Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq63568 509 2e-139 seq11671 91.5 2e-13 seq11670 91.5 2e-13 >seq63568 Length=1222 Score = 509 bits (564), Expect = 2e-139 Identities = 692/965 (72%), Gaps = 0/965 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 1062 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 1003 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||| ||||| ||||| || ||||| || || || Sbjct 1002 GCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATT 943 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || | Sbjct 942 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATT 883 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 882 CCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 823 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||||||||| |||| |||| || | | |||||| | ||||| | Sbjct 822 GAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 763 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 762 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 703 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || || || | ||||| |||||| ||| | | || ||| | Sbjct 702 GCTGTTGCATATTCAGCTCCCGTCGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATT 643 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || ||||||||||| || ||||||| ||| Sbjct 642 GGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 583 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||||||||| |||||||||||||| ||| Sbjct 582 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCACCCATTTCACATGTTAGGTGTAGCT 523 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| || || | ||| ||| ||||||||||| | || || ||| | | Sbjct 522 GGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 463 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| |||||||| Sbjct 462 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 403 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| |||||||| ||||| || | ||||||||||| || Sbjct 402 GAAACCTATAATATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 343 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | ||||| Sbjct 342 AGTTTCAACAATTCTCGCTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 283 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || |||||||| ||||| | || |||||||| || ||| Sbjct 282 TGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAATTTAAATGGTTTCAATTTTAAC 223 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || ||||| || || ||| || ||| ||| ||||| || || ||||| | Sbjct 222 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGT 163 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| || ||||| ||||| | Sbjct 162 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGACCTA 103 Query 216275 GCTGC 216279 ||||| Sbjct 102 GCTGC 98 >seq11671 Length=1622 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/253 (68%), Gaps = 9/253 (4%) Strand=Plus/Plus Query 201232 CATAACATTTTTGGTCCTGAAGGGACTTGGGATGGCGGAAAAGAAAAAGCCCCTGCAGCC 201291 |||||||| | ||||||| || || ||| | || |||| || || || ||||| || Sbjct 719 CATAACATATATGGTCCTTTTGGTACATGGAAAGGTGGAAGGGAGAAGGCTCCTGCTGCT 778 Query 201292 ATCTGTAGGAAGGTCGCATCTCTACCAGAAACAGGAGGCACCATTGAGGTGTGGGGAGAC 201351 | ||| |||| | || ||| || | | | ||| ||||| |||||||||| Sbjct 779 TTTTGTCGGAAAG-CG-ATCACTTCTACAGACAAAT-------TTGAGATGTGGGGAGAT 829 Query 201352 GGTTTGCAAACTAGATCGTTCCTTTACATTGATGAGTGTATCGAAGCAACTCGTAGGTTG 201411 |||||||||||| |||| ||| | ||||||||||||| | |||| | | | || Sbjct 830 GGTTTGCAAACTCGATCATTCACATTCATTGATGAGTGTGTTGAAGGTGTACTTCGACTG 889 Query 201412 ATTGATTCTGACTTTGAAGGACCTGTAAACATTGGTTCTGAAGAGATGGTCACTATCAAT 201471 | | | || ||||| | || ||||| ||||| ||| || ||||||| || ||| Sbjct 890 ACTAAATCCGACTTCCGTGAGCCGGTAAATATTGGAAGTGATGAAATGGTCAGCATGAAT 949 Query 201472 GAGTTGGTAGAGA 201484 ||| ||| |||| Sbjct 950 GAGATGGCTGAGA 962 >seq11670 Length=1554 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/253 (68%), Gaps = 9/253 (4%) Strand=Plus/Plus Query 201232 CATAACATTTTTGGTCCTGAAGGGACTTGGGATGGCGGAAAAGAAAAAGCCCCTGCAGCC 201291 |||||||| | ||||||| || || ||| | || |||| || || || ||||| || Sbjct 719 CATAACATATATGGTCCTTTTGGTACATGGAAAGGTGGAAGGGAGAAGGCTCCTGCTGCT 778 Query 201292 ATCTGTAGGAAGGTCGCATCTCTACCAGAAACAGGAGGCACCATTGAGGTGTGGGGAGAC 201351 | ||| |||| | || ||| || | | | ||| ||||| |||||||||| Sbjct 779 TTTTGTCGGAAAG-CG-ATCACTTCTACAGACAAAT-------TTGAGATGTGGGGAGAT 829 Query 201352 GGTTTGCAAACTAGATCGTTCCTTTACATTGATGAGTGTATCGAAGCAACTCGTAGGTTG 201411 |||||||||||| |||| ||| | ||||||||||||| | |||| | | | || Sbjct 830 GGTTTGCAAACTCGATCATTCACATTCATTGATGAGTGTGTTGAAGGTGTACTTCGACTG 889 Query 201412 ATTGATTCTGACTTTGAAGGACCTGTAAACATTGGTTCTGAAGAGATGGTCACTATCAAT 201471 | | | || ||||| | || ||||| ||||| ||| || ||||||| || ||| Sbjct 890 ACTAAATCCGACTTCCGTGAGCCGGTAAATATTGGAAGTGATGAAATGGTCAGCATGAAT 949 Query 201472 GAGTTGGTAGAGA 201484 ||| ||| |||| Sbjct 950 GAGATGGCTGAGA 962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744386261910320