Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17518 147 3e-30 seq17517 147 3e-30 seq9379 91.5 2e-13 seq9378 91.5 2e-13 seq9377 91.5 2e-13 seq9376 91.5 2e-13 >seq17518 Length=2997 Score = 147 bits (162), Expect = 3e-30 Identities = 609/949 (64%), Gaps = 25/949 (3%) Strand=Plus/Minus Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG-GTGTATTCCAAAATTTC 110345 ||||| || ||||| || ||||| | |||||| | || | | ||||| || | || || Sbjct 1618 GCAATTGATGCAAGGTTACACACGGCAGTCTC-TGTTGGACTTGTGTACTCAATTATCTC 1560 Query 110346 CGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCA 110405 || |||| ||| || |||||| || | || | ||| || ||| ||||| Sbjct 1559 AGTGCACAGGTTTGATGACTTAATTGTGCCAAGATTTTGCTGGTTGCTTTTCCTATTGCA 1500 Query 110406 TGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTT 110465 ||||||||| | |||||||| || | |||||||| |||||||||| | ||| || Sbjct 1499 AGCATCCTTAAAAAGCATGTAAGGATTTCCAGTTTCTATCTGTGACTTCAAAATTGCAAA 1440 Query 110466 CCATACATCGGCGGCGGGGACAG------TTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | | || | ||| |||| || | || ||| || |||| Sbjct 1439 CCAGAGACTTTGTGCTTGAACAACCTTCTTTGCTTTTCC-AGCTCTT-----TCATACTG 1386 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGACCCTTCGCCTTGTCGG 110578 |||||||| | |||| |||| | || | ||| || | | ||| |||| | || Sbjct 1385 GGTGTACAGATTCTCATATTCTTCACCCCA-ACAGTCTGCCAAACCAGGGGCCTCATTGG 1327 Query 110579 GACAGAAGAGGGACCAATTTCCACC-CTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 | || || |||||||||| ||| |||| ||| || | ||| || || ||||| | | Sbjct 1326 GGCAAAACAGGGACCAATCACCATTGCTCCG-AACTCTTTCCATAAAAAGATCAGGCACC 1268 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || | || | || || ||| ||||| | || ||||| | | | Sbjct 1267 CAAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCAAC 1208 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 ||||| || || | | ||| | ||||||||||| | || ||||| | | || || Sbjct 1207 TCCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTTTT 1148 Query 110758 C---GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 | | || |||| | |||||| || || ||| ||||||| || | ||||| ||| Sbjct 1147 CTCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTGGA 1088 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTG--GACTTATTGGCACGAATGT 110872 || || |||| || |||||||| || | ||| | | | ||| || | |||| Sbjct 1087 ATGATACCATTAGACGTCCCATTTGTTCCACGAATGTAGCTGCCATAT--GCCCTTATGT 1030 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 || | | | |||||| || || || | |||||||| || |||||| | | || Sbjct 1029 TATGAACAGAAACACCAATCCCTCCAGCAGATTTACTAATGACAGCGCACTCTTTCAATG 970 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 || ||||||| || ||||| ||| | || | || | |||||| | || || Sbjct 969 TATCATAAATCCCTTCAATACTATCATCTTTCATACATATCAAGAAGCAACTACTCAACT 910 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGG 111052 |||| | ||| || || |||||||| || || || | |||||| ||||| | || | Sbjct 909 GAGGCCTAGGAGTCCCGGCATTGAAAAGAGTTGGAGAAGCATGAGTGAACCATCTCTGAG 850 Query 111053 ACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAA 111112 ||||| | || || | | ||||| | ||| | |||||| |||| | || Sbjct 849 ACATCAAATGATAAGTCTTAACAGCGGATTCAATATCATGCTTGTGAATCCCAACAGAAA 790 Query 111113 CTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAAC 111172 | | ||| | ||||| ||||||| |||| | | | |||||||| | || ||| Sbjct 789 CCCTCATTATCATATGTTGAGGCCTTTCAACAACAGTCCCATCAACTTTCAACAGATAAG 730 Query 111173 TCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 | |||| ||||| |||| |||||||| || | || ||||| || || Sbjct 729 ACCTCTCAAGGGTTTTGAATCCAAAGTAATCATAGTCAAAATCCCGGTC 681 >seq17517 Length=2996 Score = 147 bits (162), Expect = 3e-30 Identities = 609/949 (64%), Gaps = 25/949 (3%) Strand=Plus/Minus Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG-GTGTATTCCAAAATTTC 110345 ||||| || ||||| || ||||| | |||||| | || | | ||||| || | || || Sbjct 1617 GCAATTGATGCAAGGTTACACACGGCAGTCTC-TGTTGGACTTGTGTACTCAATTATCTC 1559 Query 110346 CGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCA 110405 || |||| ||| || |||||| || | || | ||| || ||| ||||| Sbjct 1558 AGTGCACAGGTTTGATGACTTAATTGTGCCAAGATTTTGCTGGTTGCTTTTCCTATTGCA 1499 Query 110406 TGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTT 110465 ||||||||| | |||||||| || | |||||||| |||||||||| | ||| || Sbjct 1498 AGCATCCTTAAAAAGCATGTAAGGATTTCCAGTTTCTATCTGTGACTTCAAAATTGCAAA 1439 Query 110466 CCATACATCGGCGGCGGGGACAG------TTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | | || | ||| |||| || | || ||| || |||| Sbjct 1438 CCAGAGACTTTGTGCTTGAACAACCTTCTTTGCTTTTCC-AGCTCTT-----TCATACTG 1385 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGACCCTTCGCCTTGTCGG 110578 |||||||| | |||| |||| | || | ||| || | | ||| |||| | || Sbjct 1384 GGTGTACAGATTCTCATATTCTTCACCCCA-ACAGTCTGCCAAACCAGGGGCCTCATTGG 1326 Query 110579 GACAGAAGAGGGACCAATTTCCACC-CTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 | || || |||||||||| ||| |||| ||| || | ||| || || ||||| | | Sbjct 1325 GGCAAAACAGGGACCAATCACCATTGCTCCG-AACTCTTTCCATAAAAAGATCAGGCACC 1267 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || | || | || || ||| ||||| | || ||||| | | | Sbjct 1266 CAAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCAAC 1207 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTA 110757 ||||| || || | | ||| | ||||||||||| | || ||||| | | || || Sbjct 1206 TCCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTTTT 1147 Query 110758 C---GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 | | || |||| | |||||| || || ||| ||||||| || | ||||| ||| Sbjct 1146 CTCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTGGA 1087 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTG--GACTTATTGGCACGAATGT 110872 || || |||| || |||||||| || | ||| | | | ||| || | |||| Sbjct 1086 ATGATACCATTAGACGTCCCATTTGTTCCACGAATGTAGCTGCCATAT--GCCCTTATGT 1029 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTG 110932 || | | | |||||| || || || | |||||||| || |||||| | | || Sbjct 1028 TATGAACAGAAACACCAATCCCTCCAGCAGATTTACTAATGACAGCGCACTCTTTCAATG 969 Query 110933 TACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCT 110992 || ||||||| || ||||| ||| | || | || | |||||| | || || Sbjct 968 TATCATAAATCCCTTCAATACTATCATCTTTCATACATATCAAGAAGCAACTACTCAACT 909 Query 110993 GAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGG 111052 |||| | ||| || || |||||||| || || || | |||||| ||||| | || | Sbjct 908 GAGGCCTAGGAGTCCCGGCATTGAAAAGAGTTGGAGAAGCATGAGTGAACCATCTCTGAG 849 Query 111053 ACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAA 111112 ||||| | || || | | ||||| | ||| | |||||| |||| | || Sbjct 848 ACATCAAATGATAAGTCTTAACAGCGGATTCAATATCATGCTTGTGAATCCCAACAGAAA 789 Query 111113 CTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAAC 111172 | | ||| | ||||| ||||||| |||| | | | |||||||| | || ||| Sbjct 788 CCCTCATTATCATATGTTGAGGCCTTTCAACAACAGTCCCATCAACTTTCAACAGATAAG 729 Query 111173 TCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 | |||| ||||| |||| |||||||| || | || ||||| || || Sbjct 728 ACCTCTCAAGGGTTTTGAATCCAAAGTAATCATAGTCAAAATCCCGGTC 680 >seq9379 Length=2098 Score = 91.5 bits (100), Expect = 2e-13 Identities = 249/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 167340 GGGGATGTAGCAACTGAAACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGG 167399 ||| ||||| |||| |||| || ||||| || ||| | || || || | ||||| || Sbjct 1323 GGGAATGTAAGAACTCCAACCTGTCCCAATTCCCTCACTTCCATTGACAAGAACCAAAGG 1382 Query 167400 TAGAGTTGGCATGTAAAAGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAG 167459 || | | ||||| || | | ||||||||||| ||||| |||| ||| || | || Sbjct 1383 TATAATAGGCATATACCAATTTGGTTCAATGGACTTCCCATCCTCATTCAAATATTCAAG 1442 Query 167460 AATGGCATCATCTTTGGGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGAT 167519 || |||||| | || |||||| ||||| || | |||| || |||| Sbjct 1443 AAGTTTATCATCATCCTCATGGAAGAGACATCGAGTAACCGGACTTAGCTCAGTGTAGAT 1502 Query 167520 GTACCTCGTCTGAGAC--GCA---TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCA 167574 ||| |||| || ||| || || ||||||| | || ||||||||||||||| Sbjct 1503 GTA-----TCTGGCACTTGCATGGTCTTTACCACCCAAGTTACGAGTACCAAATTGACCA 1557 Query 167575 CATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATC 167634 ||| | |||||||||||| || || ||| | |||| | |||| | || Sbjct 1558 TTTGGTTTGAGAAGATTGATATTGTTGCTGCCCACAAAATCCTGTGCCATTCCAATAATT 1617 Query 167635 GTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCC 167694 || ||| || ||| || |||||||||||| | |||| |||||| | Sbjct 1618 GTGCTAGCAAGACTTTGTTCACCATGGTGGTAAGCAGAGTGCTCAGACACATAACCGATA 1677 Query 167695 AACTGTGCAACCTTCATCTC 167714 ||||| |||||||| || || Sbjct 1678 AACTGGGCAACCTTAATTTC 1697 >seq9378 Length=3911 Score = 91.5 bits (100), Expect = 2e-13 Identities = 249/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 167340 GGGGATGTAGCAACTGAAACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGG 167399 ||| ||||| |||| |||| || ||||| || ||| | || || || | ||||| || Sbjct 1323 GGGAATGTAAGAACTCCAACCTGTCCCAATTCCCTCACTTCCATTGACAAGAACCAAAGG 1382 Query 167400 TAGAGTTGGCATGTAAAAGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAG 167459 || | | ||||| || | | ||||||||||| ||||| |||| ||| || | || Sbjct 1383 TATAATAGGCATATACCAATTTGGTTCAATGGACTTCCCATCCTCATTCAAATATTCAAG 1442 Query 167460 AATGGCATCATCTTTGGGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGAT 167519 || |||||| | || |||||| ||||| || | |||| || |||| Sbjct 1443 AAGTTTATCATCATCCTCATGGAAGAGACATCGAGTAACCGGACTTAGCTCAGTGTAGAT 1502 Query 167520 GTACCTCGTCTGAGAC--GCA---TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCA 167574 ||| |||| || ||| || || ||||||| | || ||||||||||||||| Sbjct 1503 GTA-----TCTGGCACTTGCATGGTCTTTACCACCCAAGTTACGAGTACCAAATTGACCA 1557 Query 167575 CATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATC 167634 ||| | |||||||||||| || || ||| | |||| | |||| | || Sbjct 1558 TTTGGTTTGAGAAGATTGATATTGTTGCTGCCCACAAAATCCTGTGCCATTCCAATAATT 1617 Query 167635 GTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCC 167694 || ||| || ||| || |||||||||||| | |||| |||||| | Sbjct 1618 GTGCTAGCAAGACTTTGTTCACCATGGTGGTAAGCAGAGTGCTCAGACACATAACCGATA 1677 Query 167695 AACTGTGCAACCTTCATCTC 167714 ||||| |||||||| || || Sbjct 1678 AACTGGGCAACCTTAATTTC 1697 >seq9377 Length=3936 Score = 91.5 bits (100), Expect = 2e-13 Identities = 249/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 167340 GGGGATGTAGCAACTGAAACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGG 167399 ||| ||||| |||| |||| || ||||| || ||| | || || || | ||||| || Sbjct 1348 GGGAATGTAAGAACTCCAACCTGTCCCAATTCCCTCACTTCCATTGACAAGAACCAAAGG 1407 Query 167400 TAGAGTTGGCATGTAAAAGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAG 167459 || | | ||||| || | | ||||||||||| ||||| |||| ||| || | || Sbjct 1408 TATAATAGGCATATACCAATTTGGTTCAATGGACTTCCCATCCTCATTCAAATATTCAAG 1467 Query 167460 AATGGCATCATCTTTGGGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGAT 167519 || |||||| | || |||||| ||||| || | |||| || |||| Sbjct 1468 AAGTTTATCATCATCCTCATGGAAGAGACATCGAGTAACCGGACTTAGCTCAGTGTAGAT 1527 Query 167520 GTACCTCGTCTGAGAC--GCA---TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCA 167574 ||| |||| || ||| || || ||||||| | || ||||||||||||||| Sbjct 1528 GTA-----TCTGGCACTTGCATGGTCTTTACCACCCAAGTTACGAGTACCAAATTGACCA 1582 Query 167575 CATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATC 167634 ||| | |||||||||||| || || ||| | |||| | |||| | || Sbjct 1583 TTTGGTTTGAGAAGATTGATATTGTTGCTGCCCACAAAATCCTGTGCCATTCCAATAATT 1642 Query 167635 GTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCC 167694 || ||| || ||| || |||||||||||| | |||| |||||| | Sbjct 1643 GTGCTAGCAAGACTTTGTTCACCATGGTGGTAAGCAGAGTGCTCAGACACATAACCGATA 1702 Query 167695 AACTGTGCAACCTTCATCTC 167714 ||||| |||||||| || || Sbjct 1703 AACTGGGCAACCTTAATTTC 1722 >seq9376 Length=2123 Score = 91.5 bits (100), Expect = 2e-13 Identities = 249/380 (66%), Gaps = 10/380 (3%) Strand=Plus/Plus Query 167340 GGGGATGTAGCAACTGAAACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGG 167399 ||| ||||| |||| |||| || ||||| || ||| | || || || | ||||| || Sbjct 1348 GGGAATGTAAGAACTCCAACCTGTCCCAATTCCCTCACTTCCATTGACAAGAACCAAAGG 1407 Query 167400 TAGAGTTGGCATGTAAAAGTCGGGTTCAATGGAACGACCATCATCATCCAAGTAGTTGAG 167459 || | | ||||| || | | ||||||||||| ||||| |||| ||| || | || Sbjct 1408 TATAATAGGCATATACCAATTTGGTTCAATGGACTTCCCATCCTCATTCAAATATTCAAG 1467 Query 167460 AATGGCATCATCTTTGGGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGAT 167519 || |||||| | || |||||| ||||| || | |||| || |||| Sbjct 1468 AAGTTTATCATCATCCTCATGGAAGAGACATCGAGTAACCGGACTTAGCTCAGTGTAGAT 1527 Query 167520 GTACCTCGTCTGAGAC--GCA---TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCA 167574 ||| |||| || ||| || || ||||||| | || ||||||||||||||| Sbjct 1528 GTA-----TCTGGCACTTGCATGGTCTTTACCACCCAAGTTACGAGTACCAAATTGACCA 1582 Query 167575 CATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATC 167634 ||| | |||||||||||| || || ||| | |||| | |||| | || Sbjct 1583 TTTGGTTTGAGAAGATTGATATTGTTGCTGCCCACAAAATCCTGTGCCATTCCAATAATT 1642 Query 167635 GTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCC 167694 || ||| || ||| || |||||||||||| | |||| |||||| | Sbjct 1643 GTGCTAGCAAGACTTTGTTCACCATGGTGGTAAGCAGAGTGCTCAGACACATAACCGATA 1702 Query 167695 AACTGTGCAACCTTCATCTC 167714 ||||| |||||||| || || Sbjct 1703 AACTGGGCAACCTTAATTTC 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588426345510200