Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq63568 486 2e-132 seq22106 190 2e-43 seq65592 141 1e-28 seq70055 125 8e-24 >seq63568 Length=1222 Score = 486 bits (538), Expect = 2e-132 Identities = 698/984 (71%), Gaps = 0/984 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | || |||||||| || ||| Sbjct 1023 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 964 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || ||| | || ||| | | || || ||||| Sbjct 963 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 904 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || || ||| | ||||| ||||| || Sbjct 903 ATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATA 844 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| |||| ||||||||||| |||||||||||||||||| | | | | Sbjct 843 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTT 784 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | Sbjct 783 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 724 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||||||||| || || |||| || ||| Sbjct 723 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCA 664 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| | ||||| || || || ||||||||||| ||||| ||| Sbjct 663 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATC 604 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || || || || |||||||| ||||| ||||| || Sbjct 603 TCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCA 544 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||||||| Sbjct 543 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGT 484 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || || ||| ||||| || | || Sbjct 483 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 424 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 |||| ||||| ||||| |||||||| || || || ||||| || |||||||| ||||| Sbjct 423 TACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTATTTTGGC 364 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| ||||||||| || | | | || ||||||||||| Sbjct 363 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGCT 304 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| || | ||||| ||| | | |||||| | || ||||| ||||| Sbjct 303 GCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAAT 244 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 | || |||||||| || |||||||| || || ||| | | ||| | || ||| Sbjct 243 TTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 184 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| || ||||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 183 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 124 Query 172780 CACAACTTCCCATTAGACCTTGCT 172803 || || ||||| ||||||| ||| Sbjct 123 CATAATTTCCCTCTAGACCTAGCT 100 >seq22106 Length=3637 Score = 190 bits (210), Expect = 2e-43 Identities = 516/783 (66%), Gaps = 30/783 (4%) Strand=Plus/Minus Query 159037 TTTAAAAAATATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAA 159096 ||||| | || || | |||| ||| || |||| || || | | || ||||||| Sbjct 1852 TTTAACACGTACCAAACTGAGCATGAGTTGCTGAGGTACATTCAAAGGCTACAATCAAAA 1793 Query 159097 GATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCA 159156 ||| | ||| | | ||||| | |||||||| |||||| ||||| || || ||| Sbjct 1792 GATCTTTCACTTTGCCACAGTATGATCCCACTTGGATCTTGTACAATGAAGCTGAATGCA 1733 Query 159157 GCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCT 159216 || | ||| ||||||| ||| ||||| ||| | | |||| || |||| Sbjct 1732 ACAACTGAAATGATGCCGGTGACATGGCCTAGCTTTACCGATTTGCACCCTTTCGCACCA 1673 Query 159217 A-TGATACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATGTGA 159275 | ||| |||| | || ||||| |||| | | ||||| | ||| ||| Sbjct 1672 ACTGA-ACAGGCTCAAGGATATCAGGAAATGTTCGCCAACTTAGGTGACCTGTTGTGTAC 1614 Query 159276 TATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGC 159335 ||||| || ||||| || | || || ||||| || || || | || || ||||| Sbjct 1613 CATCACTGGATTTGACTCCTTCTCTTTGCAACCAAATGCCGGTGCTGCTGGAGAATATGC 1554 Query 159336 AGGACTGTTAGCAATCCAAGCATACCAT----CAAGGATCAGGAGATGATAAAAGAAATG 159391 ||||| | | || | ||||| ||| |||| ||| || | | | || | Sbjct 1553 TGGACTCATGGTTATTCGTGCATATCATTTGTCAAG----AGGGGACCACCACCGCAACG 1498 Query 159392 TATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGA 159451 | || | ||||||| ||||||||||| || |||||||| || | |||| || | Sbjct 1497 TTTGCATTATACCAGCATCAGCACATGGTACAAATCCTGCTAGTGCTGCTATGGTTGGAA 1438 Query 159452 TGAAAGTTGTAGGTGTCAAGTG---TGATGATGATGGCAACATAGACATCAAAGATCTAG 159508 ||||| |||| | || | ||||| | | || ||||| |||| |||| | Sbjct 1437 TGAAAATTGT---TACCATAGGAACTGATGCTAAGGGAAACATTAACATTGAAGAGTT-- 1383 Query 159509 AGAAGAAAGC-------AATCATGAATACATTTGAACTGTCATGTATTATGATTACATAT 159561 ||||||||| || ||| | ||| | | ||| ||| ||||| | |||||| Sbjct 1382 -GAAGAAAGCTGCTGAAAAACATAAGGACAACTTATCTG-CAT---TTATGGTAACATAT 1328 Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAG 159621 || || || |||||||| | |||| | || | || || |||||| | ||||| Sbjct 1327 CCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGATATTTGCAAGATTATCCATGAT 1268 Query 159622 AATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAA 159681 |||||||| || || || | |||||||| || | |||||||||||||| || ||| Sbjct 1267 AATGGTGGCCAAGTGTACATGGATGGTGCCAACATGAATGCACAGGTAGGACTTACAAGT 1208 Query 159682 CCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 ||| || ||| || ||||| || ||||| || | ||||||||||| || ||||| Sbjct 1207 CCAGGTTGGATTGGAGCCGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATTCCT 1148 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTT 159801 || ||||| ||||| |||||| | ||||||||||||||| ||||| | |||||||| Sbjct 1147 CACGGAGGAGGAGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTT 1088 Query 159802 GTA 159804 || Sbjct 1087 TTA 1085 Score = 136 bits (150), Expect = 5e-27 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466 ||||||| ||| ||| |||| ||| ||| || || |||||| |||| ||||| Sbjct 2506 GGTGAGTTTGGAGCTGATATTGTTGTTGGTTCGGCTCAGAGATTTGGTGTTCCGATGGGT 2447 Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526 || || ||||| |||||||| ||||| || || | | |||||||||| | ||| ||| Sbjct 2446 TATGGTGGTCCCCATGCTGCTTTCTTGGCTACTTCGCAAGAGTATAAGAGGATGATGCCT 2387 Query 158527 GGCAGAATTGTAGGTC--AGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCAC 158584 || ||||| | ||| ||| || ||| || || |||| | || | || Sbjct 2386 GGAAGAATCATCGGTGTTAGT--GTTGATTCGTCTGGAAAGCAAGCTTTGAGGATGGCTA 2329 Query 158585 TACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCAC 158644 | || ||||| |||||||||||| | || ||||| || ||||| ||||| ||||| || | Sbjct 2328 TGCAAACTAGGGAGCAGCATATCCGTAGGGACAAGGCCACCAGCAACATTTGCACTGCTC 2269 Query 158645 AAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGG 158690 | |||||||| || || ||| ||| | ||||| | ||||||||| Sbjct 2268 AGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTATATCATGG 2223 Score = 86.0 bits (94), Expect = 7e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 ||||||||| |||||| ||| || || || ||||||||||||||||| || || | Sbjct 2971 GAGAATCCTGCTTGGTATACACAGTATACGCCTTATCAAGCTGAGATATCGCAAGGCCGT 2912 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 | || |||| || |||| ||||| |||| || || ||||| || | || || | Sbjct 2911 CTTGAGTCTTTGTTGAATTTTCAAACCATCATTACTGATCTCACTGGTTTGCCTATGTCG 2852 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || | | ||||||| ||||| || || ||||||||| Sbjct 2851 AATGCTTCATTGCTTGATGAAGGTACTGCTGCTGCGGAAGCAATG 2807 >seq65592 Length=292 Score = 141 bits (156), Expect = 1e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 173788 GTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCA 173847 || ||||| || || ||||| | || || |||||||| |||||||| || | |||||| Sbjct 15 GTCGGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCA 74 Query 173848 GAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGA 173907 |||||||| || || |||||||||||||| || ||||| || | || |||||||| | Sbjct 75 GAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGT 134 Query 173908 GCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTA 173967 || |||||| | || |||||| || ||||| ||| | |||| || || || || || Sbjct 135 GCGTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTA 194 Query 173968 CCAAGAGGTAACGCACTTTAA 173988 ||| | || ||||| |||||| Sbjct 195 CCACGTGGAAACGCTCTTTAA 215 >seq70055 Length=284 Score = 125 bits (138), Expect = 8e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || ||||| || || | || ||||| ||| Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | ||||| || || || | | || ||||||||| ||| || ||||| Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | ||| ||| ||| | ||||| ||||| ||| Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 173131 ACAGCAGCAGTCTCCACACCTG 173152 || ||||||||||| || |||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTG 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587502408568240