Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq25475 98.7 2e-15 >seq25475 Length=2349 Score = 98.7 bits (108), Expect = 2e-15 Identities = 343/529 (65%), Gaps = 26/529 (5%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| |||||||||||||| |||| | || || ||||| | | || || || Sbjct 1262 CTTCTCAAAAAAGTTGGTCTTCCCCTGAAGCGAAATCAGATCCATCCAATCAAACGGATT 1321 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | |||| | ||| |||| | | || || || ||| |||||| || || ||| | || Sbjct 1322 CGTCACATTATAAATCTTCCCACACCCAAGCTCCCCCAACAACCTATCAGCAACATACTC 1381 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA--GCCTAACGGGGAGCGCTTCC 159826 || || ||| |||| |||| ||| ||||| | || || || || ||||| || Sbjct 1382 AATATACGTACTCATCAAATCACCGTTCATCCCAACCAACGCGCAA--GGAAGCGCGTCG 1439 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGT-A 159885 ||| ||||||| |||| ||||| ||||| || ||||||| | || || || | | Sbjct 1440 CACACAAACTCCCTCTCGATCTCAACCGCGTCACGCACAATCGTCTGCACGCGCTCTTCA 1499 Query 159886 CCCCG--GCTTGCCCAA-AATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAG 159942 | | ||| || |||| | ||| || | || || || ||||| || || Sbjct 1500 CTGAGTTTCTTTTTTAATAATGAG-----TAA--AGCAAACAAGCGAAATCGCAATGAAG 1552 Query 159943 TCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGG 160002 || ||||| || || || | |||||| || | | | || ||||| | || || Sbjct 1553 ACCTTCGTCGCGTGAAATAAGCTCGTTTGAAAAAGTTAATCCTGGCATTAAACCGCGTTT 1612 Query 160003 TTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 ||||||||| ||||| || ||| ||| |||||| || || || ||| ||||| Sbjct 1613 TTTGAGCCAGAAAATCGCACAGAAACTACCTGAAAAAAATATACCTTCAACGCAAGCAAA 1672 Query 160063 CGCCACGAGCCTCTCACCAAAAG----AGGCGTTGGTGTCATGGGTCCACCTTTTGGCCC 160118 || || | ||||||| | || | || || || | |||| | | |||| Sbjct 1673 TGCTACAATCCTCTCAGCGAATGTATCAGACG-------AATCGATCCATTTCATCGCCC 1725 Query 160119 ATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAA 160167 |||| ||||| || || || || || || ||| | |||| |||||| Sbjct 1726 ATTCCGCCTTTTTCGCAATACATGGAATCGTCTCAATCGCGTGAAACAA 1774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794413131349040