Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq63568 562 9e-156 >seq63568 Length=1222 Score = 562 bits (622), Expect = 9e-156 Identities = 716/986 (73%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 35970 GCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAG 36029 || |||||||| || ||||| || || || ||||| ||||||||||||||||| || | | Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 36030 TCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACT 36089 | |||||||||| ||| |||||||| || | || | || | |||||| || Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 36090 GACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTA 36149 || || || || || || || || | ||| |||||||||||| || || | |||||| Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 36150 AGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTA 36209 | ||| || | || ||||||||||| ||||||||||||||| ||| ||| || Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 36210 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 36269 || |||||||| |||||||| | || ||||| || || ||||| || ||||| ||||| Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 36270 GTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCA 36329 || ||||| ||||| |||||| | || || | || ||||||| | || ||||| Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 36330 CGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 36389 | || | ||||| || | |||||||||||| ||||| | || |||||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 36390 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 36449 || || || ||||| | ||| || || || |||||||| ||||| || || |||||||| Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 36450 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 36509 |||| |||||| |||||||| || || || || |||||||||||||| || || || ||| Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCT 637 Query 36510 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 36569 || |||| ||||||| ||||| || ||| || ||||| || || |||||||| || Sbjct 638 TGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCGACGGGAGCTGAATATGCA 697 Query 36570 ACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAA 36629 ||| ||||| || | |||||| || | | ||||||||||||| | || |||| |||| Sbjct 698 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 757 Query 36630 GCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 36689 | | ||||| | ||||| | ||||| |||| ||| || || || || |||||| Sbjct 758 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAAC 817 Query 36690 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGAT 36749 || || || | || |||||||||||| || ||||| ||||| | |||||| || || Sbjct 818 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 877 Query 36750 GATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGC 36809 | || | || || ||||| || || |||||||| || |||| | ||| || |||||| Sbjct 878 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 937 Query 36810 TCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTC 36869 |||||||||||||| ||||| || ||||| ||||||| || || || | |||| | | Sbjct 938 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAA 997 Query 36870 ACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTG 36929 ||| || || | | ||||||||| | || |||||||| || | || || ||||| Sbjct 998 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 1057 Query 36930 TTTGTACTTGTAACCCAGTCACATAA 36955 | || || || | ||||| ||| || Sbjct 1058 TCAGTGCTGGTTATCCAGTTACAGAA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150321010796286