Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq63568 518 4e-142 seq22106 197 2e-45 seq65592 123 3e-23 seq70055 122 1e-22 >seq63568 Length=1222 Score = 518 bits (574), Expect = 4e-142 Identities = 683/944 (72%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || || Sbjct 1043 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATT 985 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | || || || | || Sbjct 984 ATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGA 925 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | || || ||||| || || |||||||| || |||| | || |||||| Sbjct 924 TCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATC 865 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| ||||| || |||||||| ||| | |||||||||||||| || |||||| Sbjct 864 GGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGT 805 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | |||||||| | Sbjct 804 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGT 745 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | || ||||| |||||||| ||||||||| || || Sbjct 744 GAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCT 685 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| || || ||||| | |||||| ||||||| || || || Sbjct 684 CCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCA 625 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||||| ||||| |||||||||||||||||| | || || || || ||| Sbjct 624 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAG 565 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 ||||| ||||| ||||| || || |||||| ||| ||||| || | ||||| || || Sbjct 564 CATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCC 505 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 ||||| || ||||| ||||| | || ||||| | | ||||| ||||| ||||| Sbjct 504 CTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 445 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | ||||| ||||| |||||||| || || || ||| Sbjct 444 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTA 385 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || |||||||| ||||| || | |||||||| |||||| |||||||| || | Sbjct 384 GCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGC 325 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| ||||||||||| | || ||||| ||| || | ||||| ||| | | ||| Sbjct 324 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 265 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 ||| |||| ||||| ||||| || ||||||||||| ||||||||||| || |||||| | Sbjct 264 ATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGT 205 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || |||| |||| || | ||| | || ||| | ||||||||| Sbjct 204 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAA 145 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384 |||||||||||| | ||||| || || ||||| ||||||||||| Sbjct 144 GTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGC 101 >seq22106 Length=3637 Score = 197 bits (218), Expect = 2e-45 Identities = 470/704 (67%), Gaps = 30/704 (4%) Strand=Plus/Minus Query 154441 GTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTG 154500 ||||| | |||||||| ||| |||||||| | |||||| || | ||| | ||||| | Sbjct 1773 GTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCAACAACTGAAATGATGCCGG 1714 Query 154501 TGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTA-TGATACAGACCATGGGT 154559 || ||||| ||| | | |||| || |||| | ||| |||| | || Sbjct 1713 TGACATGGCCTAGCTTTACCGATTTGCACCCTTTCGCACCAACTGA-ACAGGCTCAAGGA 1655 Query 154560 TATCAGAAAATTATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCT 154619 |||||| |||| | | ||||| | ||| ||| ||||| || ||||| || Sbjct 1654 TATCAGGAAATGTTCGCCAACTTAGGTGACCTGTTGTGTACCATCACTGGATTTGACTCC 1595 Query 154620 ATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAA 154679 | || || ||||| || || || | || || ||||| ||||| | | || | Sbjct 1594 TTCTCTTTGCAACCAAATGCCGGTGCTGCTGGAGAATATGCTGGACTCATGGTTATTCGT 1535 Query 154680 GCATACCAT----CAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTC 154735 ||||| ||| |||| ||| || | | | || || || | ||||||| || Sbjct 1534 GCATATCATTTGTCAAG----AGGGGACCACCACCGCAACGTTTGCATTATACCAGCATC 1479 Query 154736 AGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAA 154795 ||||||||| || |||||||||||||||| |||| || |||||| |||| | || Sbjct 1478 AGCACATGGTACAAATCCTGCTAGTGCTGCTATGGTTGGAATGAAAATTGT---TACCAT 1422 Query 154796 GTG---TGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGC-------AA 154845 | ||||| | | || ||||| |||| |||| | ||||||||| || Sbjct 1421 AGGAACTGATGCTAAGGGAAACATTAACATTGAAGAGTT---GAAGAAAGCTGCTGAAAA 1365 Query 154846 TCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTAT 154905 ||| | ||| | | ||| ||| ||||| | ||||| || || || |||||||| | Sbjct 1364 ACATAAGGACAACTTATCTG-CAT---TTATGGTAACATATCCTTCAACTCATGGTGTTT 1309 Query 154906 TTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATC 154965 |||| ||| | || || ||||| | ||||| |||||||| || || || Sbjct 1308 ATGAAGAAGGTATTGATGATATTTGCAAGATTATCCATGATAATGGTGGCCAAGTGTACA 1249 Query 154966 TTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAG 155025 | ||||| || || | ||||||||||||||||| ||| ||| || | ||| || | Sbjct 1248 TGGATGGTGCCAACATGAATGCACAGGTAGGACTTACAAGTCCAGGTTGGATTGGAGCCG 1189 Query 155026 ATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTG 155085 |||| || ||||| || | ||||| ||||| || ||||| || ||||| ||||| |||| Sbjct 1188 ATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATTCCTCACGGAGGAGGAGGCCCTG 1129 Query 155086 GCGTAGGTCCTATAGGTGTAGCAAAACATCTCACACCATTTGTA 155129 || | |||||||| |||||| ||||| | |||||||| || Sbjct 1128 GCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTA 1085 Score = 154 bits (170), Expect = 2e-32 Identities = 207/286 (72%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 153732 GGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 153791 ||||||| ||| |||||||| ||| ||| || || |||||| |||| ||||| Sbjct 2506 GGTGAGTTTGGAGCTGATATTGTTGTTGGTTCGGCTCAGAGATTTGGTGTTCCGATGGGT 2447 Query 153792 TATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 153851 ||||| ||||| |||||||| ||||| || || | | |||||||||| | ||| ||| Sbjct 2446 TATGGTGGTCCCCATGCTGCTTTCTTGGCTACTTCGCAAGAGTATAAGAGGATGATGCCT 2387 Query 153852 GGCAGAATTGTAGGTC--AGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCAC 153909 || ||||| | ||| ||| || ||| || || |||| | || | || Sbjct 2386 GGAAGAATCATCGGTGTTAGT--GTTGATTCGTCTGGAAAGCAAGCTTTGAGGATGGCTA 2329 Query 153910 TACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTC 153969 | || ||||| |||||||||||| | || ||||| || ||||| ||||| ||||| |||| Sbjct 2328 TGCAAACTAGGGAGCAGCATATCCGTAGGGACAAGGCCACCAGCAACATTTGCACTGCTC 2269 Query 153970 AGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 |||||||||| || || ||| ||| | ||||| | ||||||||| Sbjct 2268 AGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGG 2223 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 ||||||||| |||||| ||| || || || ||||||||||||||||| || || | Sbjct 2971 GAGAATCCTGCTTGGTATACACAGTATACGCCTTATCAAGCTGAGATATCGCAAGGCCGT 2912 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 | || |||| || |||| ||||| |||| || || || || || || || || | Sbjct 2911 CTTGAGTCTTTGTTGAATTTTCAAACCATCATTACTGATCTCACTGGTTTGCCTATGTCG 2852 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG-CTATTAGCATATAA 153442 || || || | | ||||||| ||||| || || ||||||||| |||| | | |||| Sbjct 2851 AATGCTTCATTGCTTGATGAAGGTACTGCTGCTGCGGAAGCAATGTCTATGTGTA-ATAA 2793 Query 153443 TTCTACAAGAGATAAGAAGA 153462 | | || | |||||||| Sbjct 2792 TATTCAAAAGGGTAAGAAGA 2773 >seq65592 Length=292 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171366 GTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCA 171425 || ||||| || || ||||| | || || || ||||| |||||||| || | |||||| Sbjct 15 GTCGGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCA 74 Query 171426 GAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 171485 ||||| || || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 75 GAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGT 134 Query 171486 GCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTA 171545 || |||||| | | || || || ||||| ||| | ||||||| || || || || Sbjct 135 GCGTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTA 194 Query 171546 CCAAGAGGTAACGCACTTTAA 171566 ||| | || ||||| |||||| Sbjct 195 CCACGTGGAAACGCTCTTTAA 215 >seq70055 Length=284 Score = 122 bits (134), Expect = 1e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | || ||||||||| ||| || |||||||| || | || ||||| ||| Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | ||||| || || | | | || ||||||||| ||| || ||||| Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| ||||| | || || ||| | || || ||||||||| || Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 170709 ACAGCAGCAGTTTCCACACCTG 170730 || |||||||| || || |||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTG 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578672256894560