Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq63568 531 6e-146 seq67767 114 1e-20 seq65592 96.9 4e-15 seq70055 93.3 5e-14 >seq63568 Length=1222 Score = 531 bits (588), Expect = 6e-146 Identities = 704/970 (73%), Gaps = 8/970 (1%) Strand=Plus/Minus Query 162412 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 162471 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 1056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 997 Query 162472 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 162530 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 996 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 938 Query 162531 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 162590 || || |||| || || | || || ||||| || || |||||||| || |||| | Sbjct 937 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 878 Query 162591 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 162650 ||| || || ||| | ||||| || || || |||||||| ||||| ||||||| || Sbjct 877 TTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGATGAATG 818 Query 162651 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGC 162710 | | || || |||||||||| |||| | || | |||||| | | || | | Sbjct 817 GTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 758 Query 162711 CTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGC-G 162769 |||||||| ||||| |||||||| || ||||| |||||||| || ||||| ||| | Sbjct 757 TTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGAT-TGCTG 699 Query 162770 TAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTC 162829 | ||||| || || || || ||||| || | ||||| ||| || |||| || | |||| Sbjct 698 TTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTC 639 Query 162830 AAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTG 162889 |||| || || || | ||||| | || ||| |||||| ||||||| ||| ||| Sbjct 638 AAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTG 579 Query 162890 TCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTG 162949 | || || || ||||| || ||||| ||||| || || |||||||| ||||| || |||| Sbjct 578 TATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTG 519 Query 162950 TCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCC 163009 | ||||| || || || |||||||| ||||||||||| ||||| || ||| | || Sbjct 518 TATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCA 459 Query 163010 GTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGA 163069 | || || || |||| ||| || || | ||||||| ||||||||||| ||||| | Sbjct 458 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 399 Query 163070 CATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 163129 | || || || || || || || ||||| || || || ||||||||||||||||| | Sbjct 398 CCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 339 Query 163130 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 163189 ||||||| || || || || || |||||||| ||||| |||||||| || || ||||||| Sbjct 338 TCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGT 279 Query 163190 TCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCA 163247 | ||||| | || | ||| || ||||| ||||| | || |||||||| || ||||| Sbjct 278 TTACCGCGTTAGG--TATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAACCA 221 Query 163248 GTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGC 163307 || | ||||| |||| |||||||| | || |||||||| || || | |||||||| Sbjct 220 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGC 161 Query 163308 AGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGC 163367 | ||||||||||||||||| || || |||||||| || ||||| || ||||| || Sbjct 160 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTAGC 101 Query 163368 AGCTGCCGAG 163377 || | |||| Sbjct 100 TGCAGTCGAG 91 >seq67767 Length=213 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 163876 GATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCC 163935 ||||| ||| ||| ||| | || || || |||| |||||| || || ||||| || Sbjct 3 GATTTTACCCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCT 62 Query 163936 TTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG-CCTGATTGGAATCAG 163994 || | | || ||||| ||| | || ||||||||||||||||| ||| || | | | Sbjct 63 TTCGGATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCAATTGCG 121 Query 163995 ACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCAT 164054 || || ||||| || || ||||| ||||| |||||||| || ||| |||||| || || Sbjct 122 GCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGAT 181 Query 164055 CTACCCTCTGGGTCAATCAAGTTGGTTCTT 164084 || || ||||| || || |||||||||| Sbjct 182 TTATCCACTGGGCCAGTCTGGTTGGTTCTT 211 >seq65592 Length=292 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 164440 GGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAA 164499 || || || || || || ||||| || || ||||| |||||| || | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 164500 GATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCA 164559 |||||||| || ||||||||||| ||||| || || | || |||||||| | ||||| Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 164560 TGGTTAGCACCAGTTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGC 164617 ||| | || | || |||| || || ||| || | ||||| || || || || | Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTAC 195 Query 164618 CGAGAGGTAATGCGCTTTAAT 164638 | | || || || ||||||| Sbjct 196 CACGTGGAAACGCTCTTTAAT 216 >seq70055 Length=284 Score = 93.3 bits (102), Expect = 5e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || ||||| || ||| | |||||||| || Sbjct 242 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTGGGTTGGTCCGGT 183 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| || ||| | || | || || ||| | || ||||| || || Sbjct 182 CTATTGCTCTTTCCTTGCGCCTATTTTGCCGTGGGGGGTTGGTTCACAGGTACCACCTTT 123 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCTC 163800 || || || ||||| || |||||| |||||| ||||||| | || ||| ||| || | Sbjct 122 GTAACTTCATGGTATACTCATGGATTGGCAAGTTCCTATTTGGAAGGTTGTAACTTCTTA 63 Query 163801 ACAGCGGCTGTGTCAACGCCTGCT 163824 || || || || || || |||||| Sbjct 62 ACTGCAGCAGTCTCTACTCCTGCT 39 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557063641701800