||| Sbjct 818 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 877 Query 8315 GAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGT 8374 | ||||| || |||||||| || || ||||| || || | || || |||| || || Sbjct 878 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 937 Query 8375 TCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAAT 8433 ||||| || || ||||| || || ||||| ||||| | |||||||| || || ||| | Sbjct 938 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA- 996 Query 8434 AGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATT 8493 || || | | | ||||| ||||||| ||||| ||||| || | || ||||| || Sbjct 997 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 1056 Query 8494 GTTGGTGGAGGTTACCCAGTTACAGAA 8520 | ||| ||||| |||||||||||| Sbjct 1057 TTCAGTGCTGGTTATCCAGTTACAGAA 1083 >seq65592 Length=292 Score = 143 bits (158), Expect = 3e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || ||||||||| || ||||| Sbjct 211 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 152 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || || || || || ||||| ||||| ||| Sbjct 151 TGAGCCGCCATCCACGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTC 92 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| || ||||| | ||| ||||| |||||||||||||| || | ||| Sbjct 91 TCAAATTCAGGATCTTCTGCTGCGCGGATTTCTTGAGAAACAAAGTCATAGGCACGCAGG 32 Query 6443 TTAAGTGCAAGACC 6456 || || || ||||| Sbjct 31 TTCAGGGCCAGACC 18 >seq67767 Length=213 Score = 127 bits (140), Expect = 3e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 6810 CAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAA 6869 |||||||||||| ||||| || || ||||| || || |||||||| ||||| ||||||| Sbjct 213 CAAAGAACCAACCAGACTGGCCCAGTGGATAAATCAGGAAGACAGAAACAAAAACAGCAA 154 Query 6870 TGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCA 6928 | ||||| || || ||||||||||| || || || | | || ||| || || | ||| Sbjct 153 TTGGACCGGAGAATGCGATTGCATTATAAGGCCGCA-ATTGAACAGATCGAGCAAGTTCA 95 Query 6929 AACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGGCCAT 6988 || || || | ||| |||||||| | | || || ||||| || || ||||||| ||| Sbjct 94 AATTGACGTAACATAAAACCTATTAATCCGAAAGCACCGTGAAGAGCAACAAAAGTCCAC 35 Query 6989 AGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTC 7022 || || || | ||| ||| ||| ||||||| Sbjct 34 AGACCACCTAATTGACACCAACGGGTAAAATCTC 1 >seq47049 Length=776 Score = 125 bits (138), Expect = 9e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269 ||||| || || |||| | |||||| ||| ||| | | ||||||| |||||| || Sbjct 250 AGTTCTTCTTCCTTGTGAGTCTCAATAACAACATCAGACTTAGGATAAGCAACACAAGTA 309 Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329 |||| |||||| | || |||||||||||||||||||| || ||| |||||| || Sbjct 310 AGAACAAAACCACCTTCAATCTGGTCATCATCAAGGAAAGAACCATCAGATTGATCAACT 369 Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389 ||| | | ||| || ||||| ||||| | |||||||| ||| ||||| | Sbjct 370 TCACCACCAACAACTTTACCAGCACATGAAGAACAAGAACCAGCTCTGCATGAGTAAGGG 429 Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACACTCAAA 10448 || ||||| || ||||||||||| || |||||||| ||| || | ||| ||||| Sbjct 430 AGATCAATTCCAACTTCTTCAGCATGGTCAAGAATGTAAACATCATCTGGACATTCAAA 488 >seq56135 Length=966 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262 ||||||||||||| | || |||| | | | | |||||||| || ||||| ||||| Sbjct 601 TCAGTAAAGTTCACCTTCCTTGTGAGTTTGGATAACACAATCAGCAGTTGGATATGAAAC 542 Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322 |||||| || | || || | | | || ||| || | ||| || ||| ||| Sbjct 541 ACAGGTAAGCACAAAGCCTTCCTTAAGTTGAGTATCGTCCAAGAAAGAGCCATCAGATTG 482 Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382 ||| || | || || | | || || |||||| | || || || ||||| |||||||| Sbjct 481 ATCGACTGAGCCAGAAACAACCTTTCCAGCACAAGTAGAGCACGCTCCAGCACGGCACGA 422 Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 ||| ||| |||| ||||| | || || ||||| || ||||| Sbjct 421 GTAAGGGAGTTCAACCCCTGCATTCTCCGCTGCATCTAGGATGTA 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621544209806960