Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq63568 544 2e-150 >seq63568 Length=1222 Score = 544 bits (602), Expect = 2e-150 Identities = 719/991 (73%), Gaps = 10/991 (1%) Strand=Plus/Plus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || ||||| || || ||||| || |||||||| ||||| ||||| ||||||||||||||| Sbjct 98 GCAGCTAGGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 157 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || |||||||| | | ||| ||||| || || | | ||| | ||||| || Sbjct 158 TTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACA 217 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || || || || || || | ||| |||||||||||| ||| || | | |||| Sbjct 218 GATTGGTTAAAATTGAAACCATTTAAATTGAAAGCCATAGTGCTGATACCTAACGCGGTA 277 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| || |||||| Sbjct 278 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAGCGAGAATTGTTG 337 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || |||||||| |||||||| | || ||||| || || ||||| || ||||| ||||| Sbjct 338 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAATATTATAG 397 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 398 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 457 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | || ||||||||| ||| | | || |||||| Sbjct 458 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 517 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || || |||||||| ||||| || || ||||| ||| Sbjct 518 ACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATATTATGCTCAGCCTGAAAT 577 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTC 5729 || | ||||||||| |||||||||||||| || ||||||||||||| |||||| |||| Sbjct 578 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCAT--CTGAAAAGCTTC 635 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | ||||| | || || |||| |||| || || || || || ||||||||| Sbjct 636 CTTGACCAATTGGGTAGATCAAGAAAACTGCAGTA-GCAGCTGCGACGGGAGCTGAATAT 694 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || || |||||| || ||||| || | | ||||||||||||| | || |||| | Sbjct 695 GCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 754 Query 5849 TAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAA 5908 ||| || | ||||| | |||||| | || | |||| || || || |||||||| Sbjct 755 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTAT 814 Query 5909 AGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGT 5966 | ||||||||| | ||| || |||||||| || || || ||||| || || || || Sbjct 815 AACCATTCATCAACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCG 872 Query 5967 TGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGA 6026 || | || | || ||| || || || || |||||||| || ||||||||||| | | Sbjct 873 CAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAA 932 Query 6027 CGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATG 6086 | || ||||| || || || || || ||||| || ||||| | ||| || | |||||| Sbjct 933 CAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATA 992 Query 6087 CAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGC 6146 ||| ||||||||| || | | || ||||| || ||||||||||| || | || || | Sbjct 993 CAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGAC 1052 Query 6147 GGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 |||| | ||||| || | ||||| |||||| Sbjct 1053 GGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152514264585474